Gene

KWMTBOMO12847

Annotation

PREDICTED:_uncharacterized_protein_LOC105841598_[Bombyx_mori]

Location

Bomo_Chr22(-):1558405-1559288      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.234

CDS

ATGTGGACCGATGAGGCCTCTTTCACAAGATCAGGGTATACGAACCACCGCAATGAACATCTGTGGCTTCAAGAAAATCCACATGCAATCCGACCAAGTTCTTTTCAGCACCAATTTTCGGTCAATGTTTGGGCAGGACTGATTAACGATGTACTTGTTGGACCAATCATTTTACCAGAAACAATGAATGGTCCAAGGTTCCTGAATTTCCTGGAAACGGACTCTTTTGATGCTCTATTGGAGTTACCATTGGCCTACAGAAACAGAATGATTCTGCAACTGGATGGTGCTCCCGCACATTTTGCACTACTTGTGCGAAATCATTTAAACGCGCAGTATTCGCCGTGGGTTGGGCGCGGTGGAACAATCTCATGGCCGCCACGCTCGCCTTATTTAACGCCCCTCGATTTTTTTTCTTTGGGGCACAATGAAACAAAAAGTATACGTAAACGTGCCTAA

Protein

MWTDEASFTRSGYTNHRNEHLWLQENPHAIRPSSFQHQFSVNVWAGLINDVLVGPIILPETMNGPRFLNFLETDSFDALLELPLAYRNRMILQLDGAPAHFALLVRNHLNAQYSPWVGRGGTISWPPRSPYLTPLDFFSLGHNETKSIRKRA

Similarity

Belongs to the ligand-gated ion channel (TC 1.A.9) family.

Uniprot

A0A151J3H9   A0A0J7JYC2   A0A151WM25   A0A151XIJ3   A0A026WK61   V5I8G8   + More
A0A1B6L1X4   E1ZWN4   A0A0L7RKL3   A0A026W1J5   V5I8Z5   A0A0J7MPU2   V5G1N2   A0A0L7QRJ9   A0A026WEJ2   A0A026WPY6   A0A026VXV6   A0A026VWZ5   V5GHN4   A0A026WUR9   A0A026X2I4   A0A026X1M1   A0A026W119   V5GH39   A0A026X2K1   A0A1B6FLB6   V5FZP0   A0A1B6I4I3   V5GNW2   A0A0L7QJP3   A0A026W3T8   A0A1B6L5Q6   V5GGM1   V5G014   A0A1B6GQ45   A0A0J7K067   V5GJU4   A0A151X0B6   A0A026WVL0   A0A1B6FJI1   A0A026W930   A0A026WJ57   A0A1B6GAU5   S4NMV3   A0A0J7K1X0   V5GSG2   A0A0J7JXF8   A0A195CWZ1   A0A026VVT5   A0A151WNW0   V5GV20   A0A026WTI9   V5I843   A0A2L2YME0   V5GNH3   A0A1B6EHF5   V5I875   A0A151WWY7   A0A3L8D6R5   A0A2J7PPH7   V5G091   V5GHS2   A0A1B6IH16   A0A2P8XDY9   A0A026X080   A0A3L8DLH8   A0A2P8YQC2   J9KWH6   A0A1B6J131   A0A1B6JLU6   A0A3Q0IZ19   A0A3L8E598   E2AJG5   A0A3L8DEV0   A0A3L8DF83   A0A3L8DN64   A0A3L8DSK2   A0A0J7K2A0   J9KP67   A0A3L8D890   A0A3L8DY44   A0A2J7PCV1   A0A2S2P0U3   A0A087TCY5   X1XRQ4   A0A3L8DZM0   V5GT14   A0A151XG73   A0A3L8DZ31   A0A3L8D708   A0A2P8XIM8   A0A026W7L7   A0A0J7K4W5   A0A026VSU0   A0A2H8TTM5   X1X395   A0A2A4JFB1   A0A3L8DET6   A0A3L8DXB7   E2C8A7  

Pubmed

24508170    20798317    23622113    26561354    30249741    29403074    + More

EMBL

KQ980300    KYN16815.1    LBMM01020929    KMQ83178.1    KQ982944    KYQ48867.1    + More
KQ982080    KYQ60233.1    KK107180    EZA56036.1    GALX01004710    JAB63756.1    GEBQ01022433    JAT17544.1    GL434867    EFN74406.1    KQ414571    KOC71338.1    KK107488    EZA49893.1    GALX01003825    JAB64641.1    LBMM01024364    KMQ82585.1    GALX01004551    JAB63915.1    KQ414776    KOC61252.1    KK107244    EZA54515.1    KK107152    EZA57144.1    KK107597    EZA48613.1    KK107871    EZA47379.1    GALX01004937    JAB63529.1    KK107097    EZA59708.1    KK107024    EZA62288.1    KK107029    EZA62157.1    KK107502    EZA49708.1    GALX01005142    JAB63324.1    KK107022    EZA62313.1    GECZ01018976    JAS50793.1    GALX01005306    JAB63160.1    GECU01025860    JAS81846.1    GALX01005174    JAB63292.1    KQ415061    KOC58833.1    KK107501    EZA49709.1    GEBQ01020929    JAT19048.1    GALX01005342    JAB63124.1    GALX01005176    JAB63290.1    GECZ01005240    JAS64529.1    LBMM01019395    KMQ83546.1    GALX01004102    JAB64364.1    KQ982625    KYQ53468.1    EZA59696.1    GECZ01019428    JAS50341.1    KK107381    EZA51539.1    KK107175    EZA56077.1    GECZ01010211    JAS59558.1    GAIX01014211    JAA78349.1    LBMM01016382    KMQ84443.1    GALX01005288    JAB63178.1    LBMM01024527    KMQ82561.1    KQ977185    KYN05077.1    KK107763    EZA47877.1    KQ982905    KYQ49510.1    GALX01004388    JAB64078.1    KK107108    EZA59380.1    GALX01005335    JAB63131.1    IAAA01030261    LAA09291.1    GALX01005334    JAB63132.1    GECZ01032429    JAS37340.1    GALX01005175    JAB63291.1    KQ982691    KYQ52181.1    QOIP01000012    RLU16120.1    NEVH01022661    PNF18242.1    GALX01005081    JAB63385.1    GALX01004887    JAB63579.1    GECU01021500    JAS86206.1    PYGN01002619    PSN30184.1    KK107050    EZA61662.1    QOIP01000006    RLU21290.1    PYGN01000434    PSN46441.1    ABLF02008598    ABLF02008602    GECU01014834    JAS92872.1    GECU01007460    JAT00247.1    QOIP01000001    RLU27329.1    GL439989    EFN66426.1    QOIP01000009    RLU18851.1    RLU18852.1    RLU21880.1    QOIP01000004    RLU23397.1    RLU23947.1    LBMM01016434    KMQ84424.1    ABLF02012757    QOIP01000011    RLU16496.1    QOIP01000003    RLU25143.1    NEVH01026403    PNF14165.1    GGMR01009937    MBY22556.1    KK114639    KFM62974.1    ABLF02024886    ABLF02024890    ABLF02057229    QOIP01000002    RLU25796.1    GALX01005078    JAB63388.1    KQ982173    KYQ59383.1    RLU25697.1    RLU16054.1    PYGN01002003    PSN31861.1    KK107356    EZA52050.1    LBMM01014089    KMQ85334.1    KK108454    EZA46705.1    GFXV01005752    MBW17557.1    ABLF02021999    NWSH01001744    PCG70264.1    RLU18806.1    RLU25091.1    RLU25271.1    GL453598    EFN75823.1   

Proteomes

UP000078492    UP000036403    UP000075809    UP000053097    UP000000311    UP000053825    + More
UP000078542    UP000279307    UP000235965    UP000245037    UP000007819    UP000079169    UP000054359    UP000218220    UP000008237   

Pfam

PF13358   DDE_3        + More
PF16087   DUF4817
PF01498   HTH_Tnp_Tc3_2
PF07782   DC_STAMP
PF13843   DDE_Tnp_1_7
PF02931   Neur_chan_LBD

Interpro

IPR038717   Tc1-like_DDE_dom        + More
IPR032135   DUF4817       
IPR002492   Transposase_Tc1-like       
IPR009057   Homeobox-like_sf       
IPR012858   DC_STAMP-like       
IPR029526   PGBD       
IPR006202   Neur_chan_lig-bd       
IPR036734   Neur_chan_lig-bd_sf       
IPR036719   Neuro-gated_channel_TM_sf       

SUPFAM

SSF46689   SSF46689        + More
SSF90112   SSF90112       
SSF63712   SSF63712       

Gene 3D

2.70.170.10    

ProteinModelPortal

A0A151J3H9   A0A0J7JYC2   A0A151WM25   A0A151XIJ3   A0A026WK61   V5I8G8   + More
A0A1B6L1X4   E1ZWN4   A0A0L7RKL3   A0A026W1J5   V5I8Z5   A0A0J7MPU2   V5G1N2   A0A0L7QRJ9   A0A026WEJ2   A0A026WPY6   A0A026VXV6   A0A026VWZ5   V5GHN4   A0A026WUR9   A0A026X2I4   A0A026X1M1   A0A026W119   V5GH39   A0A026X2K1   A0A1B6FLB6   V5FZP0   A0A1B6I4I3   V5GNW2   A0A0L7QJP3   A0A026W3T8   A0A1B6L5Q6   V5GGM1   V5G014   A0A1B6GQ45   A0A0J7K067   V5GJU4   A0A151X0B6   A0A026WVL0   A0A1B6FJI1   A0A026W930   A0A026WJ57   A0A1B6GAU5   S4NMV3   A0A0J7K1X0   V5GSG2   A0A0J7JXF8   A0A195CWZ1   A0A026VVT5   A0A151WNW0   V5GV20   A0A026WTI9   V5I843   A0A2L2YME0   V5GNH3   A0A1B6EHF5   V5I875   A0A151WWY7   A0A3L8D6R5   A0A2J7PPH7   V5G091   V5GHS2   A0A1B6IH16   A0A2P8XDY9   A0A026X080   A0A3L8DLH8   A0A2P8YQC2   J9KWH6   A0A1B6J131   A0A1B6JLU6   A0A3Q0IZ19   A0A3L8E598   E2AJG5   A0A3L8DEV0   A0A3L8DF83   A0A3L8DN64   A0A3L8DSK2   A0A0J7K2A0   J9KP67   A0A3L8D890   A0A3L8DY44   A0A2J7PCV1   A0A2S2P0U3   A0A087TCY5   X1XRQ4   A0A3L8DZM0   V5GT14   A0A151XG73   A0A3L8DZ31   A0A3L8D708   A0A2P8XIM8   A0A026W7L7   A0A0J7K4W5   A0A026VSU0   A0A2H8TTM5   X1X395   A0A2A4JFB1   A0A3L8DET6   A0A3L8DXB7   E2C8A7  

KEGG

105841598    no KO assigned | (RefSeq) uncharacterized LOC105841598

GO

GO:0006313   GO:0003677   GO:0015074   GO:0016021   GO:0004888   GO:0005230  

Length:

152

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.87645

Exp number, first 60 AAs:

1.81257

Total prob of N-in:

0.43226

outside

1  -  152

 

 

Pi

174.038072

Theta

37.536347

Tajima's D

2.56553

CLR

1.32765

CSRT

0.950352482375881

Interpretation

Uncertain