Silkworm Genome Informatics Database

Gene

KWMTBOMO12857 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012670

Annotation

PREDICTED:_uncharacterized_protein_LOC101744833_[Bombyx_mori]

Location

Bomo_Chr22(+):2301292-2302312 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 1.216

CDS

ATGCTGACCCTCGCGCTCCTTCTCATCGCAGTCAGTGCCGCAAACTCGCGACCTTTCAACATCACGTACCTCATGGTCCCCGAGGTAGTGTGGCCGGGACAGGACGAAGTGGACATCGAGTGCCGCTACGACGCCAACTTCACGATCCTCAACTGGTTCAAAGGCTCCACTGAGTTCTTCAGGTACAAACCGGGCGCCGCGCCGAGTACACGATCGTTTCCAATACTCGGAGTGGGACGGATCCAACTGGTAGCCTGTGGACCTACTGCGTGCAGACTGAAACTAGGTGGTCTCAGTGAGGAAGCCTCAGGATTGTATCGATGTGACATAGAAAGAGATGCTCCGCCTCATTTATTCGAGTCCCGCAAAGCGTATATGCAAGTTCACGGTCACGAACACAGGAAGCCACTGCTCGAAGGTTTGGCTGAGGAATACGCTGAAGGGGAACTGATACAAGCCTATTGTCGTGCCGCTCCCGACTCCGAAATACGTTGGTACATAAACGGACATGAAATGGAAGACACAAGGGGCAAAGCGACCTTGAAAAAAAACAGTTCGAGATTCGATTTCGTAGGTCTCCCTCCGACTATGACGATGCAATGTGCTGAGTTCAGATACGGAAGGCTACTGGGCTCCAAAGAATTCAGTGCACGTTTGAAGGAAGTGGCTCATATCAAAAGGGAAGAGAGAGAGAAAGAAAAATCGAATGGAGTTAGTTTAAAAACTAGTTATTTACGTTTTATAAGTGCTTTATTTATTTTAAACAGTTTACAAGTATTCTGGACTTTTCTATAG

Protein

MLTLALLLIAVSAANSRPFNITYLMVPEVVWPGQDEVDIECRYDANFTILNWFKGSTEFFRYKPGAAPSTRSFPILGVGRIQLVACGPTACRLKLGGLSEEASGLYRCDIERDAPPHLFESRKAYMQVHGHEHRKPLLEGLAEEYAEGELIQAYCRAAPDSEIRWYINGHEMEDTRGKATLKKNSSRFDFVGLPPTMTMQCAEFRYGRLLGSKEFSARLKEVAHIKREEREKEKSNGVSLKTSYLRFISALFILNSLQVFWTFL

Uniprot

H9JT08 A0A194Q7X6 A0A194RG53 A0A212EVX7 A0A2H1V986 A0A2A4JS92 + More
A0A0L7KUJ3 B4N9W8 A0A1B6D566 A0A067RP13

Pubmed

19121390 26354079 22118469 26227816 17994087 24845553 + More

EMBL

BABH01030754 BABH01030755 BABH01030756 KQ459324 KPJ01642.1 KQ460416 + More
KPJ14916.1 AGBW02012108 OWR45621.1 ODYU01001348 SOQ37410.1 NWSH01000671 PCG74905.1 JTDY01005726 KOB66694.1 CH964232 EDW81723.1 GEDC01016464 JAS20834.1 KK852553 KDR21479.1

Proteomes

UP000005204 UP000053268 UP000053240 UP000007151 UP000218220 UP000037510 + More
UP000007798 UP000027135

PRIDE

H9JT08

Pfam

PF05004 IFRD + More
PF04836 IFRD_C

Interpro

IPR006921   Interferon-rel_develop_reg_C        + More
IPR007701   Interferon-rel_develop_reg_N
IPR039777   IFRD
IPR016024   ARM-type_fold
IPR013783   Ig-like_fold
IPR036179   Ig-like_dom_sf
IPR007110   Ig-like_dom
IPR003599   Ig_sub

SUPFAM

SSF48371 SSF48371 + More
SSF48726 SSF48726

Gene 3D

2.60.40.10

ProteinModelPortal

H9JT08 A0A194Q7X6 A0A194RG53 A0A212EVX7 A0A2H1V986 A0A2A4JS92 + More
A0A0L7KUJ3 B4N9W8 A0A1B6D566 A0A067RP13

KEGG

101744833 no KO assigned | (RefSeq) uncharacterized LOC101744833

GO

GO:0016021 GO:0005515 GO:0007165 GO:0020037 GO:0051082 GO:0015074 GO:0030429 GO:0004003 GO:0005634 GO:0006289 GO:0016286

PANTHER

PTHR12354

SignalP

Position: 1 - 16, Likelihood: 0.993276

Length:

264

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.30236

Exp number, first 60 AAs:

0.08041

Total prob of N-in:

0.04916

outside

1 - 264

Pi

213.515731

Theta

195.910824

Tajima's D

0.368987

CLR

0.002794

CSRT

0.476226188690565

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics