Silkworm Genome Informatics Database

Gene

KWMTBOMO12896

Pre Gene Modal

BGIBMGA012689

Annotation

PREDICTED:_uncharacterized_protein_LOC106143543_[Amyelois_transitella]

Location

Bomo_Chr22(-):3687408-3691340 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.718

CDS

ATGGAACGTGCTACTGGAACCGAAGTGTACGGGTGTGGCTCTACCCAAAGCACGGACATAACTTTGAATATACATACCACCACGGGTGGTAATTTTTCCGTGAGTTTGAACGGCAAAAGCACCGTCGAGCATCTAAAGAAACTAGTTTCAAAGAAACTAAAGGTGTCAAAGGATCGAATATGCTTACTACATCGCGAGAGACAATTGAGGGACGGCACGTTGGAAGAAAATGGACTGATGGACGGGTCGCGGGTCATCCTACTACCAAGCGTCGAGACCGGATTGCTGAGTCAAAGACCCGAGAATACAGTGATGCAAGCATTAGAGTCCTTGAATGACACCCAAGTCAATGATTTCTTGAGTGGTAAATCACCATTAAATTTGACAATGCGCTTGGGAGATCACATGATGTTGATACAACTTCAGCTATCTACCCTACACTCCAGTTCTTGTCCTAGATCTTTAAGGAATTCTGCAGCTGCAAAAACCTCTTCAACTTCTCAGCAGGCAGCAAGTGATAATAAGGATAGTAAGGATTCTAACCATCAAAATAACACACAAAAATCTGAGCCAGAGACCAACAGTCCTGAAAAAGAAAAAAGTAATCCTGATCTACAAACACATGTGTTCCAAAAACATGATTTAGAGTTATTACAGAATGCCTTTGATCTATATCGCTCTATGGCTGAAGAGAAATATGCAAATGCTACAAAAACAGAAGCAAAAAATGACAAAACTGAATCATTAGACGGAACTAACTGTACTATACCAGATTTGTCGAACATAACTGTAGAAAATGACCAATCACCAATTAAATCACTCTCCAACATGGTGTCTAGTCCTATTGATACTTCTGCTACACCTACAACAGAAACTAGAGATATGTCAATTGTTAATTCTGTTAAAAGTAATTTACTGGAGTTACTATCACAAAACAAATCAAATAGTGAACCTGTCCCATCAACAAGTGGTATGACTGATAAAGCATGTCCTTCAACATCATCACATGCATCTGATAGTTCATTTAGTGATGACAATGACAATTTCACTGACCAAAGCTCGTTTCTTGCTGAGAGTACAATAGATGAATATCCTATGGAAAATCTCTTCAACAGTGCTGTAGACAAAGGCTTGTTTGGAGACCAAGATGAATGTATGTTGGATAGAGAGATTTCAAATTTGGCAACTACTAGTCATGGACAGGCATCAAACACAGGCACATTGCCTTCCTTTCAGAGTTTAAATGAGCCATTGAAAAATAAGAGATTCCAATATTTACTTCATAAAACTTCCAAATTTAAACATCCCATAGGACAAAATAAACAAAGAGCCTTCATGCAGTCTGTTGTAAACAAACACAAGAAGAGAATGCAATCTAGACAAGATAATATAGCAGCTCAACCTTCAACATCTCGAACAGAACCATATATAACAAACCCAAGGAAACTTATACTACAGCCAAGCAACAGCAATGCCGACGATCAAGCCACTCCTTCTACGTCTAAACAAATATCCTTCAGACCCCCTGATGCGCCAAAAAAGCCTGCTAGAGTGTTGCCCACACCCACAGTAGATACTAAAGCACTAATAGAGGCCTCAAAGAATTTGACTCAGAAACTGAAAAAGTTGTCAAAGGAAGTGTTAACAAACAAAATTGATCTCAGAACTGCCGAAGAGACTATGCGGTCCAAGATTGGCCCTGGTGCTGTGATAGAGTCCATGAAACATCATGGCAAAGGAATATATTCAGGAACTTTCTCAGGAACGCTCAATCCTGCACTTCAGGACAGATATGGACGACCAAAGAGAGATATATCTACAATTATACATATTCTGAATGATTTATTATGTGCAACTCCACCTATTGCTTTAGCTCAGAAGGATCCCAGTCACTCCTGTGCTAGTACTGAAGAACAAACCAAATGTGTAGGGTGCAGTCAACCTTCATGCTTATATGGACAATGCGACGGTCACCTACCTTCCACATCCACCGACAAAAAAGACTGTTCATGCAAACTGACACACTGTCAGTGCATTAGACTCGCTCCTGTCGCCTGCGCCAGTTGCGTCACTAAGACCCCCGATGAAATATGCAAGAAATGCGACACAGCTAAAGCTCTAGCCATTGAAAACTCAAAGACAAAGTGCAAACTAGAACAATTAAGGCTCGTAATGCAACAGAAGAAACAGAGACGAGAGGCGAGAAAGTTAAAGACGATGCCTTATGCAAATACAGCCCCCAAAGCAATCTCTTCCCCGGAACAGCCACCTGTTATAAAAGAAGAAATCGAAACAGTTGCCTAA

Protein

MERATGTEVYGCGSTQSTDITLNIHTTTGGNFSVSLNGKSTVEHLKKLVSKKLKVSKDRICLLHRERQLRDGTLEENGLMDGSRVILLPSVETGLLSQRPENTVMQALESLNDTQVNDFLSGKSPLNLTMRLGDHMMLIQLQLSTLHSSSCPRSLRNSAAAKTSSTSQQAASDNKDSKDSNHQNNTQKSEPETNSPEKEKSNPDLQTHVFQKHDLELLQNAFDLYRSMAEEKYANATKTEAKNDKTESLDGTNCTIPDLSNITVENDQSPIKSLSNMVSSPIDTSATPTTETRDMSIVNSVKSNLLELLSQNKSNSEPVPSTSGMTDKACPSTSSHASDSSFSDDNDNFTDQSSFLAESTIDEYPMENLFNSAVDKGLFGDQDECMLDREISNLATTSHGQASNTGTLPSFQSLNEPLKNKRFQYLLHKTSKFKHPIGQNKQRAFMQSVVNKHKKRMQSRQDNIAAQPSTSRTEPYITNPRKLILQPSNSNADDQATPSTSKQISFRPPDAPKKPARVLPTPTVDTKALIEASKNLTQKLKKLSKEVLTNKIDLRTAEETMRSKIGPGAVIESMKHHGKGIYSGTFSGTLNPALQDRYGRPKRDISTIIHILNDLLCATPPIALAQKDPSHSCASTEEQTKCVGCSQPSCLYGQCDGHLPSTSTDKKDCSCKLTHCQCIRLAPVACASCVTKTPDEICKKCDTAKALAIENSKTKCKLEQLRLVMQQKKQRREARKLKTMPYANTAPKAISSPEQPPVIKEEIETVA

Uniprot

H9JT27 A0A2H1UZX4 A0A2A4JB87 A0A2W1B5M9 A0A0N1IBM8 A0A194Q9D5 + More
A0A212FCY0 A0A0L7L9K0 A0A1E1WAY1

Pubmed

19121390 28756777 26354079 22118469 26227816

EMBL

BABH01030658 ODYU01000045 SOQ34153.1 NWSH01002087 PCG69231.1 KZ150492 + More
PZC70681.1 KQ460041 KPJ18352.1 KQ459324 KPJ01600.1 AGBW02009136 OWR51573.1 JTDY01002117 KOB72069.1 GDQN01006920 JAT84134.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000053268 UP000007151 UP000037510 + More

PRIDE

H9JT27

Pfam

PF00240 ubiquitin

Interpro

IPR000626   Ubiquitin_dom        + More
IPR039336   Midnolin
IPR029071   Ubiquitin-like_domsf

SUPFAM

SSF54236 SSF54236

ProteinModelPortal

H9JT27 A0A2H1UZX4 A0A2A4JB87 A0A2W1B5M9 A0A0N1IBM8 A0A194Q9D5 + More
A0A212FCY0 A0A0L7L9K0 A0A1E1WAY1

KEGG

101740495 no KO assigned | (RefSeq) uncharacterized LOC101740495

GO

GO:0005515 GO:0016020 GO:0006979 GO:0010181 GO:0016040 GO:0045181 GO:0050660 GO:0008152 GO:0016491 GO:0015930

PANTHER

PTHR23010

Length:

767

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00317

Exp number, first 60 AAs:

0.00259

Total prob of N-in:

0.00032

outside

1 - 767

Pi

175.291331

Theta

176.399817

Tajima's D

-0.771843

CLR

0.377484

CSRT

0.183890805459727

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics