SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12845
Pre Gene Modal
BGIBMGA012718
Annotation
triose-phosphate_transporter-like_protein_[Bombyx_mori]
Full name
Solute carrier family 35 member E1 homolog      
Location in the cell
PlasmaMembrane   Reliability : 3.48
 

Sequence

CDS
ATGGGTACAAGCGGCTCCAGGCGCGAGACACTAATAGTTGGCTTCCTGTGCGCAGCGTGGTATATGTTAAGTTCAGCCAGTAATGTCGTGGGCAAACTGGCATTAACAGAGCTACCATTTCCACTAACTATGACAGCGGTACAGCTGTGTGCAGCGGCCTCGCTGAGTGTACCCGCGCTAGCCCTGTGTGGAGTACGTTCGACGCGATGGCCGACGAACTATTGGACCCGTGTCTTAGTACCCTTGGCGATCGCCAAACTTCTTACCACACTGTGCTCGCAAGTTTCCATTTGGAAAGTGCCAGTCTCCTATGCCCACACAGTGAAAGCGACGACTCCTCTCTGGACGGCGGGGCTGGCTCGCGTACTGTTTGGGGAGCGCGTGTCTCGCGGCGTGGCGGGCGCGCTGCTCGTGATCGCGGGCGGGGTCGCGCTCGCCTCGCTCACCGAGCTGCAGTTCGATGCGCTGGGGCTGGGAGCCGCGCTCACGTCCGCCGCGCTGTTGGCGCTGCAGCATCTGTATTCGAAGCGCGCGCTGCAGGACTCCGGCGTGCACCACTTGCGACTGCTGGCGACGTTGTCGGGTCTGGCGCTGGTGCCGATGGCTCCGTTGTGGTTGGTGCGGGACGCCGGCGCCGTACTGCGCGCCCAGGTGGCGTGGAACCGCGCGGGCCCGCTGCTGCTGGCGGACGGGGTGCTGGCGTGGCTGCAGGCGGTGGCTGCGTTCTCGGTGTTGTCGCGAGTGTCGCCGCTGACGTACTCAGTGGCGTCGGCTGCGAAGCGCGCCGTGGTGGTGGGCGCGTCGCTGGTGGTGCTGAGGAACCCGGCGCCGCCGCTGAACGTGGTGGGCATGTCGGTGGCAGTGCTGGGTGTGCTGGCTTATGACCGAGCCCGAGCGGCCGCCCGCCGCGCCCCCCGCCCCGCGCTGCCAGTCTGA
Protein
MGTSGSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQLCAAASLSVPALALCGVRSTRWPTNYWTRVLVPLAIAKLLTTLCSQVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVSRGVAGALLVIAGGVALASLTELQFDALGLGAALTSAALLALQHLYSKRALQDSGVHHLRLLATLSGLALVPMAPLWLVRDAGAVLRAQVAWNRAGPLLLADGVLAWLQAVAAFSVLSRVSPLTYSVASAAKRAVVVGASLVVLRNPAPPLNVVGMSVAVLGVLAYDRARAAARRAPRPALPV

Summary

Description
Putative transporter.
Similarity
Belongs to the TPT transporter family. SLC35E subfamily.
Keywords
Complete proteome   Membrane   Reference proteome   Transmembrane   Transmembrane helix  
Feature
chain  Solute carrier family 35 member E1 homolog
EMBL
BABH01034908    HM026603    ADG85767.1    KQ459324    KPJ01680.1    RSAL01000015    + More
RVE53073.1    AGBW02008428    OWR53423.1    KQ435090    KZC14561.1    KQ435718    KOX78983.1    KZ288266    PBC30187.1    PYGN01000958    PSN38915.1    GL447283    EFN86611.1    KB632318    ERL92266.1    APGK01017166    APGK01017167    KB739998    ENN81931.1    DS231864    EDS40231.1    GEZM01031310    JAV84941.1    LJIG01016018    KRT81860.1    CH933810    EDW06918.2    GFDL01011249    JAV23796.1    GFDL01011250    JAV23795.1    GFDL01011203    JAV23842.1    KQ978350    KYM94700.1    QOIP01000002    RLU26145.1    CH916376    EDV95193.1    GANO01000483    JAB59388.1    ATLV01017829    KE525195    KFB42503.1    CH940651    EDW65254.1    KQ981148    KYN09089.1    GECU01017838    JAS89868.1    KK107069    EZA60738.1    GEBQ01026020    JAT13957.1    GL888363    EGI62162.1    APCN01001132    AAAB01008846    ADTU01002501    GECZ01031337    JAS38432.1    CH480870    EDW53788.1    AE014298    AHN59992.1    AHN59993.1    BT003539    KQ982617    KYQ53806.1    CH954180    EDV47647.1    CH963925    EDW78240.1    EAA06186.4    CP012528    ALC49466.1    CM000162    EDX03125.1    KRK07128.1    CH379063    EAL32350.2    CH479205    EDW30833.1    KQ976715    KYM76908.1    AXCN02001240    GAPW01002045    JAC11553.1    CH902622    EDV34490.1    OUUW01000003    SPP77834.1    JXUM01131221    KQ567682    KXJ69321.1    KQ981695    KYN37540.1    GDHF01017416    GDHF01008419    JAI34898.1    JAI43895.1    GFTR01005276    JAW11150.1    CVRI01000014    CRK89762.1    CCAG010015200    GBXI01016902    JAC97389.1    ADMH02001819    ETN61019.1    GAKP01016939    JAC42013.1    QCYY01001330    ROT78803.1    GGFM01002872    MBW23623.1    GDKW01002575    JAI54020.1    ACPB03021330    KK852523    KDR22076.1    AJWK01012538    JRES01000781    KNC28365.1    KK854133    PTY11852.1    GFDF01009537    JAV04547.1    GDIQ01027368    JAN67369.1    GDIQ01228062    GDIP01090063    JAK23663.1    JAM13652.1    KQ971372    EFA09770.1    GGFJ01005109    MBW54250.1    GGFJ01005108    MBW54249.1    GBHO01021605    GBRD01012632    JAG21999.1    JAG53192.1    GGFJ01005107    MBW54248.1    GL437526    EFN70320.1    KQ414756    KOC61621.1    GDHC01020162    JAP98466.1    GDHF01004454    JAI47860.1    GDIQ01142845    JAL08881.1   
Pfam
PF03151   TPT
Interpro
IPR004853   Sugar_P_trans_dom       
PDB
5Y79     E-value=0.000944305,     Score=99

Ontologies

Topology

Subcellular location
Membrane  
Length:
311
Number of predicted TMHs:
8
Exp number of AAs in TMHs:
162.87889
Exp number, first 60 AAs:
37.88398
Total prob of N-in:
0.98916
POSSIBLE N-term signal
sequence
inside
1  -  11
TMhelix
12  -  34
outside
35  -  43
TMhelix
44  -  66
inside
67  -  78
TMhelix
79  -  98
outside
99  -  130
TMhelix
131  -  148
inside
149  -  154
TMhelix
155  -  174
outside
175  -  183
TMhelix
184  -  206
inside
207  -  217
TMhelix
218  -  240
outside
241  -  274
TMhelix
275  -  294
inside
295  -  311
 
 

Population Genetic Test Statistics

Pi
224.426852
Theta
180.430378
Tajima's D
0.92677
CLR
0
CSRT
0.642617869106545
Interpretation
Uncertain
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