SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12872
Pre Gene Modal
BGIBMGA012677
Annotation
hypothetical_protein_RR46_08663_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 4.684
 

Sequence

CDS
ATGAACATGAGGCGTAGAAGGGAATCGGTTGCTTCAGTCTACAGGAAGACCACAAAATTTATAAGCTCCAACACAGCCAATCTTTTGAAGAAGATGCCTAACACCAAGAAAATTAGATCTCCCTCGCAATCAAACGCAGAAGAATTAAAAACAATGTCTATCAACAACAAAGAAGATTCAGAAACTGAAGATGATGATCTCGGAGAAAGAGACCTTGATTACTATTTAGGAGTAAAAAAAAAAGAAACCTATTGGAGAGATCCTGAAAGAACAGAACAAATCGTGAAAGACTATTTACTTTATCATTGCGGGGTTTCAGAAGATGATTTCAATAAGTATCACAAAAAAATCGTAACGAAAACATCTTCAATTGCCGAACCTAGATTAAAACAGGTGCCTTTTAAAATACACAAGAAGAAAAAGAATGATTTGAAAGATGACTCGTGGAAAGACATGGCTGGATTTTTTAAGCTCTTCGCCTACAGACGGGACAGCGAATATTCCACTTCGGATAGTTATAGCGAGTGCGATTCAGATGAATTAATTTATGACGATAAATTCAGTAATAAAGGTGACAAAGACAACGAAATTGAGACTAAAGATGTCGGCGTTAATGGGAGCCACACGGAAAATTTGAATGAGGGTGTGCGGATAAAAGAAGTATCAGAGGGAAGACCTTGCGACAACTGTCCAGAGCTGTGCCCCGGATTCGTCTCACACGCTTGGAGTTACTAA
Protein
MNMRRRRESVASVYRKTTKFISSNTANLLKKMPNTKKIRSPSQSNAEELKTMSINNKEDSETEDDDLGERDLDYYLGVKKKETYWRDPERTEQIVKDYLLYHCGVSEDDFNKYHKKIVTKTSSIAEPRLKQVPFKIHKKKKNDLKDDSWKDMAGFFKLFAYRRDSEYSTSDSYSECDSDELIYDDKFSNKGDKDNEIETKDVGVNGSHTENLNEGVRIKEVSEGRPCDNCPELCPGFVSHAWSY

Summary

Pfam
PF00412   LIM        + More
PF06297   PET
Interpro
IPR010442   PET_domain        + More
IPR037987   FHL2/3/5       
IPR001781   Znf_LIM       

Ontologies

Topology

Length:
244
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00107
Exp number, first 60 AAs:
0.00107
Total prob of N-in:
0.35019
outside
1  -  244
 
 

Population Genetic Test Statistics

Pi
153.247603
Theta
146.91116
Tajima's D
0.032755
CLR
1.273652
CSRT
0.381330933453327
Interpretation
Uncertain
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