Gene

KWMTBOMO12836

Pre Gene Modal

BGIBMGA012748

Annotation

PREDICTED:_lachesin_[Bombyx_mori]

Location

Bomo_Chr22(+):1071121-1162018      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.865

CDS

ATGGTCGAGCCTGATGCGAGCATGGCGTGGAGACGGGGGCCCTGCAAAAGCTTCGCCATCAGCGTCATACAGATCATCACTATTATATGTCAAGTGTTAACAGAGGAGCCTCGGTTTGCTGAGCCCATCCCTAACGTGACCGTGGCTCTGGGCCGAGATGCCAGCCTCCCGTGTGTCGTGGAACATCTCGGGACCTATAAGGTCGCCTGGATCCACATCGACCGCCAGATGATCCTGACCATCCATCGTCATGTCATCACTCGCCTGGCCCGGTTCAGCGTGTCGCATGACAACGCCATGACCTGGCTGCTCCACGTCAGCCAGGTCCAGCAAGAAGACAGAGGATATTACATGTGCCAAGTGAACACCAACCCTATGATCAGCCAAGTCGGATACCTTCAGGTTGTAGTTCCTCCAAATATCCTGGACGAAAAAAGTACGCAGTCAGCTGTTGCGGTGAGAGAAAACCAGAACATCAGCTTGGTGTGCAAGGCTGATGGATTTCCTACGCCCAAGATCATGTGGCGACGGGAGGACGGACAACCGATATCTGTGGACAGAAGGAAGAAAGTGACAGTGTACGAAGGTGAAATGCTGAATCTTCAACGCATAAGTCGCACGGAAATGGGCGCGTACCTCTGCATTGCTACCAACGCTGTGCCTCCGTCTGTCTCCAAGAGGATTATTGTGGACGTTGAGTTTTCACCCATGATCTGGGTACCGAATCAACTAGTGGGTGCTCCGGCCGGCACCGACGTGACGGTGGATTGCCACACGGAGGCCCACCCCCGCGCCATCTCCTACTGGGTCTATGATAACGTAATGGTACTTCCGACTAAGAAGTACGCGATCAATACTGAAGAAAATTCGTACAGGGCCCACATGAAGCTAACAGTGCGGAGTCTGCAGCTCGGCGACTTTGGCAACTACAGGTGCATATCGAAGAACTCATTAGGAGAGACTGAAGGTTCTATAAGGCTGTACGAAATTCCTATGCCATCGTCTTCACCAAAAGCCACAGAAATGAAGAGCAATGCCAACAAAGAAAGTCCGCGGCGTGTAAACGCGAGCCGGTCGGTCCCCCGCGCGGACTCGAACACGGAGCGGCCGAGCGTGGTCCGCGCGCAGCTCGACCGCTCGCCGGAGCGCGACGCCGCCCAGCACGTGTACCGCCCGCCGCACACGCACCACGTCTCAGGAACGAAAGCAGTGCATTGTTGGAGACCTTCAGTATTAGCTTTTTTTGTCTTATTTCAAATGGATTTTGTAGCCGATTTTTTTTGA

Protein

MVEPDASMAWRRGPCKSFAISVIQIITIICQVLTEEPRFAEPIPNVTVALGRDASLPCVVEHLGTYKVAWIHIDRQMILTIHRHVITRLARFSVSHDNAMTWLLHVSQVQQEDRGYYMCQVNTNPMISQVGYLQVVVPPNILDEKSTQSAVAVRENQNISLVCKADGFPTPKIMWRREDGQPISVDRRKKVTVYEGEMLNLQRISRTEMGAYLCIATNAVPPSVSKRIIVDVEFSPMIWVPNQLVGAPAGTDVTVDCHTEAHPRAISYWVYDNVMVLPTKKYAINTEENSYRAHMKLTVRSLQLGDFGNYRCISKNSLGETEGSIRLYEIPMPSSSPKATEMKSNANKESPRRVNASRSVPRADSNTERPSVVRAQLDRSPERDAAQHVYRPPHTHHVSGTKAVHCWRPSVLAFFVLFQMDFVADFF

Uniprot

A0A2W1BNC4   A0A2A4JWV6   A0A212F4T6   A0A0N0PCF9   A0A194Q814   D6W6G4   + More
A0A0T6AXE6   A0A1B6KD26   A0A1J1HGP7   E0VR02   A0A182IJ74   A0A084WCV3   A0A182V3N6   A0A182HQH7   A0A182LDV7   Q7Q807   A0A182YKP7   A0A2M4DQC5   A0A182PWI3   W5J9W3   A0A182QHC1   A0A1I8Q0H9   W8BUY3   A0A1A9Y9P1   A0A1B0C2D3   A0A023F435   A0A1S4G204   A0A224XMS5   A0A182N218   Q16GM1   A0A182FEP8   Q17KA9   A0A0M4EYB4   A0A088ANS3   B4LBD0   B4KVC0   A0A0M4EJH0   A0A182H8J8   A0A0R3P4G9   B5DPC0   A0A3B0J9A5   A0A1W4VSI4   A0A0Q9WZ38   A0A0P9C470   A0A0Q5UIC3   A0A0J9RP80   A8JNC7   A0A0R1DZ80   A0A232FI53   A0A182WLY4   K7IX25   A0A0Q5UIF2   A0A0R1E0W0   A0A158P138   A0A1B0A2E6   A0A1B0CCX4   Q1RKT2   A0A2S2QN20   J9KD52   A0A2S2NXN2   A0A1A9X2X6   A0A0L0CBW8   A0A336MB36   A0A336LSY5   A0A1W4WQ57   X1WJ58   C4WUZ3   A0A2H8TNY1   A0A2S2Q8N6   A0A151XK58   A0A2S2NQW2   T1IJH4   T1IZV8   T1IWH8   A0A1Y1KSH7   A0A1B6JAN5   A0A1B6H1T5   A0A1B6MB79   E9FUV1   T1DFY0   A0A1B6ENA4   D6W8U0   A0A139WMQ5  

Pubmed

28756777    22118469    26354079    18362917    19820115    20566863    + More
24438588    20966253    12364791    14747013    17210077    25244985    20920257    23761445    24495485    25474469    17510324    17994087    26483478    15632085    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    28648823    20075255    21347285    26108605    28004739    21292972   

EMBL

KZ149953    PZC76562.1    NWSH01000472    PCG76188.1    AGBW02010320    OWR48733.1    + More
KQ460557    KPJ13964.1    KQ459324    KPJ01663.1    KQ971307    EFA11064.2    LJIG01022641    KRT79486.1    GEBQ01030625    JAT09352.1    CVRI01000004    CRK87173.1    DS235442    EEB15808.1    ATLV01022886    ATLV01022887    KE525337    KFB48047.1    APCN01004610    AAAB01008948    EAA10490.4    GGFL01015575    MBW79753.1    ADMH02001733    ETN61252.1    AXCN02002351    GAMC01003568    JAC02988.1    JXJN01024493    JXJN01024494    GBBI01002491    JAC16221.1    GFTR01005298    JAW11128.1    CH478262    EAT33391.1    CH477227    EAT47076.1    CP012525    ALC43132.1    CH940647    EDW69718.2    CH933809    EDW18363.2    ALC43135.1    JXUM01029178    JXUM01029179    JXUM01029180    JXUM01029181    KQ560844    KXJ80649.1    CH379069    KRT08056.1    EDY73659.2    OUUW01000002    SPP76923.1    CH963847    KRF97676.1    CH902618    KPU78517.1    CH954178    KQS43638.1    CM002912    KMY97736.1    AE014296    ABW08467.2    AGB94136.1    CM000159    KRK01235.1    NNAY01000161    OXU30426.1    AAZX01006816    KQS43639.1    KRK01234.1    ADTU01005502    ADTU01005503    ADTU01005504    ADTU01005505    ADTU01005506    ADTU01005507    ADTU01005508    ADTU01005509    ADTU01005510    ADTU01005511    AJWK01007166    AJWK01007167    AJWK01007168    BT025128    ABE73299.1    GGMS01009870    MBY79073.1    ABLF02036987    ABLF02036989    ABLF02036990    ABLF02036993    ABLF02036998    ABLF02036999    ABLF02037001    ABLF02037004    ABLF02037006    GGMR01009203    MBY21822.1    JRES01000611    KNC29888.1    UFQT01000683    SSX26541.1    UFQS01000164    UFQT01000164    SSX00660.1    SSX21040.1    ABLF02030099    ABLF02040408    ABLF02040411    ABLF02040429    ABLF02040437    ABLF02040440    AK341286    BAH71713.1    GFXV01003826    MBW15631.1    GGMS01004788    MBY73991.1    KQ982036    KYQ60802.1    GGMR01006925    MBY19544.1    JH430290    JH431728    JH431617    GEZM01074983    JAV64359.1    GECU01011462    JAS96244.1    GECZ01001126    JAS68643.1    GEBQ01006795    JAT33182.1    GL732525    EFX88857.1    GAKT01000086    JAA92976.1    GECZ01030393    JAS39376.1    KQ971312    EEZ98398.2    KYB29127.1   

Proteomes

UP000218220    UP000007151    UP000053240    UP000053268    UP000007266    UP000183832    + More
UP000009046    UP000075880    UP000030765    UP000075903    UP000075840    UP000075882    UP000007062    UP000076408    UP000075885    UP000000673    UP000075886    UP000095300    UP000092443    UP000092460    UP000075884    UP000008820    UP000069272    UP000092553    UP000005203    UP000008792    UP000009192    UP000069940    UP000249989    UP000001819    UP000268350    UP000192221    UP000007798    UP000007801    UP000008711    UP000000803    UP000002282    UP000215335    UP000075920    UP000002358    UP000005205    UP000092445    UP000092461    UP000007819    UP000091820    UP000037069    UP000192223    UP000075809    UP000000305   

PRIDE

Q1RKT2   

Pfam

PF07679   I-set        + More
PF07686   V-set

Interpro

IPR013098   Ig_I-set        + More
IPR013783   Ig-like_fold       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR013106   Ig_V-set       
IPR001878   Znf_CCHC       

SUPFAM

SSF48726   SSF48726       

Gene 3D

2.60.40.10    

ProteinModelPortal

A0A2W1BNC4   A0A2A4JWV6   A0A212F4T6   A0A0N0PCF9   A0A194Q814   D6W6G4   + More
A0A0T6AXE6   A0A1B6KD26   A0A1J1HGP7   E0VR02   A0A182IJ74   A0A084WCV3   A0A182V3N6   A0A182HQH7   A0A182LDV7   Q7Q807   A0A182YKP7   A0A2M4DQC5   A0A182PWI3   W5J9W3   A0A182QHC1   A0A1I8Q0H9   W8BUY3   A0A1A9Y9P1   A0A1B0C2D3   A0A023F435   A0A1S4G204   A0A224XMS5   A0A182N218   Q16GM1   A0A182FEP8   Q17KA9   A0A0M4EYB4   A0A088ANS3   B4LBD0   B4KVC0   A0A0M4EJH0   A0A182H8J8   A0A0R3P4G9   B5DPC0   A0A3B0J9A5   A0A1W4VSI4   A0A0Q9WZ38   A0A0P9C470   A0A0Q5UIC3   A0A0J9RP80   A8JNC7   A0A0R1DZ80   A0A232FI53   A0A182WLY4   K7IX25   A0A0Q5UIF2   A0A0R1E0W0   A0A158P138   A0A1B0A2E6   A0A1B0CCX4   Q1RKT2   A0A2S2QN20   J9KD52   A0A2S2NXN2   A0A1A9X2X6   A0A0L0CBW8   A0A336MB36   A0A336LSY5   A0A1W4WQ57   X1WJ58   C4WUZ3   A0A2H8TNY1   A0A2S2Q8N6   A0A151XK58   A0A2S2NQW2   T1IJH4   T1IZV8   T1IWH8   A0A1Y1KSH7   A0A1B6JAN5   A0A1B6H1T5   A0A1B6MB79   E9FUV1   T1DFY0   A0A1B6ENA4   D6W8U0   A0A139WMQ5  

PDB

6EG1     E-value=7.575e-88,     Score=826

KEGG

101744934    no KO assigned | (RefSeq) lachesin

GO

GO:0016021   GO:0050808   GO:0005887   GO:0008270   GO:0003676   GO:0005515   GO:0006508   GO:0015074   GO:0030429   GO:0004003   GO:0005634   GO:0006289   GO:0016286  

Length:

427

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.70558

Exp number, first 60 AAs:

1.66218

Total prob of N-in:

0.08342

outside

1  -  427

 

 

Pi

228.186241

Theta

178.601063

Tajima's D

0.561017

CLR

0.345097

CSRT

0.536773161341933

Interpretation

Uncertain