SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12880
Pre Gene Modal
BGIBMGA012699
Annotation
PREDICTED:_uncharacterized_protein_LOC101743969_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.921
 

Sequence

CDS
ATGCCCCAACAATCTGCGACGTGTATAACTGCGGTTCCGAGCAAGACTGTCGAAGTTGTAGAAACGAGCTATCGCGGCCGCAAGCCACTCGGCGGCACAGCAGGAGTTCCCGGAGCCCCAGGAGTAGCGGTCCCCGGTGTGGCGACCGCCGCGTCACCAAGTCCCGCGCCGCAGACCCCAGCAGCGCCGAGCCCAGCGCCCGCCACCACGCCCGCCATGAAGCAAGAGCACCCCAGCCAACCTATGGCACCGATGCCGTTCTACGCAGGCGACCCTAACAGATTCCCAACGACGTGGCAGACTGATCCGTCTCAAGGCTGGCAGAACCAGTTCATACAGCAGCTTCCCACACAGACGGGTCAGACGACTTTGGATTACCAAGGAAACCACACTGCCTACGCAACCTCGCCCCACTATCAGGCTAACACCACGTACACCGTCCAGAATGTCGCTACAACGTTTGACGTCACAAACAGCACGTATTATCAAGCGGGAGTACAGGCTGTCCCCGCGCAACGACCTCCGTCGAACCGGGGTGCCTACACTCCGGTCCCCTCTCCGCGAGCACCTCACTACACCACAGAGTACCAGCAACAATACGCGCAACAAGCATCTACGCCCGGCGCAACTTCAGGCACTGATTCGAGACCAGCCTCGGCCGCTTCTTACCAAAGTAACGCACCAACAGCGGCCACCCCGGTCTATTCTGTCGGTCAAAACTATGAACGATCAGAGTACAGTACGGAGCATTCAGAGGAATACAATAATTCTGAGAGCGGCACAGGAGATACGAATAATGAAGTGGAAAGACAAGAACAGAACTCGACTAGTGGACAGCAGTCGGGAAACGCCGAGCCTGGATACCTGCAGGGGAGCAACGGTCCGCGAGCTTCACTCGATTGTAGCGGGTATTCGGGCGCTTACAACAGCGGACAGTACAGGGAAAACGGTCAAATGCAAAATCAACAACAATTACAAGCTCAGCAACAACTTCAGAGTCAGCAAATGCAAAACCAGCAACAACTTCAGAACCAACAGCACATGCAAAACCAACAACAGATTCAGAACCAGCAACAAATGCAAAGCCAACAACAAATGCAGAACCAGCAACCTATGCAAAATCAACAACAAATGCAGACTCAGCAACAAATGCAGAATCAGCAACAGATGCAGAGTCAGCAACAAATGCAGAATCAGCAACAAATGCAGAATCAGCAACAAATGCAGAATCAGCAACAAATGCAAAATCAGCAACAAATGCAGAGTCATCACCAACAATTACAAATACAAAACCAGCAACTTCAAAATCAACAATTACAGCAGCAGAGACAAGATGAGTCAGAACAGCAAATGTTTTCACAATCAGACAGGGTCAATTTGAACTCGAGACTGAAAACGATGATTTTAAATAAACAAAATCACAGCCGCGATGGCACTAATACGCCGCCGGATAAAGGGGATCCCGGAGAGGGACCACCTCGGGACGATAGGAAGACCGGACCTACTTCCGTCAACGACGATAGAAATACTACCGGTCATTTTTTATCGTATAGCCACCATCTCCGAGATAATTACCGCTTAGGCGAACAGGTTTATCCTGCCGCTGGTAATTATTCACAAAGCACTCATGCTTATAGCGTGAGTGAGTTCGGAGGTGGTGGCCACCAAGTATGGGAGGGAGGAACAGAGGCTCTGAGAGGTTATGATAAACACGTTCCTAATAAGAACGTATCCAAAACTTCTCAGAAATTACCGTCCTACGCGGACGTTAGAAGCCAATACGGTGCATATACCACCGTATCGTATGAGCCGCATAAATATGCAGAGGCATATAATAGTGATAGCTTAGGTTTAAATCAGCAAGACAGTAAAGATTTCCAGTCGAAAATGCTCATCGGACCTGTATCGGAAATGAACCAACAAAACTGCACCACAACGCAGGACACGAACGCACAAACACGAGCTTATGATAGAGAGGCGTACGATGCAAAATTTAGACACCCATCGGCGCCCTTAATACCAAAATTAGAGATACCTGATAGTTATCAATACCACAAAGACGAAAGATTAATTAAAACTGAAGTGCAACGACCAGTTAATCAAAATACGTATACGAAACAGAATGAAATGTCAATAAACAGTTTGTACAGGGATTATCCTAATGGAATAGTAAGTAGGTCACAACAGAATACAGTTTTACCGCCTATATCTACAATAAAGCAAGAGGGCTTTGCCCAAAGTCCACAGACCTATCAAAATTTTCAAAATTATCCTTATCGGATAGACCAGAGGCCAGACCAAACTGGGTCTTTCGCACAAATACCTCGAACGCAAGAGAATATAGGATTTCAAAAATATAACAGATCTTACAATGAAAACAAAGAAAGTAAGTCAACAGAAAACAAAAGTAGTTCAGATAAAAACACTCCATCGGAACCAAGATCTTACTACATTGAACAGATCAAATCTGAACACTCGCCGCCAGGTCACAAAATATATAAGAACATGAACTACAGCCCGCCGAGAGACGAACCTTATTTATTTCCCGGGGACGGAGGGCCGACAGCCATCAAAAACGAAGTGGGCTACTCGTGTTGTCGACAAGGATCTACAAAGAAGCCGCCCCCGGAACACCTAAGAGATGGCGCTTGCCCTGGATATCAAACCAAAGATGAAGTTTTAGAAGACGAACCTGAAACTACGGATAAAAATGATCCCAAAAACCAAAAAGCCACAGCGCCAACACCAGATGTAACGAAACCAAAGGAAAACCAATTCAATTACTCAAAAGAATATTTAGAAAACTTGGAAAGACTACGAACTAATTCTAGGACGGAGGTTCCAGATTGCAACTGTTTTCCTGCTGACAAGAACCCGCCGGAGCCTGGCAGCTATTATACTCATCTAGGTTCAGCTTCTAGTCTGGCAGAATTGAGGAGGGAGCTAGAGGCTCGGACCGGCCTGTCAGGCAAGGAGCTTAGAATAGAAAAGATCTGTTACACTGGGAAAGAAGGGAAAACAGCTCAAGGTTGCCCTATGGCAAAGTGGGTAATCAGACGAGCGAACTACACCGAGAAAGTCCTAGTCGTAGTGAAGTGTCGAAACGGTCACAAATGTCCCACCGCTTGGATCGTTGTGTGTCTGGTCGCCTGGGAAGGCATCCCTCAGTCGGAGGCGGATCTCGACTACACTCTTCTATCGCACAAGCTGAACAGATACGGCCTACCTACCACGAGACGTTGCGCCACTAACGAAAACAGGACGTGTGCCTGCCAAGGTCTGGACCCGGAAACGTGCGGCGCCTCTTACTCCTTCGGCTGCTCGTGGTCCATGTACTACAACGGATGCAAATACGCCCGTTCAAAGACAGTTCGGAAGTTTCGGCTCTCGGTGAAGACGGAGGAGAGTGAGATTGAAGAACGCATCCACGTGCTGGCGACTCTGCTCAGCCCGCTGTACATGAACCTGGCGCCGAGGGCGTTCGACAACCAGTGCCAGTTCGAGAAGGAGGCGTCGGACTGCAGACTGGGCTTTAAACCTGGCCGACCTTTTTCTGGTGTGACTGCGTGCATCGACTTCTGCGCGCATGCGCACCGCGACCTGCACAACATGAACAACGGCTGCACGGCCGTGGTGACGCTCGCCAAGCACCGCGCGCTCAGCCGGGCCGGCGACGAGCAGCTGCACGTGCTGCCGCTCTACGTGCTCGACGACACCGACGAGTTCGGCTCCAAGGAGGGCCAGGACGAGAAGGTCGCGAGCGGCGCGCTGGAGATACTCGACAAGTATCCCATGGAGGTCCGTGTGCGCTCAGTGCCGTTACAGCCATGCAGGAGGCACGGCAAGAAGCGGAAAGAAGAAGACAGCGGGGACTCTGCGAACAACTCGACTAACAACACACCACAACAAAGTCCTGGAAACAATCAGAAAAAGACTCAGTGCTCTACCCCCACGCCTCGAACTCCGCAACCTGACGCCAGGAATAACGCGAGTCCACGAAGCCAAAGCAGCTCATCGCCCAGAGCCGGCACCCCGTCTTTTAACCAGTCCAACCCATCCGCGTTTACCAATAACCAACACTACAATTCCGCTTTCATCAACCCTAACATGCACAACCAGAGTCAAGGCGGTCTCATGAATCCGAACTTGGGCAACCCTGCCTTGTTGGACATGGCGACAATGATTGACAACTTCACCGATGCCCAACTCCAGAGCAATCAGATCTCGAGCACAGTTTTAGACTCTCCATACAATCCGTACGATCAAAGCTACAATCTCCATCATCAAAACGCCATATACCAAGCAAACTCTATAGCGGAAAATAATTCGTGCCAAAATCAAAATCCCAACCAGCTGCCCAGCTTTGCCACCGGTCTCCCGAAACGAGATCAACAGTTCAATGCCGCTAACACTCAGATCAATGTACAGAATCAATGGCATGACTTTAATAGCGCTCAAATATTCAATAATGTGGTTAAAGAAGACCCTGATTCTACGACGGCTCATTTGAACGTTCCCCCGAATAACTACAGTCCAGATTCGAACAGGAGCGACACCAACTCCAATCAAATGCTACAAAAAAATAACGAAACCGTTAAACAGAGCGCTGTCGGAGAGATAAATCAGAAGTTACCGGAATTCGAGATGCCATGTTCCCCGCGCCTGACCGAATTATCACAGAACTCACAGAGCACACCCCCGTCTCCGGCGTCATCTCAAATATCCGACCTCAGATCACCGAACAACGAATCGCTCAATTCGTCTGACGTTCGTCAGAGCGTTTGGAAGTCGCCGGATTCTAAAAACTGGGATCAGTCGAAACCTAAAGATCAATTGACTCTTGAAAATGAAAATCTGTTGTTTCGAGTGCCAAAAGCCCGGCCACCGTCTAGATCGCAGCACGTAAATCCAGAAAATTTGGAGAATCCCACCTTTCTGAAACCTTACCCGCCCTCTGATAGACCGCACCTCAATCAGGGCTACGAGCACAGGAGTCCCTACGATGCGAGAGTGCAAAATAACACTACCCCACAAACTTCCGCATCGCAAACAAATTACACTATCAATCACGAAGAAATCAATCAAGCGACAGCAAACAAACCTGATTTCACCGGAAACAATTTTCATCCCGTTAACCAAACCTCGTACGGAAACCAAGCTCCCATTCAAGGATATGGAAATTATCCGCAGATGACAAACGCCTATCCGTTTTCAGCCAGTCCGTACGGACATTTCAACCCGTATGAGAATTCTTACAACGACTATAACCTCGCTTACTACAATGCAGAAAAATACAAAAGAGAGGAGTTATTGAGAAACTCGCACTGTTACAATTCATACGGGTATCAGTACAACCCAAATTTCACCTCCAACTTTTATCAAAATCCGAGTCCGAATTGGTGTCAAACATCGCCAAACTGGTGTCTGTACCCACCACCGTTCACTATCCCGTACCCACCGGAACCGCCTAAAGCTGAGCCCATCGGCGAAGTCACAGAATACACCGAGAATCTGGAATGCTTTAAAGACAGCCAAATGGGGGGCGTCGCCATCGCTCTCGGACATGGAAGCGTCCTGTTCGAGTGCGCCAAACACGAGATGCACTCGACAACCGCCGTCAGAGCTCCGAACCGAGTCACTCCGACCAGGATCTCGCTCGTATTCTACCAGCACAGGAACTTGAATCGACCTAAGCACGGGCTCGAGGAGTGGGAGGAAAAGATGAGGTTGAAGAAATTAGGGTTAAATCCGCCGACGCCTAGCACCCCGGCACCGGCCGCGATCGCACCGACGCCGGTCGCAAGGCCAGGGCCAATAGGACCGATTGCGGGGCCAGGGTCGACGGGTCCAAGGTCTGCGGGCCCGGGCCCGGCGCTGGTGCGTGCCGAGACGCACACGACGACATCATGGACGACGCTGTTCCCCATGCACGGCTGCACGGTGACGGGCCCCTACCAGGAGTCGGCCACCTGA
Protein
MPQQSATCITAVPSKTVEVVETSYRGRKPLGGTAGVPGAPGVAVPGVATAASPSPAPQTPAAPSPAPATTPAMKQEHPSQPMAPMPFYAGDPNRFPTTWQTDPSQGWQNQFIQQLPTQTGQTTLDYQGNHTAYATSPHYQANTTYTVQNVATTFDVTNSTYYQAGVQAVPAQRPPSNRGAYTPVPSPRAPHYTTEYQQQYAQQASTPGATSGTDSRPASAASYQSNAPTAATPVYSVGQNYERSEYSTEHSEEYNNSESGTGDTNNEVERQEQNSTSGQQSGNAEPGYLQGSNGPRASLDCSGYSGAYNSGQYRENGQMQNQQQLQAQQQLQSQQMQNQQQLQNQQHMQNQQQIQNQQQMQSQQQMQNQQPMQNQQQMQTQQQMQNQQQMQSQQQMQNQQQMQNQQQMQNQQQMQNQQQMQSHHQQLQIQNQQLQNQQLQQQRQDESEQQMFSQSDRVNLNSRLKTMILNKQNHSRDGTNTPPDKGDPGEGPPRDDRKTGPTSVNDDRNTTGHFLSYSHHLRDNYRLGEQVYPAAGNYSQSTHAYSVSEFGGGGHQVWEGGTEALRGYDKHVPNKNVSKTSQKLPSYADVRSQYGAYTTVSYEPHKYAEAYNSDSLGLNQQDSKDFQSKMLIGPVSEMNQQNCTTTQDTNAQTRAYDREAYDAKFRHPSAPLIPKLEIPDSYQYHKDERLIKTEVQRPVNQNTYTKQNEMSINSLYRDYPNGIVSRSQQNTVLPPISTIKQEGFAQSPQTYQNFQNYPYRIDQRPDQTGSFAQIPRTQENIGFQKYNRSYNENKESKSTENKSSSDKNTPSEPRSYYIEQIKSEHSPPGHKIYKNMNYSPPRDEPYLFPGDGGPTAIKNEVGYSCCRQGSTKKPPPEHLRDGACPGYQTKDEVLEDEPETTDKNDPKNQKATAPTPDVTKPKENQFNYSKEYLENLERLRTNSRTEVPDCNCFPADKNPPEPGSYYTHLGSASSLAELRRELEARTGLSGKELRIEKICYTGKEGKTAQGCPMAKWVIRRANYTEKVLVVVKCRNGHKCPTAWIVVCLVAWEGIPQSEADLDYTLLSHKLNRYGLPTTRRCATNENRTCACQGLDPETCGASYSFGCSWSMYYNGCKYARSKTVRKFRLSVKTEESEIEERIHVLATLLSPLYMNLAPRAFDNQCQFEKEASDCRLGFKPGRPFSGVTACIDFCAHAHRDLHNMNNGCTAVVTLAKHRALSRAGDEQLHVLPLYVLDDTDEFGSKEGQDEKVASGALEILDKYPMEVRVRSVPLQPCRRHGKKRKEEDSGDSANNSTNNTPQQSPGNNQKKTQCSTPTPRTPQPDARNNASPRSQSSSSPRAGTPSFNQSNPSAFTNNQHYNSAFINPNMHNQSQGGLMNPNLGNPALLDMATMIDNFTDAQLQSNQISSTVLDSPYNPYDQSYNLHHQNAIYQANSIAENNSCQNQNPNQLPSFATGLPKRDQQFNAANTQINVQNQWHDFNSAQIFNNVVKEDPDSTTAHLNVPPNNYSPDSNRSDTNSNQMLQKNNETVKQSAVGEINQKLPEFEMPCSPRLTELSQNSQSTPPSPASSQISDLRSPNNESLNSSDVRQSVWKSPDSKNWDQSKPKDQLTLENENLLFRVPKARPPSRSQHVNPENLENPTFLKPYPPSDRPHLNQGYEHRSPYDARVQNNTTPQTSASQTNYTINHEEINQATANKPDFTGNNFHPVNQTSYGNQAPIQGYGNYPQMTNAYPFSASPYGHFNPYENSYNDYNLAYYNAEKYKREELLRNSHCYNSYGYQYNPNFTSNFYQNPSPNWCQTSPNWCLYPPPFTIPYPPEPPKAEPIGEVTEYTENLECFKDSQMGGVAIALGHGSVLFECAKHEMHSTTAVRAPNRVTPTRISLVFYQHRNLNRPKHGLEEWEEKMRLKKLGLNPPTPSTPAPAAIAPTPVARPGPIGPIAGPGSTGPRSAGPGPALVRAETHTTTSWTTLFPMHGCTVTGPYQESAT

Summary

Pfam
PF12851   Tet_JBP
Interpro
IPR024779   2OGFeDO_noxygenase_dom        + More
IPR040175   TET1/2/3       
IPR002857   Znf_CXXC       
IPR027267   AH/BAR_dom_sf       
SUPFAM
SSF103657   SSF103657       
PDB
4NM6     E-value=2.40602e-106,     Score=992

Ontologies

Topology

Length:
1990
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.16549
Exp number, first 60 AAs:
0.16251
Total prob of N-in:
0.00743
outside
1  -  1990
 
 

Population Genetic Test Statistics

Pi
169.522124
Theta
169.000831
Tajima's D
0.539986
CLR
0.722185
CSRT
0.532073396330183
Interpretation
Uncertain
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