SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12878  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012701
Annotation
glutamate_synthase_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.67 Nuclear   Reliability : 1.012
 

Sequence

CDS
ATGGAGTGGGAAGGGCCGCCCAAGCAAGGCTTGTACGACCCCCAGAACGAGCACGAAGCCTGCGGTGTTGGTTTTGTTGTTGCTATCGACGGAAAACGCAGTCATAAAATTGTCCGAGATGCTGAAGTCCTGGCTAAACGTATGGAGCACCGCGGTGCCTGCGCGTGCGACAATGATACCGGTGATGGCGCCGGTGTACTGACCGCTATCCCTCATCAATTCTACTGCGCTCAACTAAGAGACAGTCACCAGATCGATTTGCCCCCCTTCGGGCGATATGCGACTGGAATCTTCTTCCTAGACAAACTGCATCACCAGGACATAGAAGCCAAGTTTCTAGTACTAGCCGAGAGTCTTGGTCTTAAGGTGCTGTGCTGGCGTACCGTTCCTACAAAAAACAGCAGCATCGGTCAGGTGGCTCGTAACTCGGAGCCGTATATGCGTCAAGTGTTTGTTACCGGCGATATCGAGGACGAGACCCAGCTGTCGCGGCAGATATTCGTGCTCCGTAAACGCGCAAGCCACGAGCTGGTGGTGCCGGGCGCCAGGTTCTATATATGCAGCCTGTCGCTCAGGACTATCGTGTACAAAGGACTTCTCACTTCTAATCAGCTATGGGAGTACTTCAAGGATCTGAGCAATCCAGCGTTCACAACGTATTTGGCGCTTGTCCACACAAGATTCTCAACGAATACGTTTCCGAGCTGGGAAAGAGCACACCCTTTGAGAGTTCTCGCCCACAATGGAGAAATAAATACGTTACGAGGTAACGTCAATCTGATGAAAGCTCGCGAGGGTGTGATGAAGAGCGACATATTTGGAGACGACTTGAAGAAGCTATATCCAGTGGTGGAGCCCAACCTGTCGGACTCTGGGTCGGCGGACTGCGTGCTGGAGTTCCTGGCGCAGGCGGGCGGCAGGTCGCTGCCCGAGGCCGTGATGACCATGGTGCCCGAGGCGTGGCAGAACGACCACACCATGCACCCCGACAAGCGCGACTACTACCAGTGGGCCTCCTCCGCCATGGAGCCGTGGGACGGACCCGCCCTGGTCTCCTTCACGGACGGCCGGTACATCGGTGCCATACTGGACAGGAACGGTCTGCGGCCGTCTCGTTTCTACGTGACCAGCGAGAACATACTGGTCATGGCCTCCGAAGTCGGAGTGTACGACGTCGAGCCTGAGAAGGTCGTACTCAAGAGTCGTCTGAAGCCGGGACGGATGCTGCTCGTGGACACAGTTCAGAAAAGAATGATTCAAGATGTCGAGTTGAAGATGGAAATAGCGAGGAGCCGACCGCACTCTGAGTGGCTGAGAGATAAGATCACAATGGAGGACATATACAAATCATTGAGTCCAGCCGAGAACGGTTCTACGGTTTCCAACGGCGAATCTCGACCCATTTCGGGCCTTTCTGACAAAAGACTCGGCCTCTTCGGTTACACCATCGAGTCAATCCACATGCTGCTGCTTCCAATGATACAGAACAAGAAGGAAGCCCTCGGAAGCATGGGCAACGACGCTCCGCTGGCGTGCCTGTCCCGCTTCCAGCCGCTGCCCTACGAGTACTTCAAGCAGCTGTTCGCGCAGGTCACGAACCCGCCCATCGATCCGTTCAGGGAGAAGATAGTGATGTCCCTGCTGTGTCCGATCGGACCGGCGCCGAACATCCTGCAGCCCGGCGCGGAGTTCGTGCACCGGCTGTTCCTGCCGCAGCCCGTGCTGTCCCTGCCGGACCTCGACGCGCTCAAGCGGACTAGCTACCGGGGCTGGAAGACGCAAGTATTGGACTGCACGTACGAAGCGTCGTCGGGCGCGAGCGGGCTGGTGGCGGCCCTGAACGCCGTGTGCGCCGCCGCAGAGAGCGCCGCCCGCGCGCGCTGCCAGCTGCTCGTGCTCTCCGACCGCGCCGCCGGACCCACGCGCGTGCCCGTCAGCTCGCTGCTCGCGCTGGGAGCTGTACATCATCATTTAATTGAAACCCGTCAGCGAATGAAAGTTGGACTCATTGTCGAGACGGCCGAAGCGAGAGAGGTTCATCACATGTGCGTTCTGTTAGGCTACGGCGCCGACGCGATCTGTCCGTACTTGGCCTTCGAGCTGGCGTTCGCCCTCCGCAACGACAACATCCTCGACCCGAACCTCACCGACGACGACATCTACTCCGCCTACCAGAAGGCCATTGAGACCGGCCTCGCCAAGGTCATGGCCAAGATGGGCATCAGCACCCTCCAGTCTTACAAGAGCGCTCAGATATTCGAAGCCGTCGGCTTGAGCGAGGAAGTCATCGATAAATGTTTTAAAGGAACCCAATCTAGGATTGGTGGCGTGAACTTTGAGATTCTGTCGAATGAGACGTTGGACCGACACGCCATGACTTACGGGGATTGCGTAGATAGTCTCGTTTTGAGGAACCCGGGCAACTATCACTGGCGCGCCGGCGGAGAGAAGCACGTCAACGACCCCACGTCCATCGCCAACCTGCAGGAGGCCGCGCTCGGGAACAGCAAGTCCGCCTACGACCGGTTCAGAGAGAGCACGCTGGAGTCGGTCCGCGCCTGCACGCTGCGGGGCCAGCTGGAGCTCGTGCGGCTGGACGAGCCCATCCCTATCAGCGAAGTGGAGCCGGCCTCGGAAATCGTTAAACGTTTCGCTACAGGTGCGATGTCATTCGGATCGATATCTCTGGAGGCTCACACGACGCTCGCCATCGCCATGAACCGCATCGGAGGTAAATCCAACACCGGAGAGGGAGGGGAAAACGCTGACCGATATTTGAACCAGGACCCCGACTACAGCAAGCGCTCGGCCATCAAACAAGTAGCGTCGGGACGGTTCGGCGTGACGGCCTCGTACCTCGCGCACGCGGACGATCTGCAGATCAAAATGGCGCAGGGGGCCAAACCCGGGGAAGGTGGAGAACTGCCCGGCTACAAGGTGACGGCGGACATAGCGCGCACGCGGTGCTCGGTGCCGGGCGTGGGGCTGATCTCGCCGCCGCCGCACCACGACATCTACTCCATCGAGGACCTCGCCGAGCTCATCTACGACCTCAAGTGCGCCAACCCCAAGGCTCGCATATCCGTCAAACTGGTGTCCGAGGTCGGGGTCGGGGTCGTGGCTTCCGGGGTCGCCAAGGGCAAGGCGGAGCACATCGTGATCTCGGGGCACGACGGCGGCACGGGCGCGAGCTCGTGGACCGGCATCAAGTCGGCCGGCCTGCCCTGGGAGCTGGGGGTCGCCGAGACGCACCAGGTGCTCGTGCTCAACGACCTCAGATCCAGGGTCGTCGTACAGGCGGACGGTCAGATCCGGACCGGGTTCGACGTGATGGTCGCCGCGCTGCTCGGGGCCGACGAGTTCGGGTTCAGCACCGCGCCGCTCATTGCGCTCGGCTGCACGATGATGCGCAAGTGTCACTTGAACACGTGCCCGGTCGGCATCGCCACGCAGGACCCGGTGCTCCGGAAGAAATTCGCCGGGAAACCTGAACACGTCGTCAACTATGTCTTCATGCTGGTGGAAGAGATACGTCAGCACATGGCCGAGGTCGGTGTGCGGCGCTTCCAAGACCTGATCGGTCGCACGGACCTGCTAAAGGTGCGCGAGAACAACGACAACCCCAAGGCGAGGCTGCTCAACCTGAGCCTCATACTGAAGAACGCTCTCCACATGAGGCCCGGGGTCAACATCATCGGGGGCTCCAAAGCGCAGGACTTCCAACTGGAGAAACGTCTGGACAATCAGCTGATCGAGCAGTGCTCCGGCATCCTGGACGGGACTCAGGCGCACGCCGACATCAAAATGAAAATAACGAACGAGGACCGCGCGTTTACTTCCACCCTGTCCTACCGGATCGCTATGGAATACGGGGACGACGGTCTACCGGACGGTAAAACTGTTAACATCTCATTGACCGGTTCAGCGGGACAAAGCTTCTGCGCGTTCCTGTCCAAGGGCATCACTGTGACGCTCGAGGGAGACGCTAACGACTACGTGGGCAAGGGTCTGTCGGGCGGCACCGTGGTCATCTACCCGCCGCGCGACTCTCCCTTCGAGTCGCATCTCAACGTCATCGTGGGGAACGTGTGTCTGTACGGAGCCACCTCGGGACGCGCCTACTTCAGGGGCATCGCGTCGGAGCGGTTCTGCGTGCGCAACTCTGGCTGCACGGCCGTGGTGGAGGGGGTGGGGGACCACGCGTGCGAGTACATGACGGCGGGCGCGGCGCTCGTGCTGGGGCTCACCGGCAGGAACTTCGCGGCCGGCATGAGCGGTGGCATCGCCTACGTCTACGACATTGATGGTTCATTCAAAGGGAAATGTAATCCTGAAATGGTTGAACTCTTACCTTTGGAACTCGAAGACGACCTCAAATATGTACAGAAACTTCTCGAAGAATTCGTAGAGTACACTGGATCACTGATCGCGGTAGAACTATTAAAGACATGGCCCGAACCAGCGAAGAAGTTCGTCAAAGTGTTTCCGTACGAGTACCAGCGAGCGCTGAAGCAGATGGCTCTGAAGCAGCCGGCCGCGCAGAAGGGCGACACCAATGGACATCAGAACGGCGTGCTCGACATAGAGGAGACCGTTAAGGATGTCGAGTTCGAGAAGAAGAATCTCGAAAAGATCTTGGACAAGACCAGAGGGTTTATGAAGTACGGTCGCGAGACGGCGCTGTACCGCAGCGCGGAGAGCCGGCTGCGCGACTGGGAGGAGATCTACGCGGGGGGTGCGGTGCGGCGCTCCGTGCGCGTGCAGGCGGCGCGCTGCATGGACTGCGGCGTGCCCTTCTGCCAGAGCGCGCACGGCTGCCCGCTCGGCAACCTCATCCCCAAGTGGAACGACCTCATCTACCGCGCCGACTGGGCGCAGGCGCTCGCGCAGCTGCTGCAGACCAACAACTTCCCCGAGTTCACTGGGCGCGTGTGTCCGGCGCCGTGCGAGGGCGCGTGCGTGCTGGCCATCAGCGAGCCCGCCGTCACCATCAAGAACATCGAGTGCGCCATCATCGACCACGCCTTCGAGGCGGGCTGGCTCAAGCCGGAGGTGCCGTCGCATCGCAACGGGCACACGGTCGCCGTGGTGGGCTCGGGCCCCGCGGGGCTGGCCTGCGCGCACCAGCTCAACAAGGCCGGCTACACGGTGACGGTGTTCGAGCGGAACGACCGGGCGGGCGGCCTGCTGCAGTACGGGATACCCACTATGAAGCTGAGCAAGGAGGTCGTCGCCAGAAGGATCAAGCTGATGCAGGCCGAGGGGATCGTCTTCAAGTGCAACGTCGACGTCGGGAAGGATATATCCGCTAATGAATTGGCAAGCGAGTACGACGCGCTGGTGCTGTGCCTGGGCGCGACGTGGCCCCGCGACCTGCCCCTGAAGGGCCGCCAGCTCAACGGCATCCACTACGCCATGGAGTTCCTCGAGACCTGGCAGAAGAAGCAGGCGGGATCCACGCATCCGCACATGAAGGACAACCCCGAACTCAACGCCAAAGATAAGGACGTGCTCATCATCGGAGGCGGAGATACCGGATGCGATTGCATAGCCACTTCGTTGCGTCAGGGGGCGAAGACAATAACGACATTCGAAATCTTACCCGAGCCGAAAAAGACCAGAGGACTAGATAACCCTTGGCCTCAGTGGCCTAGAGTTTTCAGAGTGGACTACGGTCACGAAGAGGTGAAGGTCAAGTTCGGTAACGACCCCAGGAGGTTTTCGACGCTCACCAAAGAATTTTTGGACGACGGCGAGGGCAACGTGTGCGGCGTGCTGGCGGTGGAGGTGGAGTGGAGCCGCGGCGCGGGCGGGCGCTGGGACATGCGCGAGGTGGCGGGCTCGCAGCGGGAGTACCGCGCCGACCTCGTGCTGCTCGCCATGGGCTTCCTCGGCCCCGAGAGATACGTCGCCAACCAGCTCGATCTCCCGCTGGATGCGCGCAGTAACATCGAAACACTGAAATCGGATATTTACAAAACGAACGCGAAGAACGTTTTCGCGGCTGGAGATTGCCGGAGAGGCCAGTCGCTGGTGGTGTGGGCGATATCCGAAGGTCGACAAGCGGCGCGGTCCGTGGACATCTTCCTGTCGGGCCGGTCGTCCCTGCCCGGACCGGGCGGGGTCATACACGAGAACTGA
Protein
MEWEGPPKQGLYDPQNEHEACGVGFVVAIDGKRSHKIVRDAEVLAKRMEHRGACACDNDTGDGAGVLTAIPHQFYCAQLRDSHQIDLPPFGRYATGIFFLDKLHHQDIEAKFLVLAESLGLKVLCWRTVPTKNSSIGQVARNSEPYMRQVFVTGDIEDETQLSRQIFVLRKRASHELVVPGARFYICSLSLRTIVYKGLLTSNQLWEYFKDLSNPAFTTYLALVHTRFSTNTFPSWERAHPLRVLAHNGEINTLRGNVNLMKAREGVMKSDIFGDDLKKLYPVVEPNLSDSGSADCVLEFLAQAGGRSLPEAVMTMVPEAWQNDHTMHPDKRDYYQWASSAMEPWDGPALVSFTDGRYIGAILDRNGLRPSRFYVTSENILVMASEVGVYDVEPEKVVLKSRLKPGRMLLVDTVQKRMIQDVELKMEIARSRPHSEWLRDKITMEDIYKSLSPAENGSTVSNGESRPISGLSDKRLGLFGYTIESIHMLLLPMIQNKKEALGSMGNDAPLACLSRFQPLPYEYFKQLFAQVTNPPIDPFREKIVMSLLCPIGPAPNILQPGAEFVHRLFLPQPVLSLPDLDALKRTSYRGWKTQVLDCTYEASSGASGLVAALNAVCAAAESAARARCQLLVLSDRAAGPTRVPVSSLLALGAVHHHLIETRQRMKVGLIVETAEAREVHHMCVLLGYGADAICPYLAFELAFALRNDNILDPNLTDDDIYSAYQKAIETGLAKVMAKMGISTLQSYKSAQIFEAVGLSEEVIDKCFKGTQSRIGGVNFEILSNETLDRHAMTYGDCVDSLVLRNPGNYHWRAGGEKHVNDPTSIANLQEAALGNSKSAYDRFRESTLESVRACTLRGQLELVRLDEPIPISEVEPASEIVKRFATGAMSFGSISLEAHTTLAIAMNRIGGKSNTGEGGENADRYLNQDPDYSKRSAIKQVASGRFGVTASYLAHADDLQIKMAQGAKPGEGGELPGYKVTADIARTRCSVPGVGLISPPPHHDIYSIEDLAELIYDLKCANPKARISVKLVSEVGVGVVASGVAKGKAEHIVISGHDGGTGASSWTGIKSAGLPWELGVAETHQVLVLNDLRSRVVVQADGQIRTGFDVMVAALLGADEFGFSTAPLIALGCTMMRKCHLNTCPVGIATQDPVLRKKFAGKPEHVVNYVFMLVEEIRQHMAEVGVRRFQDLIGRTDLLKVRENNDNPKARLLNLSLILKNALHMRPGVNIIGGSKAQDFQLEKRLDNQLIEQCSGILDGTQAHADIKMKITNEDRAFTSTLSYRIAMEYGDDGLPDGKTVNISLTGSAGQSFCAFLSKGITVTLEGDANDYVGKGLSGGTVVIYPPRDSPFESHLNVIVGNVCLYGATSGRAYFRGIASERFCVRNSGCTAVVEGVGDHACEYMTAGAALVLGLTGRNFAAGMSGGIAYVYDIDGSFKGKCNPEMVELLPLELEDDLKYVQKLLEEFVEYTGSLIAVELLKTWPEPAKKFVKVFPYEYQRALKQMALKQPAAQKGDTNGHQNGVLDIEETVKDVEFEKKNLEKILDKTRGFMKYGRETALYRSAESRLRDWEEIYAGGAVRRSVRVQAARCMDCGVPFCQSAHGCPLGNLIPKWNDLIYRADWAQALAQLLQTNNFPEFTGRVCPAPCEGACVLAISEPAVTIKNIECAIIDHAFEAGWLKPEVPSHRNGHTVAVVGSGPAGLACAHQLNKAGYTVTVFERNDRAGGLLQYGIPTMKLSKEVVARRIKLMQAEGIVFKCNVDVGKDISANELASEYDALVLCLGATWPRDLPLKGRQLNGIHYAMEFLETWQKKQAGSTHPHMKDNPELNAKDKDVLIIGGGDTGCDCIATSLRQGAKTITTFEILPEPKKTRGLDNPWPQWPRVFRVDYGHEEVKVKFGNDPRRFSTLTKEFLDDGEGNVCGVLAVEVEWSRGAGGRWDMREVAGSQREYRADLVLLAMGFLGPERYVANQLDLPLDARSNIETLKSDIYKTNAKNVFAAGDCRRGQSLVVWAISEGRQAARSVDIFLSGRSSLPGPGGVIHEN

Summary

Cofactor
[3Fe-4S] cluster
EMBL
AB271689    BAF30425.1    BABH01030712    BABH01030713    RSAL01000108    RVE47232.1    + More
KQ459324    KPJ01614.1    AGBW02009028    OWR51823.1    ODYU01001186    SOQ37055.1    NWSH01007632    PCG62883.1    NEVH01011876    PNF31497.1    KK853069    KDR11809.1    KQ971343    EFA03092.1    GALX01004777    JAB63689.1    KC223373    AQT27182.1    AXCM01001406    AXCM01001407    GDKW01001136    JAI55459.1    APCN01005860    AAAB01008960    KQ980724    KYN14109.1    GL887707    EGI70214.1    KQ976731    KYM76287.1    QOIP01000010    RLU17847.1    ADTU01006925    GDHC01019575    JAP99053.1    KB631854    ERL86743.1    GL765324    EFZ16548.1    APGK01054218    APGK01054219    KB741248    ENN71930.1    JXUM01011025    JXUM01011026    JXUM01011027    JXUM01011028    KQ560322    KXJ83057.1    MH366174    QBB01983.1    GAPW01000003    JAC13595.1    JXUM01010641    JXUM01010642    JXUM01010643    KQ981523    KYN40441.1    CH478447    EAT32975.1    GFDL01008319    JAV26726.1    DQ383822    AAV31916.2    NNAY01001234    OXU24667.1    EAA10819.4    DS231969    EDS29704.1    GFDL01008310    JAV26735.1    CVRI01000047    CRK97779.1    ATLV01023219    KE525341    KFB48640.1    GGFM01000208    MBW20959.1    ACPB03000006    KZ288445    PBC25656.1    GFDL01008292    JAV26753.1    JR037586    JR037587    AEY57856.1    AEY57857.1    ABLF02036900    ADMH02000991    ETN64496.1    LJIJ01000007    ODN06304.1    CH902618    EDV40432.1    GDAI01000076    JAI17527.1    KF021986    AGR65733.1    CH933809    EDW18703.1    KPU78570.1    KPU78571.1    KPU78573.1    CM000159    EDW94795.1    KRK02062.1    GL447151    EFN86827.1    KRG06323.1    KRG06325.1    CH940647    EDW69367.1    CM002912    KMZ00111.1    KMZ00114.1    CH954178    EDV52036.1    KQS44083.1    KRK02063.1    KRK02064.1    AE014296    AY094734    AAF49409.2    AAM11087.1    CP012525    ALC43001.1    KMZ00112.1    KMZ00113.1    KMZ00115.1    KQS44082.1    KQS44084.1    KRF84340.1    KRF84343.1    GFDF01001195    JAV12889.1    AFH04475.1    AGB94666.1    GFDF01001196    JAV12888.1    KA646796    KA646797    AFP61425.1    CH964062    EDW78848.2    GFTR01008920    JAW07506.1    CH916366    EDV96399.1    GEDC01019277    JAS18021.1    CCAG010008841    MF446850    AWS20468.1    OUUW01000012    SPP87550.1    JXJN01002171    JXJN01002172    CH379070    EAL29938.1    GEDC01007621    JAS29677.1    KRT08502.1    DS235451    EEB15855.1    GAKP01018613    GAKP01018612    JAC40340.1    GDHF01020665    GDHF01007415    JAI31649.1    JAI44899.1    LNIX01000009    OXA50546.1   
Pfam
PF07992   Pyr_redox_2        + More
PF14691   Fer4_20
PF01645   Glu_synthase
PF04898   Glu_syn_central
PF01493   GXGXG
PF00310   GATase_2
Interpro
IPR009051   Helical_ferredxn        + More
IPR006005   Glut_synth_ssu1       
IPR006982   Glu_synth_centr_N       
IPR012220   Glu_synth_euk       
IPR002932   Glu_synthdom       
IPR036188   FAD/NAD-bd_sf       
IPR028261   DPD_II       
IPR036485   Glu_synth_asu_C_sf       
IPR013785   Aldolase_TIM       
IPR017932   GATase_2_dom       
IPR029055   Ntn_hydrolases_N       
IPR023753   FAD/NAD-binding_dom       
IPR002489   Glu_synth_asu_C       
SUPFAM
SSF46548   SSF46548        + More
SSF56235   SSF56235       
SSF69336   SSF69336       
PDB
1OFE     E-value=0,     Score=2840

Ontologies

Topology

Length:
2046
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0687700000000001
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00048
outside
1  -  2046
 
 

Population Genetic Test Statistics

Pi
204.923594
Theta
171.094246
Tajima's D
0.354685
CLR
0.490023
CSRT
0.472026398680066
Interpretation
Possibly Positive selection
Peptides ×
Source Sequence Identity Evalue
31250652 EVHHMCVLLGCTMMR 100.00 3e-23
31250652 SDIFGDGGVNFEILSNETLDRHAMTYGDCVDSLVLS 100.00 6e-15
31250652 SDIFGDGGVNFEILSNETLDRHAMTYGDCVDSLVLA 100.00 6e-15
31250652 EVHHMCVLLDLPLDAR 100.00 6e-15
31250652 EVHHMCVLLGEGNVCGVLAVEVEWSR 96.67 2e-14
31250652 VGLIVETAEAREVHHMCVLLEFTGR 100.00 2e-14
31250652 VPVSSLLALGYGADAICPYLAFELAFALR 100.00 2e-14
27102218 FGVTASYIAHADDIQIK 95.83 1e-11
31250652 FRVVVQADGQIR 100.00 1e-08
31250652 VGLIVETAEAREVHHMCVLLGAMSFGSISLEAHTTLAIAMNR 95.24 3e-08
31250652 QLFAQVTNPPIDPFRGFMK 100.00 5e-08
31250652 SDIFGDGYGADAICPYLAFELAFALRNDNILDPNLTDDDIYSAYQK 100.00 5e-08
31250652 SDIFGDEFTGR 100.00 6e-08
31250652 SDIFGDEFTGR 100.00 7e-08
31250652 YIGGVNFEILSNETLDRHAMTYGDCVDSLVLD 100.00 8e-06
31250652 SDIFGDGGVNFEILSNETLDR 100.00 1e-04
31250652 LSGIICTIGPASR 100.00 3e-04
31250652 IAMGIASER 100.00 0.001
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