Gene

KWMTBOMO12867  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012707

Annotation

PREDICTED:_spermine_synthase_[Amyelois_transitella]

Location

Bomo_Chr22(-):2394104-2412461      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.988

CDS

ATGTCAGTTCACAATATCTTATTGGATTTCTCGATTGAAGCGGCCCGTCTGGAAGATGAAAACGGCCAAAAAGATATCTTTGGACAATTGGAAACTCTATTAAAAGAATATATACCAAATTTGATCCTAGCCACCGACATAAAATTGGAAGATGGTTCATTGAAATTATTAACCGGTAATAAAGGAACGACTGTATCCGTTAGGATGTTTGACCGAGGTTTCATTACTTTAAATATTGAATTTTACAAGGGCGGAAATGAGGAGTCCGTGATCGATCACAAGACTGCCAAAGAACTTGAAAGCAAAATTAAAAAATATATTTCTAGTATAAAGTCACAAACATATATTCCACTAAAGAGATGTTTGTTTGGTAGATATTATCCTAGTTCAGATGGACGTCTCCTCGAATATGATATTGATGAAGTTGTATTTGATCAAGAATCTCCATTCCAAAGAGTTCAAATTGTTCATTCTAAGTCATTAGGAAACATGTTAGTGCTGGATGATTTACAAAATATCTCAGAAGCTGATCTAATTTACACTGAAACTTTGATGCAGAGAAACAAGGAGAATTATGAAGGAAAGGAAATTGTCATACTCGGAGGGGGCGACGGCGCGCTGCTGTACGAGCTGCTAAAAGAGAATCCGAAGTACGTGTGGATGTTGGAAATCGATGAACTAGTCATGAACGCCTGCAACAAGCACCTCAACTCCATCTGCGGCGACGTACTCGAGAAACGCAAGGGACCTAACTATGAGATAATCGTCGCCGACTGCATGATCACCGTCAACAAGTTCATAAAGGAGGGCAAGAAAGTTGACTACATCTTCGGCGACCTCACCGACATCCCCATCTCCGACACCGTAGAGGGAGAAATCTGGGAATTCATGATCACCATCCTCAAAGCTTCCTTCAGAATATTACGGTCTTCTGGGAAGTTTATGACGCACGGGAACGGTGCGACATCCGGCGAGTCCTTGCAACTGTACGAACAAGAGTTATCCAAACTCGATCCTCCGGTCGCCTTCCAAAGGAGCATGGCGTTCGTGCCTTCATTCTTCGAGGACTGGATCTTCTACCAAATCACTTTCAAAGACAAAGGAACTGGAGATGATTAA

Protein

MSVHNILLDFSIEAARLEDENGQKDIFGQLETLLKEYIPNLILATDIKLEDGSLKLLTGNKGTTVSVRMFDRGFITLNIEFYKGGNEESVIDHKTAKELESKIKKYISSIKSQTYIPLKRCLFGRYYPSSDGRLLEYDIDEVVFDQESPFQRVQIVHSKSLGNMLVLDDLQNISEADLIYTETLMQRNKENYEGKEIVILGGGDGALLYELLKENPKYVWMLEIDELVMNACNKHLNSICGDVLEKRKGPNYEIIVADCMITVNKFIKEGKKVDYIFGDLTDIPISDTVEGEIWEFMITILKASFRILRSSGKFMTHGNGATSGESLQLYEQELSKLDPPVAFQRSMAFVPSFFEDWIFYQITFKDKGTGDD

Uniprot

A0A3S2NGV3   A0A2H1WRA0   A0A194RAN0   A0A194Q7Y3   A0A212EVV6   U5EQP4   + More
A0A1Q3F396   A0A1Q3F375   A0A336MET6   A0A1J1J5B5   D2A3T7   A0A1Q3F3G4   A0A1I8JSP5   A0A182V179   Q7Q7G3   A0A2M4CZ60   A0A2M4AV91   Q17LD7   B0W5D7   A0A182WAJ1   A0A084VAU6   A0A336M553   A0A023EPL1   A0A182YLC9   A0A182QE41   A0A182KVZ9   T1EAF7   A0A182XD45   A0A182U983   A0A182N7Y8   A0A182HMH9   W5JWK3   W8BZ43   A0A336MEA3   T1P8X5   A0A1J1J2J3   D3TQJ8   A0A182LZT3   A0A182GGI2   A0A1I8NMW7   A0A067QP78   A0A182RX25   A0A182PGG0   A0A182J4V5   A0A034WUG9   A0A2J7Q7J1   A0A1Y1LXL1   A0A0Q5UF51   A0A0K8V3R5   A0A1W4WCH5   Q9VTW1   A0A0R1DXI9   A0A0P8XSG0   B4N3J4   X2JB05   A0A0J9UJS7   A0A0A1XAE9   A0A1W4UU22   A0A0Q9WT37   A0A0M4EYR0   A0A0Q9XP48   A0A1A9WCZ6   A0A1B0GFR9   A0A1A9UID6   A0A1B0AR16   A0A0L0BWK9   B3NH89   A0A1I8MZL7   I5AMQ9   A0A1W4WNR7   A0A1I8NMW6   B3M7U0   A0A158NEB1   A0A195FL27   Q9VTW0   A0A0M9AB31   B4PGB7   A0A195CB15   B4HFL0   A0A3B0JSF3   A0A088ATI3   X2JGL7   A0A0Q9XNA7   A0A0J9RTU6   Q2M0R0   B4GR83   D0QWS0   A0A1W4UUC2   A0A0C9RWB7   A0A023F8U8   B4LFF3   R4FP22   V5IA78   A0A0L7R7Y7   B4KZZ6   A0A0V0G6B9   B4J341   A0A310SHG3  

Pubmed

26354079    22118469    18362917    19820115    12364791    14747013    + More
17210077    17510324    24438588    24945155    25244985    20966253    20920257    23761445    24495485    25315136    20353571    26483478    24845553    25348373    28004739    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    22936249    25830018    26108605    15632085    21347285    19859648    25474469   

EMBL

RSAL01000108    RVE47242.1    ODYU01010467    SOQ55599.1    KQ460416    KPJ14908.1    + More
KQ459324    KPJ01633.1    AGBW02012108    OWR45630.1    GANO01003195    JAB56676.1    GFDL01013015    JAV22030.1    GFDL01013044    JAV22001.1    UFQT01001061    SSX28686.1    CVRI01000067    CRL06662.1    KQ971348    EFA05567.1    GFDL01013007    JAV22038.1    AAAB01008960    EAA11793.4    GGFL01006444    MBW70622.1    GGFK01011311    MBW44632.1    CH477216    EAT47525.1    DS231842    EDS35257.1    ATLV01004461    KE524214    KFB35090.1    UFQT01000574    SSX25402.1    SSX28685.1    GAPW01002151    JAC11447.1    AXCN02000908    GAMD01000457    JAB01134.1    APCN01004439    ADMH02000201    ETN67384.1    GAMC01001978    JAC04578.1    SSX25401.1    SSX28684.1    KA644595    AFP59224.1    CRL06661.1    EZ423700    ADD19976.1    AXCM01007503    JXUM01011121    JXUM01011122    JXUM01011123    JXUM01011124    JXUM01011125    JXUM01011126    KQ560323    KXJ83054.1    KK853114    KDR11197.1    GAKP01001519    JAC57433.1    NEVH01017442    PNF24549.1    GEZM01046580    JAV77050.1    CH954178    KQS43841.1    GDHF01018813    JAI33501.1    AE014296    AY071085    BT003439    AAF49934.1    AAL48707.1    AAO39442.1    CM000159    KRK01737.1    CH902618    KPU77651.1    CH964095    EDW79199.2    AHN58069.1    CM002912    KMY99205.1    GBXI01006411    JAD07881.1    CH940647    KRF84271.1    CP012525    ALC43687.1    CH933809    KRG05896.1    CCAG010006156    JXJN01002206    JXJN01002207    JRES01001238    KNC24405.1    EDV51546.1    CH379069    EIM52244.1    EDV38813.1    ADTU01013232    ADTU01013233    KQ981490    KYN41051.1    BT001432    AAF49935.1    AAN71187.1    KQ435694    KOX80905.1    EDW94281.2    KQ978023    KYM97895.1    CH480815    EDW41241.1    OUUW01000002    SPP76286.1    AHN58070.1    KRG05895.1    KMY99206.1    EAL30870.1    CH479188    EDW40268.1    FJ821035    ACN94784.1    GBYB01002798    GBYB01013245    JAG72565.1    JAG83012.1    GBBI01000875    JAC17837.1    EDW69251.1    GAHY01001074    JAA76436.1    GALX01001660    JAB66806.1    KQ414637    KOC66995.1    EDW18008.2    GECL01002523    JAP03601.1    CH916366    EDV96112.1    KQ766607    OAD53629.1   

Proteomes

UP000283053    UP000053240    UP000053268    UP000007151    UP000183832    UP000007266    + More
UP000069272    UP000075903    UP000007062    UP000008820    UP000002320    UP000075920    UP000030765    UP000076408    UP000075886    UP000075882    UP000076407    UP000075902    UP000075884    UP000075840    UP000000673    UP000095301    UP000075883    UP000069940    UP000249989    UP000095300    UP000027135    UP000075900    UP000075885    UP000075880    UP000235965    UP000008711    UP000192223    UP000000803    UP000002282    UP000007801    UP000007798    UP000192221    UP000008792    UP000092553    UP000009192    UP000091820    UP000092444    UP000078200    UP000092460    UP000037069    UP000001819    UP000005205    UP000078541    UP000053105    UP000078542    UP000001292    UP000268350    UP000005203    UP000008744    UP000053825    UP000001070   

PRIDE

Q9VTW1    X2JB05    Q9VTW0    X2JGL7   

Pfam

PF17284   Spermine_synt_N        + More
PF17950   SpmSyn_N

Interpro

IPR015576   Spermine_synthase_animal        + More
IPR037163   Spermidine_synt_N_sf       
IPR030374   PABS       
IPR029063   SAM-dependent_MTases       
IPR030373   PABS_CS       
IPR035246   Spermidine_synt_N       
IPR001045   Spermi_synthase       
IPR040900   SpmSyn_N       

SUPFAM

SSF53335   SSF53335       

Gene 3D

2.30.140.10    

ProteinModelPortal

A0A3S2NGV3   A0A2H1WRA0   A0A194RAN0   A0A194Q7Y3   A0A212EVV6   U5EQP4   + More
A0A1Q3F396   A0A1Q3F375   A0A336MET6   A0A1J1J5B5   D2A3T7   A0A1Q3F3G4   A0A1I8JSP5   A0A182V179   Q7Q7G3   A0A2M4CZ60   A0A2M4AV91   Q17LD7   B0W5D7   A0A182WAJ1   A0A084VAU6   A0A336M553   A0A023EPL1   A0A182YLC9   A0A182QE41   A0A182KVZ9   T1EAF7   A0A182XD45   A0A182U983   A0A182N7Y8   A0A182HMH9   W5JWK3   W8BZ43   A0A336MEA3   T1P8X5   A0A1J1J2J3   D3TQJ8   A0A182LZT3   A0A182GGI2   A0A1I8NMW7   A0A067QP78   A0A182RX25   A0A182PGG0   A0A182J4V5   A0A034WUG9   A0A2J7Q7J1   A0A1Y1LXL1   A0A0Q5UF51   A0A0K8V3R5   A0A1W4WCH5   Q9VTW1   A0A0R1DXI9   A0A0P8XSG0   B4N3J4   X2JB05   A0A0J9UJS7   A0A0A1XAE9   A0A1W4UU22   A0A0Q9WT37   A0A0M4EYR0   A0A0Q9XP48   A0A1A9WCZ6   A0A1B0GFR9   A0A1A9UID6   A0A1B0AR16   A0A0L0BWK9   B3NH89   A0A1I8MZL7   I5AMQ9   A0A1W4WNR7   A0A1I8NMW6   B3M7U0   A0A158NEB1   A0A195FL27   Q9VTW0   A0A0M9AB31   B4PGB7   A0A195CB15   B4HFL0   A0A3B0JSF3   A0A088ATI3   X2JGL7   A0A0Q9XNA7   A0A0J9RTU6   Q2M0R0   B4GR83   D0QWS0   A0A1W4UUC2   A0A0C9RWB7   A0A023F8U8   B4LFF3   R4FP22   V5IA78   A0A0L7R7Y7   B4KZZ6   A0A0V0G6B9   B4J341   A0A310SHG3  

PDB

3C6M     E-value=5.17328e-62,     Score=602

KEGG

101742636    K00802 spermine synthase [EC:2.5.1.22] | (RefSeq) spermine synthase

PATHWAY

00270    Cysteine and methionine metabolism - Bombyx mori (domestic silkworm)
00330    Arginine and proline metabolism - Bombyx mori (domestic silkworm)
00410    beta-Alanine metabolism - Bombyx mori (domestic silkworm)
00480    Glutathione metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0006596   GO:0016740   GO:0006597   GO:0016768  

PANTHER

PTHR46315  

Length:

372

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00903

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00266

outside

1  -  372

 

 

Pi

189.85845

Theta

178.351679

Tajima's D

0.23288

CLR

1.071347

CSRT

0.435778211089446

Interpretation

Possibly Positive selection