SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12834
Annotation
Uncharacterized_protein_OBRU01_15893_[Operophtera_brumata]
Location in the cell
Extracellular   Reliability : 1.832
 

Sequence

CDS
ATGACATCTTTCAAGTTGATATCTTGTGCGGTATTATTATTAGTTTTGACTATAATTTCGGCAACGGATTTACAAGTCGGTGTTAGCGTAAATAATGAGTTGGCGTACGTCAAAAATGTAAATAGAAACGCGGTGCCTCTAAAAGTTCGCACTAAGAATGTTTTTTACAGTCGGAATGACACAAGAGTGATACGGGGCATATCAGCAATAGACCTGGACGCCGGTAACGCTAAGCCCACGATTACATCCGGAGGCGTTGGTTTCAGTTTTACGAACATCAAAATCAAAAGTGAACGCGGTGAAGGGCTCAACTATCAAGTGCAAATATTTATTTAA
Protein
MTSFKLISCAVLLLVLTIISATDLQVGVSVNNELAYVKNVNRNAVPLKVRTKNVFYSRNDTRVIRGISAIDLDAGNAKPTITSGGVGFSFTNIKIKSERGEGLNYQVQIFI

Summary

EMBL
JTDY01002960    KOB70409.1    RSAL01000334    RVE42473.1    JQ619215    AFH57153.1    + More
ODYU01000023    SOQ34093.1    KZ149953    PZC76563.1    KQ460416    KPJ14935.1    KQ459324    KPJ01662.1    JQ660354    AFH57171.1    ODYU01004898    SOQ45248.1    AGBW02014390    OWR41766.1    GDQN01007818    GDQN01000344    JAT83236.1    JAT90710.1    JQ619214    AFH57152.1    RSAL01000239    RVE43687.1    KQ460845    KPJ12085.1    AK401791    BAM18413.1    AB499730    BAH57948.1    AK401495    KQ459603    BAM18117.1    KPI92700.1    ODYU01007904    SOQ51090.1    KPJ12004.1    NWSH01000473    PCG76158.1    GAIX01009070    JAA83490.1    JQ619213    AFH57151.1    JTDY01000603    KOB76496.1    AK401546    KQ459592    BAM18168.1    KPI96788.1    NWSH01002920    PCG67302.1    RSAL01000019    RVE52692.1    GAIX01000356    JAA92204.1    AGBW02010320    OWR48732.1    GDQN01003582    JAT87472.1    JTDY01006411    KOB66034.1    RSAL01000011    RVE53567.1    KZ149912    PZC78068.1    ODYU01004645    SOQ44744.1    BABH01009446    BABH01009447    BABH01009448    KQ459896    KPJ19461.1    KQ459583    KPI98676.1    KQ459593    KPI96711.1    RSAL01000010    RVE53781.1    JTDY01002436    KOB71425.1    KQ459249    KPJ02447.1    BABH01031461    BABH01031462    AGBW02014560    OWR41426.1    OWR41429.1    KPJ19465.1    ODYU01010243    SOQ55221.1    KQ460940    KPJ10619.1    NWSH01001063    PCG72838.1    KZ149899    PZC78604.1    GAIX01007178    JAA85382.1    GDQN01002024    JAT89030.1    KQ459992    KPJ18592.1    GAIX01006931    JAA85629.1    ODYU01008370    SOQ51899.1    KQ459166    KPJ03563.1    ODYU01008860    SOQ52824.1    AGBW02012289    OWR45279.1    PZC78609.1    NWSH01000152    PCG78998.1    ODYU01011908    SOQ57917.1    ODYU01003537    SOQ42442.1    ODYU01006834    SOQ49044.1    BABH01006584    BABH01044987    JQ619216    AFH57154.1    KZ149959    PZC76392.1    NWSH01004350    PCG65192.1    AB012298    BAA34219.1    GBRD01011274    JAG54550.1    AGBW02012353    OWR45174.1    PZC78605.1    ODYU01003892    SOQ43216.1    BABH01006586    NWSH01005557    PCG64129.1    RSAL01000006    RVE54240.1    NWSH01001065    PCG72834.1    GDQN01001318    JAT89736.1    JTDY01003071    KOB70201.1    AB012297    BAA34401.1    SOQ43214.1    AGBW02009001    OWR51885.1    BABH01025365    CH933808    EDW09750.1    KA648977    AFP63606.1    CVRI01000055    CRL01463.1    GQ338156    ACT79296.1   
Pfam
PF15868   MBF2
Interpro
IPR031734   MBF2       

Ontologies

Topology

SignalP
Position:   1 - 21,         Likelihood:  0.972588
 
 
Length:
111
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
16.87697
Exp number, first 60 AAs:
16.85237
Total prob of N-in:
0.61823
POSSIBLE N-term signal
sequence
outside
1  -  111
 
 

Population Genetic Test Statistics

Pi
144.970107
Theta
164.027892
Tajima's D
-0.291204
CLR
0
CSRT
0.299435028248588
Interpretation
Uncertain
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