Gene

KWMTBOMO12860  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012671

Annotation

PREDICTED:_ubiquitin-like_protein_4A_[Papilio_machaon]

Location

Bomo_Chr22(+):2345612-2346491      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.36

CDS

ATGAAAATAACCGTTAAGCAGTTGCAGGGAGGTGAATGTTTAATAGATATATATCCAAGTATGCTCATATCAGAGTTGAAAAGGCATGTTGCACGAAAGCTGCATATACCTGTCGAACAACAAAAACTACTGCTACTTGGTAGAACTTTACTGGATGATCACACTATACAAATGTACCCTAACATCAAAGAAGGTACTAAGTTAAATTTGGTTGTGAAGAAACCGGAATCACTTTATGATGCATCCTTTAAGCATTACAAAAGACAAGGCATGTCAGACAAGGATGCTGCAAATACTGCAAACAAACTTCTGAGGATTGTTCAAGAGAAGTTTGATAAAATGTCCTGGGATGAAGTTGACAGACTTTGCTATGACTGCCTGCTGGACGAAAGAGGTATAAGGCGACCAGCCTACATTGAGAATGACATCGAGATTGATGATATGTTTAATTTGTGA

Protein

MKITVKQLQGGECLIDIYPSMLISELKRHVARKLHIPVEQQKLLLLGRTLLDDHTIQMYPNIKEGTKLNLVVKKPESLYDASFKHYKRQGMSDKDAANTANKLLRIVQEKFDKMSWDEVDRLCYDCLLDERGIRRPAYIENDIEIDDMFNL

Uniprot

H9JT09   A0A437BA15   A0A194RBQ7   A0A212EW06   A0A2A4IWA9   A0A2H1V995   + More
A0A194Q8C0   S4PWX6   A0A0L7LFA6   D6WYC0   B4LZ86   T1GBF2   A0A1Q3FAE9   A0A1Y1JWM1   A0A182QF67   A0A182NA82   W8BIM1   A0A1W4UM38   A0A182F8C7   A0A2M4CK31   A0A2M4C364   A0A2M3Z9Q3   A0A2M4ARE9   A0A0K8TP43   A0A154PTR7   B4QV15   B4IBA2   A0A0L0C7B6   B0WA53   B4KCD3   A0A2M4CJ37   A0A0K8URH7   A0A182PA57   B3P0D5   Q9VEC8   A0A411G6P4   A0A182YKI7   B3LYN9   Q17E61   A0A0M9A1W9   A0A182R3N7   A0A034UZ55   A0A0C9QGD6   A0A182T674   A0A023EGE9   A0A0A1XFE1   A0A1I8MN06   B4PL70   A0A182M0F8   A0A1L8EBP9   A0A0T6B7A1   B4IVV0   A0A2A3EG48   V9IIZ3   A0A087ZY80   A0A182VX53   A0A0L7R0J4   A0A0J7L2J9   A0A182GUG6   A0A182K0N2   A0A1C7CZV6   A0A026WD36   A0A151IHK2   A0A182U7S4   A0A182XI99   Q7QC06   A0A182HT86   A0A0M4EM54   A0A182UXV5   A0A151JSN1   E2C9K9   A0A182J7U9   A0A195DSY0   A0A195ATW3   A0A158NPW2   A0A1L8DT39   A0A3L8D8M4   A0A1S4E8Z8   B4JUS9   A0A1I8P7V7   A0A0A9Z5X8   A0A310S988   E1ZZS7   C4WW88   K7J7Z0   A0A3B0JMF5   A0A1B0ETS7   U5EQW3   B4NB52   A0A0K8SYX8   Q293V5   A0A232FHM2   A0A1B6E7Z8   B4GLL0   A0A1W4XR76   A0A1B0D1Y4   T1E394   G1KDH3   A0A224XZT0   A0A0P4VJY9  

Pubmed

19121390    26354079    22118469    23622113    26227816    18362917    + More
19820115    17994087    28004739    24495485    26369729    26108605    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25244985    17510324    25348373    24945155    25830018    25315136    17550304    26483478    20966253    24508170    12364791    14747013    17210077    20798317    21347285    30249741    25401762    26823975    20075255    15632085    28648823    24330624    27129103   

EMBL

BABH01030753    RSAL01000108    RVE47248.1    KQ460416    KPJ14914.1    AGBW02012108    + More
OWR45624.1    NWSH01005788    PCG63949.1    ODYU01001347    SOQ37405.1    KQ459324    KPJ01639.1    GAIX01006023    JAA86537.1    JTDY01001367    KOB74064.1    KQ971356    EFA09130.1    CH940650    EDW67093.1    CAQQ02076932    GFDL01010515    JAV24530.1    GEZM01098858    GEZM01098857    JAV53709.1    AXCN02000218    GAMC01013435    GAMC01013434    GAMC01013433    GAMC01013432    GAMC01013431    JAB93121.1    GGFL01001080    MBW65258.1    GGFJ01010601    MBW59742.1    GGFM01004459    MBW25210.1    GGFK01010055    MBW43376.1    GDAI01001687    JAI15916.1    KQ435090    KZC14590.1    CM000364    EDX12498.1    CH480827    EDW44660.1    JRES01000819    KNC28165.1    DS231869    EDS40882.1    CH933806    EDW13742.1    GGFL01001081    MBW65259.1    GDHF01023032    JAI29282.1    CH954181    EDV48650.1    AE014297    BT001575    AAF55498.1    AGK45244.1    MH365749    QBB01558.1    CH902617    EDV42954.1    CH477285    EAT44757.1    KQ435760    KOX75620.1    GAKP01022701    JAC36251.1    GBYB01013603    JAG83370.1    GAPW01005889    JAC07709.1    GBXI01004637    JAD09655.1    CM000160    EDW95852.1    AXCM01000651    GFDG01002622    JAV16177.1    LJIG01009368    KRT83219.1    CH894227    EDX00392.1    KZ288266    PBC30126.1    JR049650    AEY61030.1    KQ414670    KOC64370.1    LBMM01001055    KMQ97007.1    JXUM01089218    KQ563753    KXJ73366.1    KK107263    EZA53868.1    KQ977606    KYN01433.1    AAAB01008859    EAA07919.3    APCN01000422    CP012526    ALC46490.1    KQ982014    KYN30614.1    GL453868    EFN75348.1    KQ980487    KYN15902.1    KQ976745    KYM75497.1    ADTU01022788    GFDF01004461    JAV09623.1    QOIP01000011    RLU16870.1    CH916374    EDV91249.1    GBHO01006399    GDHC01015567    JAG37205.1    JAQ03062.1    KQ763490    OAD55023.1    GL435522    EFN73300.1    ABLF02029217    AK341922    BAH72158.1    OUUW01000007    SPP83444.1    AJWK01010375    GANO01003091    JAB56780.1    CH964232    EDW81016.1    GBRD01007726    JAG58095.1    CM000070    EAL29109.1    NNAY01000231    OXU29837.1    GEDC01003261    JAS34037.1    CH479185    EDW38434.1    AJVK01022456    GALA01000570    JAA94282.1    GFTR01002276    JAW14150.1    GDKW01001252    JAI55343.1   

Proteomes

UP000005204    UP000283053    UP000053240    UP000007151    UP000218220    UP000053268    + More
UP000037510    UP000007266    UP000008792    UP000015102    UP000075886    UP000075884    UP000192221    UP000069272    UP000076502    UP000000304    UP000001292    UP000037069    UP000002320    UP000009192    UP000075885    UP000008711    UP000000803    UP000076408    UP000007801    UP000008820    UP000053105    UP000075900    UP000075901    UP000095301    UP000002282    UP000075883    UP000242457    UP000005203    UP000075920    UP000053825    UP000036403    UP000069940    UP000249989    UP000075881    UP000075882    UP000053097    UP000078542    UP000075902    UP000076407    UP000007062    UP000075840    UP000092553    UP000075903    UP000078541    UP000008237    UP000075880    UP000078492    UP000078540    UP000005205    UP000279307    UP000079169    UP000001070    UP000095300    UP000000311    UP000007819    UP000002358    UP000268350    UP000092461    UP000007798    UP000001819    UP000215335    UP000008744    UP000192223    UP000092462    UP000001646   

PRIDE

H9JT09    Q9VEC8   

Pfam

PF00240   ubiquitin        + More
PF17840   Tugs

Interpro

IPR029071   Ubiquitin-like_domsf        + More
IPR000626   Ubiquitin_dom       
IPR019954   Ubiquitin_CS       
IPR019956   Ubiquitin       
IPR041421   Ubl4_C_TUGS       

SUPFAM

SSF54236   SSF54236       

ProteinModelPortal

H9JT09   A0A437BA15   A0A194RBQ7   A0A212EW06   A0A2A4IWA9   A0A2H1V995   + More
A0A194Q8C0   S4PWX6   A0A0L7LFA6   D6WYC0   B4LZ86   T1GBF2   A0A1Q3FAE9   A0A1Y1JWM1   A0A182QF67   A0A182NA82   W8BIM1   A0A1W4UM38   A0A182F8C7   A0A2M4CK31   A0A2M4C364   A0A2M3Z9Q3   A0A2M4ARE9   A0A0K8TP43   A0A154PTR7   B4QV15   B4IBA2   A0A0L0C7B6   B0WA53   B4KCD3   A0A2M4CJ37   A0A0K8URH7   A0A182PA57   B3P0D5   Q9VEC8   A0A411G6P4   A0A182YKI7   B3LYN9   Q17E61   A0A0M9A1W9   A0A182R3N7   A0A034UZ55   A0A0C9QGD6   A0A182T674   A0A023EGE9   A0A0A1XFE1   A0A1I8MN06   B4PL70   A0A182M0F8   A0A1L8EBP9   A0A0T6B7A1   B4IVV0   A0A2A3EG48   V9IIZ3   A0A087ZY80   A0A182VX53   A0A0L7R0J4   A0A0J7L2J9   A0A182GUG6   A0A182K0N2   A0A1C7CZV6   A0A026WD36   A0A151IHK2   A0A182U7S4   A0A182XI99   Q7QC06   A0A182HT86   A0A0M4EM54   A0A182UXV5   A0A151JSN1   E2C9K9   A0A182J7U9   A0A195DSY0   A0A195ATW3   A0A158NPW2   A0A1L8DT39   A0A3L8D8M4   A0A1S4E8Z8   B4JUS9   A0A1I8P7V7   A0A0A9Z5X8   A0A310S988   E1ZZS7   C4WW88   K7J7Z0   A0A3B0JMF5   A0A1B0ETS7   U5EQW3   B4NB52   A0A0K8SYX8   Q293V5   A0A232FHM2   A0A1B6E7Z8   B4GLL0   A0A1W4XR76   A0A1B0D1Y4   T1E394   G1KDH3   A0A224XZT0   A0A0P4VJY9  

PDB

2DZI     E-value=4.13295e-07,     Score=123

KEGG

101743019    K23388 ubiquitin-like protein 4A | (RefSeq) ubiquitin-like protein 4A

GO

GO:0016020   GO:0051087   GO:0005654   GO:0071818   GO:0071816   GO:0005515   GO:0006355   GO:0020037   GO:0051082   GO:0015074   GO:0030429   GO:0004003   GO:0005634   GO:0006289   GO:0016286  

Length:

151

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00058

Exp number, first 60 AAs:

0.00058

Total prob of N-in:

0.27996

outside

1  -  151

 

 

Pi

247.626261

Theta

195.320067

Tajima's D

0.818609

CLR

0.003803

CSRT

0.606919654017299

Interpretation

Uncertain