SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12861
Pre Gene Modal
BGIBMGA012711
Annotation
PREDICTED:_uncharacterized_protein_LOC101744402_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.981
 

Sequence

CDS
ATGAATATGGATTCTCGGGCTGCAAAGCTTGAGAATTATAATTTTGTTAATAAAAATGAATGTGATAAACCTCTTATTGATACTCCACAATGTACCCCAGCTAACAGTCACAACGTTGTTCATAAGTTGTTTAATAGGGAGATCTTAGGCTGTACATCAAGAAAATACAATGAAAGGAGTCGTAAAGTATTTGACAGAATTCCACCCCGACTAAGGTTCTGTCTTATGGATATTGTGCCAATGTCATATCTTAGGGAGCATGTGTTCATGGGATTTTCACAATGTGGACAGTTTTTACTCAGTTTTACATATAGCTGTAACTCACAAGTGTACTTCAGAGAAAGTTCGAAGTTTACCCTTCACTTTCTTTTGTGGGTTCCTGGTCGAGTGGTCCGTCCAGTGCACAGTGTGCCTCTGTTTGGAGATGACAGCGTTGACAGTAAAGTTACCATATCAATGGCACAATGGAAGCATAACCCTGGTGTGCTTGTTGTTTATGGTATTGCAGATTCATGCTCGGAACGATCCTACCTCAGTGTAATTGGTGTTCCTCGTTTAGGATGTAAGAAATGTGCAGCATTTTCTAGAGATGAAGGTGATTTAAACTGGGGTAAAAGATGTCTGGAACACAACTTCGCCATTCACACAAAGTTCTTCTGCACATCTGATTCCAGCATGTACGAACCGGTGGTGCAACTGGCGTACTCTAACCAAATCATCATATACACCGATTTTATACACATACTCGAAATAGACTTCGTTAAACCGGACCAAGAAAGACATGAAGTAATTGAACACACAAAGTTTGCTTTGGATAGAGAAGAACTTAGTTCAATGGATACAAATCCTAGTACACCAGCATCAGATGTCTCTGCGGCCTTTCAATCTCCCAAATATCAGAATAACGTCGTTCAGAATATTTTAGCGGACTTCTCGGATTTAGAAATGGAACCGTATCAACTGTCTCGGCCGGTGCACGTGCCCGACGTCATGGGACAGGAGCTGTGCATCCAGGCCGCGTCCATATCGCACCACCTAGTCGAGGAGTGGGAGGGCCCGTCGCCTTCCATACGGACCTTGATAAGTCCTCCGCTAAGGTCTCCGAGGCGACGTCCCGCAGAGAGCATGTCTAGGTTTAACGAAACCCACAGAATAAACGCTGAAAAGGCCTACGAATTCGTCGAGGAGACCGAAACGAAGTGTGAGAAATTGAGTTTGTTCAGGAAACGGAGGCTAGCCGATAAGAAATACGAATTTTCGGAGGACAACAACGAGAACATTGTGCCCTTCAGGGTGTTGCGGAGCAATAGGAAGTATTACATCGGCGCGACGGGCAGCAAGGGCGGCGTGAAGCGACCCAAGTCGCCGCCCGTGGAGAGCGTGGTGCTGAGGACCCACAACCAGATCAGCCGGCCCCCCTCCCCCGGCTGCGAGCTCAAGAACCCGGGCTTGTCTGCCCTGGAGTCGGATCACAATAGCGAATCGGAGTACAGAGTGATGGAGATGCTGGACGACGGCTCGCTGAAGACGGTGTCGGTGCACGACAACACGTCCAAAACACTCTCCGACTGCCCCGTGAACGTCCACGACCCTTACCTAGTGCACTCCGGCAATTCGAAATGCAGCAAATTCTTTACGAGGTACTTTGTTGAGAGCGACGATGAAATCACTTCAATCCTCACAGATTCCGAAGACGACTGCATGTCGGGGTACCACGTGGCGCTGCCGCTGGCGGCGCACGGCGCGGGGTACGCGGCGCTGCAGGGCGTGGGCGCGGCGGGCTGGGAGCGCGCGGCGCCGGCGCTGGCGGTGCGCGCGCAGCAACGCTCGCTCGACACGGAGCTGCTGTGCAACGAGGTCTGCGGCCGCCTGTGCAACATCAACGGCAAGAAGTTCATCTACTGCTTCGACTGGGGCTGCCACGTCATCGACGTCTGCCAGAGCAGCGGCTGTCTGTCCGGGTTGTGTGCGATGTGGCTGTGGGCGAGCGAGGAGGGCGGCGCGGCGGCGGCGTGCGCGCCGTGCCGGGACGCCAGCGCGGGCTGCCTGCTGCACCGCCACCAGTACGCAGCCGAGTGTTTGTTCGTGTGGGATCTAGTCAGCGGTGTGTACCGCACGGAGAGAGTCGCCATGGCGGAAGATTCGAGTCAAGAGGGATCTAGAGTTTCAGGAGCGGACCGAGCGAGGGACCTTGCCAAAAAATTAGGTCCAATAAACATGCCGCCCGGAAACGAAAACAGACTGCTGACGACGCTGACGGGACGATCGTTGAAGAGGCTGACGGACGTGGACAACTGTATAGAGATCACGAAGAACCACCCCGATAGTTCCGAATCCGAGTCCGAGTCCGAAGAGGACAGCGACTACGACTGA
Protein
MNMDSRAAKLENYNFVNKNECDKPLIDTPQCTPANSHNVVHKLFNREILGCTSRKYNERSRKVFDRIPPRLRFCLMDIVPMSYLREHVFMGFSQCGQFLLSFTYSCNSQVYFRESSKFTLHFLLWVPGRVVRPVHSVPLFGDDSVDSKVTISMAQWKHNPGVLVVYGIADSCSERSYLSVIGVPRLGCKKCAAFSRDEGDLNWGKRCLEHNFAIHTKFFCTSDSSMYEPVVQLAYSNQIIIYTDFIHILEIDFVKPDQERHEVIEHTKFALDREELSSMDTNPSTPASDVSAAFQSPKYQNNVVQNILADFSDLEMEPYQLSRPVHVPDVMGQELCIQAASISHHLVEEWEGPSPSIRTLISPPLRSPRRRPAESMSRFNETHRINAEKAYEFVEETETKCEKLSLFRKRRLADKKYEFSEDNNENIVPFRVLRSNRKYYIGATGSKGGVKRPKSPPVESVVLRTHNQISRPPSPGCELKNPGLSALESDHNSESEYRVMEMLDDGSLKTVSVHDNTSKTLSDCPVNVHDPYLVHSGNSKCSKFFTRYFVESDDEITSILTDSEDDCMSGYHVALPLAAHGAGYAALQGVGAAGWERAAPALAVRAQQRSLDTELLCNEVCGRLCNINGKKFIYCFDWGCHVIDVCQSSGCLSGLCAMWLWASEEGGAAAACAPCRDASAGCLLHRHQYAAECLFVWDLVSGVYRTERVAMAEDSSQEGSRVSGADRARDLAKKLGPINMPPGNENRLLTTLTGRSLKRLTDVDNCIEITKNHPDSSESESESEEDSDYD

Summary

Pfam
PF14939   DCAF15_WD40
Interpro
IPR032734   DCAF15_WD40        + More
IPR038914   DCAF15       

Ontologies

Topology

Length:
790
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0937
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00419
outside
1  -  790
 
 

Population Genetic Test Statistics

Pi
147.609686
Theta
149.040343
Tajima's D
-0.37903
CLR
0.624121
CSRT
0.279586020698965
Interpretation
Uncertain
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