Pre Gene Modal
BGIBMGA012714
Annotation
Uncharacterized_protein_OBRU01_15168_[Operophtera_brumata]
Full name
Protein amnionless
Location in the cell
Extracellular   Reliability : 1.895
Sequence
CDS
ATGTACACGAGCACTAGTTTGCTGTTGTTCTCGTCAATTGTCGCTATCGCATCAGCGGCTCTAGTGAAATGGGTGCCAAATGGGAGCTTCAACTTGCCTGCCAACTTCAAAGACAAGAAACTGCCGTGTTCAAAGCAAACTGTTGTGTTTCCTGATAGAATGACAGGGTCAGTGAAAATGCAGTCTGAGGAGAAAGTGAAAGAGCTTGTCTTGCCCGTGGATGGTGAGATTATTCTCGAAACCTTGATAGTTCTCGGTGAGGATCCAACAGAAACGAATTGCACAGAAGGTTACTCGTATTATATGGATCAGTCTATGTCTTCGTGGGCCCAAGCGGGCGTTTGGAGTTCTCTTCGATTCAATGAAGCCACGCCTGATTCTGAGAAGTTGCCCTGTGAAGGTGACGATGTCGAATTCCCGAATGCCAAATACACAGTGATACTGCCGGATTCAATGCAGTCTGTGCGCAGTTTAAAAGTTAGCGGCGAGACCTACACCACCGAGTCGTTTCTAAGCCGAGCTTCGGAATCTGAGGAGGAGCAAGCTTTTCAACTAAACAGCTTATTACAAACAGGAGTTAAAGTTTCTTCAAGGACTTGTCGTCACAAAAATGGTTGTCCGTGCCAGAAGTTTCCTTTGGAAATCGACTGCTCTTTGAAATATTGTCCGCAACCAAGCTGCTTGGCGCCAATCAAGCCGGACGGTTACTGCTGTAAGCAATGCGGAGGATACATTACATTTGAAATTGACGACGACTTCGATATGATAGCCTTCAATGAGCTAGTGGATAAAACTGTTCAGAGCTACGGGGGAAATGTTGTGTATCACATCGGTTTCGCGCCGGTCAAAGATTCTAGGACACTACAGCTTGTTGTTGTGGAAAAAGGAGCGTATACCGGAACTAGTGCTGAAATAGCTAATTATATTGATAAAACTATCGAGAAACATTGGTTTAAGAGTAGCAAGCTGGCGAAGATTAGCGGAAGTCCACTTGACAAAGCAAATTTGGGAGAGAAAATGTTTTTCTCAATGTTCTTTGCGGTCGCTTTAGTAATGGGAGCCATTTACTTATATTACTATAGATTACCTAAAATAGAATTTCCAGTAATAAACAGAGGCTCTAGACGGATGTTCAGCAGATTCCAAAGAAGAACAGACAGCGTGGTGTCGTTGACCCGAAGAGATTCGACCATTATAGGGGGCGGACGAACTGCGTTTAGGAACCCGATGTATGACTCAAGAAGGGGGCGTGTTGAGGTTGCAGAGTCAGTTGTTGAAGAATAA
Protein
MYTSTSLLLFSSIVAIASAALVKWVPNGSFNLPANFKDKKLPCSKQTVVFPDRMTGSVKMQSEEKVKELVLPVDGEIILETLIVLGEDPTETNCTEGYSYYMDQSMSSWAQAGVWSSLRFNEATPDSEKLPCEGDDVEFPNAKYTVILPDSMQSVRSLKVSGETYTTESFLSRASESEEEQAFQLNSLLQTGVKVSSRTCRHKNGCPCQKFPLEIDCSLKYCPQPSCLAPIKPDGYCCKQCGGYITFEIDDDFDMIAFNELVDKTVQSYGGNVVYHIGFAPVKDSRTLQLVVVEKGAYTGTSAEIANYIDKTIEKHWFKSSKLAKISGSPLDKANLGEKMFFSMFFAVALVMGAIYLYYYRLPKIEFPVINRGSRRMFSRFQRRTDSVVSLTRRDSTIIGGGRTAFRNPMYDSRRGRVEVAESVVEE
Summary
Description
Necessary for efficient absorption of vitamin B12 (PubMed:12590260, PubMed:14576052). Required for normal CUBN-mediated protein transport in the kidney. May direct the production of trunk mesoderm during development by modulating a bone morphogenetic protein (BMP) signaling pathway in the underlying visceral endoderm (By similarity).
Necessary for efficient absorption of vitamin B12 (By similarity). Required for normal CUBN-mediated protein transport in the kidney (PubMed:15342463). May direct the production of trunk mesoderm during development by modulating a bone morphogenetic protein (BMP) signaling pathway in the underlying visceral endoderm.
Subunit
Interacts with CUBN/cubilin.
Miscellaneous
The mutations described in PubMed:12590260 all affect the N-terminus of the protein; shorter isoforms produced from alternative transcription start sites might still fulfill a role in embryogenesis. This might explain the discrepancy with the embryonic lethality of null mutants in mice.
Keywords
3D-structure
Alternative promoter usage
Cell membrane
Coated pit
Complete proteome
Developmental protein
Direct protein sequencing
Disease mutation
Endosome
Glycoprotein
Membrane
Protein transport
Reference proteome
Signal
Transmembrane
Transmembrane helix
Transport
Feature
chain Protein amnionless
sequence variant In RH-MGA1; dbSNP:rs119478058.
PDB
6GJE
E-value=1.62208e-22,
Score=262
Ontologies
Topology
Subcellular location
Apical cell membrane
Cell membrane
Endosome
Membrane
Coated pit
SignalP
Position: 1 - 19,
Likelihood: 0.887010
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
36.85846
Exp number, first 60 AAs:
15.41181
Total prob of N-in:
0.73366
POSSIBLE N-term signal
sequence
Population Genetic Test Statistics