Gene

KWMTBOMO12866  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012673

Annotation

chromatin_modifying_protein_1b_[Bombyx_mori]

Location

Bomo_Chr22(+):2388642-2390955      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.526

CDS

ATGGAAAAACATTTATTTAATTTAAAATTTGCTGTGAAGGAGTTAGAACGCAATTCAAAAAAATGTGAAAAAGAAGAAAAACTAGAAAAAGAGAAAGCTAAGAAAGCTATACAGAAAGGTAACATGGAGGGGGCACGAATACATGCAGAGAATGCGATTAGGCAGAAGAACCAAGCTCTCAACTACCTAAGGATGTCAGCGAGAGTTGATGCTGTTTCTAGCAGAGTTCAAACAGCATTAACAACTAGAAAGGTTACAAATTCAATGGCCGGTGTAGTAAAAGCAATGGATGCAGCAATGAAATCAATGAACTTAGAGAAAATTTCTACACTAATGGACAAGTTCGAGAGTCAGTTTGAGGATTTGGATGTCCAGTCGTCCTACATGGAGAATGCGATGTCACAAACTACGACAACTACAGTTCCCCAAGGAGACGTTGATAATTTACTTCAACAGGTTGCAGATGAAGCTGGGTTGGAGCTAAATATGGAACTTCCATCTGGTGTTCCGAGCACATCTATTGGTACCGCAACTGTTGTTTCCCAAGAACAAGACGAACTCACACAGAGACTTGCCAGGTTGAGACAAGCAGAATAA

Protein

MEKHLFNLKFAVKELERNSKKCEKEEKLEKEKAKKAIQKGNMEGARIHAENAIRQKNQALNYLRMSARVDAVSSRVQTALTTRKVTNSMAGVVKAMDAAMKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDNLLQQVADEAGLELNMELPSGVPSTSIGTATVVSQEQDELTQRLARLRQAE

Uniprot

Q2F5S8   A0A2A4IVF6   A0A3S2NXR5   A0A1E1WL30   H9JT11   S4PCS8   + More
A0A194RBQ1   I4DQA5   A0A212EVX1   A0A2H1WRD7   I4DS50   A0A1B0FQ43   A0A1A9YG20   A0A1A9V4E9   A0A1B0AQZ5   A0A1A9Z916   A0A0K8UPU9   A0A034WUB6   A0A1Y1N9P3   A0A1A9WEL9   A0A1W4WLQ4   W8BPE0   A0A158NXW3   A0A1B0D5J2   T1PEI8   A0A1I8NZY4   A0A1L8EE55   A0A0M4EPR5   U5EUE4   B4IFU7   B3NHP9   B4QPV2   Q95SH2   A0A0L0BVA3   A0A1A9YLH4   B4LDA4   B3M879   B4N4E3   A0A0T6B7Z1   A0A1W4UR06   B4PIZ9   A0A2J7RE20   A0A232F6B6   K7IUS0   A0A067RM21   A0A2P8XNQ7   R4UJ87   B4KY74   A0A151IVZ9   F4WR11   A0A1L8DVU3   E9J5W3   A0A3B0J5Z4   A0A195FUP8   W5J6P1   A0A224XX49   A0A069DPC6   B4J1U1   Q16K46   Q2LYX7   A0A1B6DSY8   A0A2M3Z7X4   A0A2M4BZY3   A0A0P4VTU0   R4FNR0   A0A1B0GJN0   A0A023EJE6   A0A026WGA9   A0A2M4AL57   A0A1B6F177   A0A1B6I3Q9   A0A182WXB6   A0A182K587   A0A1B6MRV6   A0A0K8S723   A0A182QT30   Q7Q5C5   A0A182RU45   A0A182I4A5   A0A182LKM6   A0A182VFP4   A0A182WBX2   A0A182NIX1   A0A1Q3FXK3   A0A2M4ALV8   A0A1J1I1E1   A0A2A3ETG5   V9IIQ8   A0A182FGG5   A0A182TVR6   A0A336LGQ5   A0A182PS02   A0A0L7RH40   A0A182Y7W2   A0A1S3DHF2   A0A154PHG2   B0W866   E0VLK4   T1DTF8   D6WKC0  

Pubmed

19121390    23622113    26354079    22651552    22118469    25348373    + More
28004739    24495485    21347285    25315136    17994087    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26108605    18057021    17550304    28648823    20075255    24845553    29403074    21719571    21282665    20920257    23761445    26334808    17510324    15632085    27129103    24945155    26483478    24508170    30249741    26823975    12364791    14747013    17210077    20966253    25244985    20566863    18362917    19820115   

EMBL

DQ311345    ABD36289.1    NWSH01005788    PCG63957.1    RSAL01000108    RVE47243.1    + More
GDQN01003340    JAT87714.1    BABH01030749    GAIX01004001    JAA88559.1    KQ460416    KPJ14909.1    AK404015    KQ459324    BAM20095.1    KPJ01634.1    AGBW02012108    OWR45629.1    ODYU01010467    SOQ55598.1    AK405422    BAM20740.1    CCAG010006151    JXJN01002187    GDHF01023607    JAI28707.1    GAKP01001172    JAC57780.1    GEZM01013832    JAV92307.1    GAMC01005773    JAC00783.1    ADTU01003635    AJVK01025330    KA646348    AFP60977.1    GFDG01001853    JAV16946.1    CP012525    ALC44155.1    GANO01001514    JAB58357.1    CH480834    EDW46534.1    CH954178    EDV51844.1    CM000363    CM002912    EDX10980.1    KMZ00432.1    AE014296    AY060798    AAF49241.2    AAL28346.1    AHN58133.1    JRES01001278    KNC23995.1    CH940647    EDW71011.1    KRF85245.1    CH902618    EDV41018.1    CH964095    EDW79017.1    LJIG01009241    KRT83474.1    CM000159    EDW94590.1    NEVH01005279    PNF39077.1    NNAY01000905    OXU25988.1    AAZX01005919    KK852594    KDR20659.1    PYGN01001636    PSN33629.1    KC632300    AGM32114.1    CH933809    EDW19793.1    KQ980882    KYN11953.1    GL888280    EGI63369.1    GFDF01003538    JAV10546.1    GL768208    EFZ11793.1    OUUW01000002    SPP77307.1    KQ981261    KYN44146.1    ADMH02002104    ETN59068.1    GFTR01003346    JAW13080.1    GBGD01002996    JAC85893.1    CH916366    EDV98021.1    CH477978    EAT34655.1    EAT34656.1    EJY58022.1    CH379069    EAL29732.1    GEDC01008549    JAS28749.1    GGFM01003850    MBW24601.1    GGFJ01009485    MBW58626.1    GDKW01001196    JAI55399.1    ACPB03000025    GAHY01001194    JAA76316.1    AJWK01021987    JXUM01000859    GAPW01004492    JAC09106.1    KK107238    QOIP01000007    EZA54706.1    RLU20711.1    GGFK01008205    MBW41526.1    GECZ01025713    GECZ01003838    JAS44056.1    JAS65931.1    GECU01031521    GECU01026128    JAS76185.1    JAS81578.1    GEBQ01001329    JAT38648.1    GBRD01016756    GBRD01016755    GDHC01015530    GDHC01013609    GDHC01009342    GDHC01006504    JAG49072.1    JAQ03099.1    JAQ05020.1    JAQ09287.1    JAQ12125.1    AXCN02000475    AAAB01008960    EAA11406.3    APCN01002295    GFDL01002809    JAV32236.1    GGFK01008454    MBW41775.1    CVRI01000035    CRK92662.1    KZ288191    PBC34439.1    JR046460    AEY60199.1    UFQT01000003    SSX17144.1    KQ414592    KOC70180.1    KQ434905    KZC11252.1    DS231857    EDS38691.1    DS235271    EEB14260.1    GAMD01000984    JAB00607.1    KQ971342    EFA03602.1   

Proteomes

UP000218220    UP000283053    UP000005204    UP000053240    UP000053268    UP000007151    + More
UP000092444    UP000092443    UP000078200    UP000092460    UP000092445    UP000091820    UP000192223    UP000005205    UP000092462    UP000095301    UP000095300    UP000092553    UP000001292    UP000008711    UP000000304    UP000000803    UP000037069    UP000008792    UP000007801    UP000007798    UP000192221    UP000002282    UP000235965    UP000215335    UP000002358    UP000027135    UP000245037    UP000009192    UP000078492    UP000007755    UP000268350    UP000078541    UP000000673    UP000001070    UP000008820    UP000001819    UP000015103    UP000092461    UP000069940    UP000053097    UP000279307    UP000076407    UP000075881    UP000075886    UP000007062    UP000075900    UP000075840    UP000075882    UP000075903    UP000075920    UP000075884    UP000183832    UP000242457    UP000069272    UP000075902    UP000075885    UP000053825    UP000076408    UP000079169    UP000076502    UP000002320    UP000009046    UP000007266   

PRIDE

Q2F5S8    H9JT11    Q95SH2   

Pfam

PF03357   Snf7

Interpro

IPR005024   Snf7_fam        + More
IPR042277   IST1-like       

Gene 3D

1.20.1260.60    

ProteinModelPortal

Q2F5S8   A0A2A4IVF6   A0A3S2NXR5   A0A1E1WL30   H9JT11   S4PCS8   + More
A0A194RBQ1   I4DQA5   A0A212EVX1   A0A2H1WRD7   I4DS50   A0A1B0FQ43   A0A1A9YG20   A0A1A9V4E9   A0A1B0AQZ5   A0A1A9Z916   A0A0K8UPU9   A0A034WUB6   A0A1Y1N9P3   A0A1A9WEL9   A0A1W4WLQ4   W8BPE0   A0A158NXW3   A0A1B0D5J2   T1PEI8   A0A1I8NZY4   A0A1L8EE55   A0A0M4EPR5   U5EUE4   B4IFU7   B3NHP9   B4QPV2   Q95SH2   A0A0L0BVA3   A0A1A9YLH4   B4LDA4   B3M879   B4N4E3   A0A0T6B7Z1   A0A1W4UR06   B4PIZ9   A0A2J7RE20   A0A232F6B6   K7IUS0   A0A067RM21   A0A2P8XNQ7   R4UJ87   B4KY74   A0A151IVZ9   F4WR11   A0A1L8DVU3   E9J5W3   A0A3B0J5Z4   A0A195FUP8   W5J6P1   A0A224XX49   A0A069DPC6   B4J1U1   Q16K46   Q2LYX7   A0A1B6DSY8   A0A2M3Z7X4   A0A2M4BZY3   A0A0P4VTU0   R4FNR0   A0A1B0GJN0   A0A023EJE6   A0A026WGA9   A0A2M4AL57   A0A1B6F177   A0A1B6I3Q9   A0A182WXB6   A0A182K587   A0A1B6MRV6   A0A0K8S723   A0A182QT30   Q7Q5C5   A0A182RU45   A0A182I4A5   A0A182LKM6   A0A182VFP4   A0A182WBX2   A0A182NIX1   A0A1Q3FXK3   A0A2M4ALV8   A0A1J1I1E1   A0A2A3ETG5   V9IIQ8   A0A182FGG5   A0A182TVR6   A0A336LGQ5   A0A182PS02   A0A0L7RH40   A0A182Y7W2   A0A1S3DHF2   A0A154PHG2   B0W866   E0VLK4   T1DTF8   D6WKC0  

PDB

6E8G     E-value=2.58179e-48,     Score=481

KEGG

692931    K12197 charged multivesicular body protein 1 | (RefSeq) chromatin modifying protein 1b

PATHWAY

04144    Endocytosis - Bombyx mori (domestic silkworm)

GO

GO:0007034   GO:0005770   GO:0045177   GO:0032509   GO:0045324   GO:0015031   GO:0005771   GO:0000815   GO:0003676   GO:0020037   GO:0051082   GO:0015074   GO:0030429   GO:0004003   GO:0005634   GO:0006289   GO:0016286  

Length:

198

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00041

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04072

outside

1  -  198

 

 

Pi

138.150482

Theta

163.145713

Tajima's D

-0.705278

CLR

0.894583

CSRT

0.191340432978351

Interpretation

Uncertain