SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12893
Pre Gene Modal
BGIBMGA012686
Annotation
dnaJ_homolog_dnj-5_[Bombyx_mori]
Location
Bomo_Chr22(+):3657471-3669753      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.437
 

Sequence

CDS
ATGGCAAGGTCGCCAAAGGATGATCCAAGATACACTGAAATGCAGCATAACGCATGGAATTATCATGCTGAAAACTCTGCAAATCGTTCCACGCCTGGTTTAAACCAACCAACAATCGTTCCAAATCCACATGTAATGAATGACGACATGTATGTGAATGCTAGTTTCGCTAATGATGTTTATTTGAATAAGCACGCTTACAGCCCGCAGACAGCCGCTGCGGCTCCGGTAGAAGACAAGATTTTCAACAATATACCTAATATACCTCGCAACCAAAACTACGGAAATGCAATGTTGAATTTGGGTAATGGTCAAATGGTTAGAGTGTATTATGATGAAAACAACAAACAGTTGATATTTCCTGTATCCGGTCAGTATGAGTTGTTCAACCACAATCAAGGTATCTGTGACACACAACAGTCACAGCCGCACCTTTTTACACTTAATCAAGATTATTCGGTCCGCAACAATATGCAAGGAACACCTACAACATTAAACCAAAACATTGCATTTCATGAAAATATAAATGCCCAGCCTACGTCTAATTTCTTAAAAGATTTATTGGGTAATTTAGAGCCAAACTCTACAGGCACATACTCCCCTTTTGGCCAGAACTATCCTTTGAATCACCCAGATGCTTCCCATTTAAATATACCATCGAATCCTATTATTGAAACTAAAAGCACAATTATAAAGCCTGAGTCTCCAAAAAGGAATGAGAATAGTCCCCTAGCTGACACAAGTAACAAAAAACGAATTATTGCTGAAGTAAAGCCAATGCGACCTTCATATTCTGATGTGCTGGCTAAGAACACCAAAAATGTCAACACCATTGATACAAACCGTAAAATTAAATCTCAAACTCCTGAAACAAAACCAACTAACATCAAAACAAATGCAAAACATGAGAAGCCAGTGTATAGTGGTAAACAATATGAAGATAATAAGCCGAAAACAGACAAAAAACAAACGACAACATTATCTTCAGGCAGTGAGTCTGGTGACCACAACACTGATGACAATGAAAAGCAACAACGCTCCAACAAAAAAACTAAAAATAAACGCAATTCACTATCCCGAAAATGGTCTTCACTTGAAGACTTTACAAATGAAGAAGAAATTAGCTACACTTGTAACAATGAGAGCCAGTTTGTGTTCATAGAAGATCAAGATAAGCCAATGAAAAAAGAAAAAAAAAGTGATCATACCAAAATCAAACTAAACAAACTTAACTTTCTGGATGATGATTTGAATCTTGATGATGATTTTGAAAGTTCAGAATTTGTTCTCCAGGAGGAACAAATGAATGAAGCTGTAAAGACAAAGAAAAAAAAAGACCGTAGCTATCATAAAATCCCTAAGCCCACCCAGGACAAAAAGAAGGGGAATCAATGTAAGTCCAGGAGGAATAAACCAGGATATTTAGGACTGGCTCAAAATTATTTAGAACATTGGGGTGAAGCAACATGGAAGGCTCTCATATGGTTTATCTATTTGCTCTCCGATATTTGTCGCATGAGTCTTCATTTGTCCTTTGACTTATGTACTTCTGTATTCACACAAACATATGTGAGCTCCCAAGCAGTATGGCGCAGCAGCAAGGAATGGCTTTCGAAGATTGGAGACAATAAATACCTATCGTATATAGACAGAAAACTAGGACACACATGGTTTGGTTTTTGGAGAAAAATGAAATGGTTCAAGAAAGAAACAGAAGCGGAAAATGGAAATGACTCGACAAAATTAAATGCCAACATACCATTGCCCGCCACTGGTGAGGAAGCCATGAAACGACTGCTAGCATGCAAAGGGAAAGATCCTTACAGTATTCTCGGCGTAAGCGTGGACTGTTCGGATGAAGATATAAAACGTTACTATCGGCGTCAGGCGTTCCTTGTTCATCCGGACAAAAACCAGCAACCCGGGGCTGAAGAGGCCTTCAAAATACTGCAGCATGCCTTTGATCTCATCGGAGAACCGGAGCGTCGGGAGGCGTACGGGCGGCGCGCCGCGGAGTCGCTGCACGCGGAGGCCGCCTGGGCCGAGCTCAACGCGCTGCTCGCACAGCTGCACCACAAGATGGAGTTCGCGGCCAACACTATACGCTGCACGAACTGCGGGCGGCGCCACAAGCGCGTGCAGACGGACCGGCCGTGCTACGCGGCGCGATACTGCGCACAGTGCAAGATACGACACTCCGCCAAAGAGGGTGATATCTGGGCGGAGTCTAGTCTGATGGGTCTCCTGGTGATGTACTACGCTTGCATGGACGGAGCCGTTTACCAGATAACCCAGTGGGCTAGCTGTCAGAAGAAGAACTTGAGGCAGCTGCGTCCGGACTGCCACGTGGTGCAGTACCGCATCGTGCTCGGGAACAAGGCCGCCGCCGCCGCCGCCACCGCCGACAACCACGAACCGAATCTAGAAGAGTTCCTGAACAGTTTGTACGGCAAGTCCGGCGCGCCGCCCCCCGCCGGAGCCCGCCCGCCCACCGACTCCGCTGACGCCAAGAAACGACGCAATAAAAAACCTAAAATCTAA
Protein
MARSPKDDPRYTEMQHNAWNYHAENSANRSTPGLNQPTIVPNPHVMNDDMYVNASFANDVYLNKHAYSPQTAAAAPVEDKIFNNIPNIPRNQNYGNAMLNLGNGQMVRVYYDENNKQLIFPVSGQYELFNHNQGICDTQQSQPHLFTLNQDYSVRNNMQGTPTTLNQNIAFHENINAQPTSNFLKDLLGNLEPNSTGTYSPFGQNYPLNHPDASHLNIPSNPIIETKSTIIKPESPKRNENSPLADTSNKKRIIAEVKPMRPSYSDVLAKNTKNVNTIDTNRKIKSQTPETKPTNIKTNAKHEKPVYSGKQYEDNKPKTDKKQTTTLSSGSESGDHNTDDNEKQQRSNKKTKNKRNSLSRKWSSLEDFTNEEEISYTCNNESQFVFIEDQDKPMKKEKKSDHTKIKLNKLNFLDDDLNLDDDFESSEFVLQEEQMNEAVKTKKKKDRSYHKIPKPTQDKKKGNQCKSRRNKPGYLGLAQNYLEHWGEATWKALIWFIYLLSDICRMSLHLSFDLCTSVFTQTYVSSQAVWRSSKEWLSKIGDNKYLSYIDRKLGHTWFGFWRKMKWFKKETEAENGNDSTKLNANIPLPATGEEAMKRLLACKGKDPYSILGVSVDCSDEDIKRYYRRQAFLVHPDKNQQPGAEEAFKILQHAFDLIGEPERREAYGRRAAESLHAEAAWAELNALLAQLHHKMEFAANTIRCTNCGRRHKRVQTDRPCYAARYCAQCKIRHSAKEGDIWAESSLMGLLVMYYACMDGAVYQITQWASCQKKNLRQLRPDCHVVQYRIVLGNKAAAAAATADNHEPNLEEFLNSLYGKSGAPPPAGARPPTDSADAKKRRNKKPKI

Summary

Uniprot
H6VTR2   H9JT24   A0A2A4JAY0   A0A2H1UZX6   A0A194Q7V4   A0A212F504   + More
A0A0N1IQ13   A0A3S2NC46   A0A0L7L1E2   A0A1Y1LP11   A0A0V0G4U5   A0A171AFF0   T1HH27  
Pubmed
26434795    19121390    26354079    22118469    26227816    28004739    + More
EMBL
JN872897    AFC01236.1    BABH01030659    BABH01030660    BABH01030661    BABH01030662    + More
NWSH01002087    PCG69235.1    ODYU01000045    SOQ34150.1    KQ459324    KPJ01603.1    AGBW02010296    OWR48789.1    KQ460041    KPJ18349.1    RSAL01000108    RVE47223.1    JTDY01003585    KOB69302.1    GEZM01054410    JAV73675.1    GECL01003049    JAP03075.1    GEMB01001133    JAS02015.1    ACPB03001025    ACPB03001026    ACPB03001027   
Proteomes
UP000005204    UP000218220    UP000053268    UP000007151    UP000053240    UP000283053    + More
UP000037510    UP000015103   
PRIDE
H6VTR2    H9JT24   
Pfam
PF00226   DnaJ        + More
PF14901   Jiv90
Interpro
IPR032843   Jiv        + More
IPR001623   DnaJ_domain       
IPR036869   J_dom_sf       
SUPFAM
SSF46565   SSF46565       
Gene 3D
1.10.287.110    
CDD
cd06257  DnaJ
ProteinModelPortal
H6VTR2   H9JT24   A0A2A4JAY0   A0A2H1UZX6   A0A194Q7V4   A0A212F504   + More
A0A0N1IQ13   A0A3S2NC46   A0A0L7L1E2   A0A1Y1LP11   A0A0V0G4U5   A0A171AFF0   T1HH27  
PDB
6BYR     E-value=3.56351e-11,     Score=168

Ontologies

KEGG
101740775    K09534 DnaJ homolog subfamily C member 14 | (RefSeq) DnaJ-22; dnaJ homolog dnj-5
GO

Topology

Length:
846
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.19666
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00029
outside
1  -  846
 
 

Population Genetic Test Statistics

Pi
294.015675
Theta
200.258759
Tajima's D
2.065533
CLR
0.159812
CSRT
0.889705514724264
Interpretation
Uncertain
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