Gene

KWMTBOMO12869  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012675

Annotation

eukaryotic_initiation_factor_4E-1_[Bombyx_mori]

Location

Bomo_Chr22(+):2419262-2422978      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.252 Mitochondrial   Reliability : 1.628

CDS

ATGTCTGCACTGTCCAGTCAACATGAGACGCGAGATGGTGATACTAGTCTTCAATCCGAGTCCTCGCCAGCAATAAAACATCCTCTCGAGCACACTTGGAGCTACTGGCTTTACACAAATAAGAGTAAAGAATGGATACACAACTTGGTTGAATTATCAACATTCGCTACTGTAGAAGATTACTGGTGTTTATACCACTACATGAAACTACCTTCAGAGTTAAACCATGGACAAGATTACATGATTTTTAAGAAAGGTATTCAGCCTACGTGGGAGGATCCGATTAACGAAAAGGGCGGACGTTGGATAATTTGCGAAAGCAAATCTGCGCGCAATCTTGACCCTCTGTGGTTGGATCTGATCCTGCTGATGATCGGTGAAAATTTCGAACATCCCGATTTAATTTGCGGCGTTGTCGTCAATATTAAAGCGAAAAGCAAAATATCATTATGGACACGTGGTGAAGACAAACAGAAAAATATGAAGATCGGCAAAACAGTAAAAGAGAAATTGAATATTAACAGAAACATCAGTTACTTCAATCATAATACTACATCTGCGAAATATTTTGTTTAG

Protein

MSALSSQHETRDGDTSLQSESSPAIKHPLEHTWSYWLYTNKSKEWIHNLVELSTFATVEDYWCLYHYMKLPSELNHGQDYMIFKKGIQPTWEDPINEKGGRWIICESKSARNLDPLWLDLILLMIGENFEHPDLICGVVVNIKAKSKISLWTRGEDKQKNMKIGKTVKEKLNINRNISYFNHNTTSAKYFV

Similarity

Belongs to the eukaryotic initiation factor 4E family.

Uniprot

A1YVX2   A0A1E1W208   A0A1E1WNS7   A0A194RG44   A0A194RBB2   Q964Q9   + More
A0A194Q7W7   A0A2A4J1X6   I4DS51   I4DIV4   A0A2H1WC62   A0A212EVY6   A0A3S2L776   H9JT12   Q1HPI1   A0A212EVW2   A0A3S2NS93   A0A194QDU1   A0A2M4BZJ2   A0A1V9Y1B9   A0A2M4BZR9   A0A182IJM0   A0A182TTW9   A0A2M3Z4V4   A0A2Y9D2Z4   A0A2C9GRQ7   Q7QJ05   A0A182R162   T1E8T4   A0A2M4ADZ5   W5J8C8   A0A1L8EIU2   A0A067QP74   A7URN4   A0A182KQJ7   A0A2Y9D2Z0   A0A0P8XVM0   A0A1L8EIG2   B3M6F6   T1KDF0   A0A087URV9   A0A023FI40   A0A182FGM3   A0A1L8EB67   A0A023F732   A0A171A8L4   A0A0M5J818   A0A0Q9WRY3   B4IX96   A0A3B3VLB4   B4LGS3   A0A0C9S1M1   A0A023FVB4   W8BCK9   A0A084VR03   A0A0A1WIZ3   F0J8P5   A0A0K8TSA0   A0A069DQJ0   A0A023GG71   A0A3B0JZU6   A0A2Y9D418   A0A0A1WU02   U5EUM7   A0A1W4VPH5   B4H7Z5   A0A2J7Q7I4   A0A0P4VIG4   B4NJ10   T1IC32   A0A1E1XJ31   A0A1W4VN50   A0A1Y1K7E4   W8BZQ9   B4HJF0   A0A3B5K0V2   A0A1A9UGE0   A0A1A9YI93   A0A0R3P7D6   A0A0R3P7G0   A0A1A9ZU78   B4QLK6   D6WJL4   A0A0R3P7G7   A0A0Q9WZF9   A0A0C9S1K9   B4QKY1   A0A1B0CGM2   B4MX95   A0A034WGM9   A0A3Q1FKS6   A0A1B0AVS9   A0A0R1DVD2   T1PBP2   A0A1I8MY20   A0A0R3P936   A0ANA4   G3PVV7   B4HIW7  

Pubmed

19121390    26354079    11437917    22651552    22118469    28327890    + More
12364791    14747013    17210077    20920257    23761445    24845553    20966253    17994087    18057021    25474469    26131772    24495485    24438588    25830018    21362191    26369729    26334808    20566863    27129103    28503490    28004739    21551351    15632085    22936249    18362917    19820115    23185243    25348373    17550304    25315136    16951084   

EMBL

BABH01030746    EF139224    ABL75549.1    GDQN01010133    JAT80921.1    GDQN01002400    + More
JAT88654.1    KQ460416    KPJ14906.1    KPJ14907.1    AF281654    ODYU01010467    AAK94897.1    SOQ55600.1    KQ459324    KPJ01632.1    NWSH01003925    PCG65678.1    AK405423    BAM20741.1    AK401222    BAM17844.1    ODYU01007675    SOQ50669.1    AGBW02012108    OWR45631.1    RSAL01000108    RVE47241.1    DQ443192    DQ443421    ABF51281.1    ABF51510.1    OWR45632.1    RVE47240.1    KPJ01631.1    GGFJ01009291    MBW58432.1    MNPL01001056    OQR79492.1    GGFJ01009402    MBW58543.1    GGFM01002782    MBW23533.1    APCN01000170    AAAB01008807    EAA04187.4    AXCN02000529    AXCN02000530    GAMD01002483    JAA99107.1    GGFK01005517    MBW38838.1    ADMH02002070    ETN59648.1    GFDG01000286    JAV18513.1    KK853114    KDR11192.1    EDO64676.1    CH902618    KPU78789.1    GFDG01000287    JAV18512.1    EDV40805.1    KPU78790.1    CAEY01002016    KK121266    KFM80098.1    GBBK01003678    JAC20804.1    GFDG01002940    JAV15859.1    GBBI01001703    JAC17009.1    GEMB01001371    JAS01785.1    CP012525    ALC43474.1    CH940647    KRF84967.1    CH916366    EDV97428.1    EDW70538.1    GBZX01001981    JAG90759.1    GBBL01001896    JAC25424.1    GAMC01011802    JAB94753.1    ATLV01015362    ATLV01015363    KE525007    KFB40397.1    GBXI01015505    JAC98786.1    BK007246    DAA34255.1    GDAI01000580    JAI17023.1    GBGD01003027    JAC85862.1    GBBM01002524    JAC32894.1    OUUW01000012    SPP87595.1    AAZO01007334    GBXI01012166    JAD02126.1    GANO01003807    JAB56064.1    CH479219    EDW34785.1    NEVH01017442    PNF24542.1    GDKW01002919    JAI53676.1    CH964272    EDW84912.1    ACPB03017886    GFAC01000167    JAT99021.1    GEZM01093769    JAV56140.1    GAMC01011801    JAB94754.1    CH480815    EDW40674.1    CH379070    KRT09051.1    KRT09052.1    CM000363    CM002912    EDX09666.1    KMY98323.1    KQ971342    EFA04625.1    KRT09047.1    KRT09048.1    CH963876    KRF98552.1    GBYB01014666    JAG84433.1    EDX09614.1    KMY98229.1    AJWK01011464    EDW76928.1    GAKP01004251    JAC54701.1    JXJN01004386    CM000159    KRK00879.1    KA646094    AFP60723.1    KRT09053.1    AM294142    CAL26046.1    EDW40621.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000007151    UP000283053    + More
UP000192247    UP000075880    UP000075902    UP000075903    UP000075840    UP000007062    UP000075886    UP000000673    UP000027135    UP000075882    UP000007801    UP000015104    UP000054359    UP000069272    UP000092553    UP000008792    UP000001070    UP000261500    UP000030765    UP000268350    UP000192221    UP000008744    UP000235965    UP000007798    UP000015103    UP000001292    UP000005226    UP000078200    UP000092443    UP000001819    UP000092445    UP000000304    UP000007266    UP000092461    UP000257200    UP000092460    UP000002282    UP000095301    UP000007635   

PRIDE

A1YVX2    H9JT12    Q1HPI1   

Pfam

PF01652   IF4E        + More
PF07716   bZIP_2
PF04636   PA26

Interpro

IPR001040   TIF_eIF_4E        + More
IPR019770   TIF_eIF_4E_CS       
IPR023398   TIF_eIF4e-like       
IPR004827   bZIP       
IPR029032   AhpD-like       
IPR006730   Sestrin       

SUPFAM

SSF55418   SSF55418        + More
SSF69118   SSF69118       

Gene 3D

3.30.760.10     1.20.1290.10    

ProteinModelPortal

A1YVX2   A0A1E1W208   A0A1E1WNS7   A0A194RG44   A0A194RBB2   Q964Q9   + More
A0A194Q7W7   A0A2A4J1X6   I4DS51   I4DIV4   A0A2H1WC62   A0A212EVY6   A0A3S2L776   H9JT12   Q1HPI1   A0A212EVW2   A0A3S2NS93   A0A194QDU1   A0A2M4BZJ2   A0A1V9Y1B9   A0A2M4BZR9   A0A182IJM0   A0A182TTW9   A0A2M3Z4V4   A0A2Y9D2Z4   A0A2C9GRQ7   Q7QJ05   A0A182R162   T1E8T4   A0A2M4ADZ5   W5J8C8   A0A1L8EIU2   A0A067QP74   A7URN4   A0A182KQJ7   A0A2Y9D2Z0   A0A0P8XVM0   A0A1L8EIG2   B3M6F6   T1KDF0   A0A087URV9   A0A023FI40   A0A182FGM3   A0A1L8EB67   A0A023F732   A0A171A8L4   A0A0M5J818   A0A0Q9WRY3   B4IX96   A0A3B3VLB4   B4LGS3   A0A0C9S1M1   A0A023FVB4   W8BCK9   A0A084VR03   A0A0A1WIZ3   F0J8P5   A0A0K8TSA0   A0A069DQJ0   A0A023GG71   A0A3B0JZU6   A0A2Y9D418   A0A0A1WU02   U5EUM7   A0A1W4VPH5   B4H7Z5   A0A2J7Q7I4   A0A0P4VIG4   B4NJ10   T1IC32   A0A1E1XJ31   A0A1W4VN50   A0A1Y1K7E4   W8BZQ9   B4HJF0   A0A3B5K0V2   A0A1A9UGE0   A0A1A9YI93   A0A0R3P7D6   A0A0R3P7G0   A0A1A9ZU78   B4QLK6   D6WJL4   A0A0R3P7G7   A0A0Q9WZF9   A0A0C9S1K9   B4QKY1   A0A1B0CGM2   B4MX95   A0A034WGM9   A0A3Q1FKS6   A0A1B0AVS9   A0A0R1DVD2   T1PBP2   A0A1I8MY20   A0A0R3P936   A0ANA4   G3PVV7   B4HIW7  

PDB

4AXG     E-value=1.19437e-30,     Score=328

KEGG

100037427    K03259 translation initiation factor 4E | (RefSeq) eukaryotic initiation factor 4E-1

PATHWAY

03013    RNA transport - Bombyx mori (domestic silkworm)
04150    mTOR signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0003743   GO:0005737   GO:0003700   GO:0016281   GO:0000340   GO:0010032   GO:0007060   GO:0001558   GO:0045995   GO:0016070   GO:0000932   GO:1990124   GO:0048136   GO:0002191   GO:0007112   GO:0048137   GO:0048515   GO:0031370   GO:0097482   GO:0071598   GO:0005634   GO:1901031   GO:0045727   GO:0003723   GO:0006413   GO:0015074   GO:0030429   GO:0004003   GO:0006289   GO:0016286  

PANTHER

PTHR11960   PTHR12474  

Length:

191

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01644

Exp number, first 60 AAs:

0.00522

Total prob of N-in:

0.08825

outside

1  -  191

 

 

Pi

190.517658

Theta

159.74447

Tajima's D

0.093068

CLR

0.254597

CSRT

0.395580220988951

Interpretation

Uncertain