SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12863  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012710
Annotation
BWK-1-like_protein_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.129 Nuclear   Reliability : 1.675
 

Sequence

CDS
ATGAGTTTCGAAAACAACAGTAACGGCAATGAAAAAGAAGAACGTAAATATTCACACGAGCGCAACAAATCCGACGAATTACAACTATCACGGACTGACATGAACATGTTAATAATGAATTATCTAGTAACAGAGGGCTTCAAAGAAGCAGCCTTGAAGTTTCAACAGGAGGCAGGTCTACAAGAGCCAGCCCTATGCAGTTCCTTGGACGAGAGGATAATGATCCGTGAAGCAGTACAGGGTGGTAGAATCCCTGAAGCTATTGCTATGGTCAATTCATTACATCCTGAGCTTTTAGATAATGATAGATATTTATACTTCCATTTGCAGCAATTACAACTTTTGGAGCTGATTCGTGCAGGACGTGCTGAAGAGGCATTAGCCTTTGCAAGTGCAACGCTCGCAGAGGCTGGTGCCAATGATGCCAATGCTCTGACTGAACTAGAGAGGTCATTGGCTTTACTGGCCTTCCCTGATCCACATACCTCACCCTTTGCTGATCTGCTGCTGCCTTCGCACGGTCAAAAGATTGCAAGTGAACTCAATGCGGCTATACTCAAAATGGAGAATCAAGAATATACAAATCCAAAGCTGTGCAGTCTTCTTCGCATGATCCTGTGGTCTCAGAGTGAGCTGGACAAGCACAACATCAAGTACCCTAAGATGACAGATCTTGCTAATGCTACTATAGGGCAACCAAAGTAA
Protein
MSFENNSNGNEKEERKYSHERNKSDELQLSRTDMNMLIMNYLVTEGFKEAALKFQQEAGLQEPALCSSLDERIMIREAVQGGRIPEAIAMVNSLHPELLDNDRYLYFHLQQLQLLELIRAGRAEEALAFASATLAEAGANDANALTELERSLALLAFPDPHTSPFADLLLPSHGQKIASELNAAILKMENQEYTNPKLCSLLRMILWSQSELDKHNIKYPKMTDLANATIGQPK

Summary

EMBL
BABH01030752    DQ311247    ABD36192.1    GDQN01009963    JAT81091.1    AGBW02012108    + More
OWR45627.1    NWSH01005788    PCG63954.1    PCG63953.1    PCG63955.1    GAIX01013826    JAA78734.1    ODYU01012874    SOQ59393.1    AK404018    KQ459324    BAM20098.1    KPJ01636.1    JTDY01001367    KOB74059.1    KQ460416    KPJ14911.1    RSAL01000108    RVE47245.1    DS235098    EEB11900.1    NNAY01003649    OXU19053.1    KC740763    AGM32587.1    KK853376    KDR08045.1    NEVH01016289    PNF26336.1    KK107183    QOIP01000011    EZA55876.1    RLU16793.1    GL451281    EFN79548.1    LBMM01002114    KMQ95260.1    KZ288266    PBC30123.1    JR047370    AEY60394.1    UFQT01002369    SSX33320.1    KQ982762    KYQ51086.1    GL435531    EFN73244.1    KQ980439    KYN16053.1    KQ976692    KYM77856.1    ADTU01018847    KQ414670    KOC64374.1    KQ977294    KYN03965.1    GDAI01000030    JAI17573.1    KQ981693    KYN37768.1    GFDF01000183    JAV13901.1    GFDF01000182    JAV13902.1    JXUM01054005    GAPW01004010    KQ561800    JAC09588.1    KXJ77499.1    KQ971342    EFA03726.1    CH477291    EAT44580.1    GL888406    EGI61445.1    AJWK01031027    GFDL01009275    JAV25770.1    AJVK01059336    GALA01000882    JAA93970.1    LRGB01000745    KZS16169.1    APGK01037392    KB740948    KB632288    ENN77313.1    ERL91541.1    PYGN01000551    PSN44408.1    ATLV01015218    KE525003    KFB40237.1    DS232046    EDS33035.1    GEZM01069078    JAV66659.1    GANO01001609    JAB58262.1    GL732669    EFX67736.1    AAAB01008811    EAA04925.2    EDO64476.1    EGK96272.1    APCN01004735    KK117248    KFM69936.1    GDIQ01258474    JAJ93250.1    GEDC01003495    JAS33803.1    MWRG01009605    PRD26998.1    GECZ01000046    JAS69723.1    GECU01020429    JAS87277.1    GECZ01015267    JAS54502.1    GECZ01006057    JAS63712.1    GEDC01011655    JAS25643.1    GEBQ01024807    JAT15170.1    AXCN02002234    AXCM01000256    JH431972    GGFM01004400    MBW25151.1    GGFK01006905    MBW40226.1    GGFL01002621    MBW66799.1    GAMC01000687    GAMC01000684    JAC05869.1    ADMH02000394    ETN66710.1    GAMD01002579    JAA99011.1    GGFJ01008993    MBW58134.1    GAKP01023428    JAC35530.1    GDHF01012004    JAI40310.1    GG666662    EEN45129.1    AMQN01012285    KB309421    ELT94445.1    HACA01013750    CDW31111.1    EZ423271    ADD19547.1   
Pfam
PF10607   CLTH        + More
PF08513   LisH
Interpro
IPR024964   CTLH/CRA        + More
IPR006594   LisH       
IPR013144   CRA_dom       
IPR006595   CTLH_C       

Ontologies

Topology

Length:
234
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.000950000000000001
Exp number, first 60 AAs:
0.00075
Total prob of N-in:
0.06398
outside
1  -  234
 
 

Population Genetic Test Statistics

Pi
224.182989
Theta
181.331331
Tajima's D
0.64054
CLR
0.000666
CSRT
0.549022548872556
Interpretation
Possibly Positive selection
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