Gene

KWMTBOMO12831

Pre Gene Modal

BGIBMGA012730

Annotation

neuropeptide_receptor_A12_[Bombyx_mori]

Location

Bomo_Chr22(-):883122-895209      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.727

CDS

ATGACAGTTCTTAGGATGGAGGCACAGCTCTTCAAGAAGGCTGGTTGTGTCACAGATATATTCCTGGTGAATCTGTCGGCGGCAGACCTACTCGTGACTGGCATTTGTATGCCGATCCAACTGAGCAAGGCCATTACCCTCGTTTGGTTCTACGGAGAGACTGTTTGCAAGATTGTTAATTACATTCAAGGCGTGGCTGTGGCGGCTAGCGTGTTCACGATCTCTGCGATGTCAGTGGACCGTTGGTTGTCCATTACTCCAGAACCTCGTCTTCGGCCACCAGGCAGGAAGCAGGCGACGCTGCTCCTCATGCTACTTTGGATCGCTGCACTGCTTATCTTCATTCCAACCTCTCTAGTAGCAGGAGTGCGGAAGGAAACCATTCCTATAATATCCAAAGGAGATAAGAACATTTCAATAGAAACCAGAGATATCCATTTCTGCATTGAGGAATGGCCTTCACCGGAGACCAGGAAGCAGTATGGAATGTTCAGTTTCACTCTAGTCTACGCAATACCAGGTCAGAATTAA

Protein

MTVLRMEAQLFKKAGCVTDIFLVNLSAADLLVTGICMPIQLSKAITLVWFYGETVCKIVNYIQGVAVAASVFTISAMSVDRWLSITPEPRLRPPGRKQATLLLMLLWIAALLIFIPTSLVAGVRKETIPIISKGDKNISIETRDIHFCIEEWPSPETRKQYGMFSFTLVYAIPGQN

Similarity

Belongs to the G-protein coupled receptor 1 family.

Uniprot

B3XXM5   A0A2H1VED4   A0A0S1YDB4   A0A2A4J221   A0A194RBD9   A0A212EH34   + More
A0A2W1BZI0   A0A194Q809   A0A212FL87   A0A194QDW6   A0A437B4D2   B3XXP8   A0A2W1BT88   A0A0S1YD95   A0A1B6CDE5   A0A2H8TQ41   J9LMX5   A0A2S2NN60   A0A2S2QWP3   A0A087ZYM9   A0A2A3EGD0   A0A226EKJ1   V4ALY3   V4ASX2   A0A0M8ZPP4   A0A1W4XAT5   A0A1W4WZW7   A0A154PQW2   A0A1W4WZV7   A0A1Y1NH52   A0A3L8D745   A0A232FB03   A0A0N8BH82   A0A0K0PUJ7   A0A0K0PUI1   V4ALZ8   A0A210QBI3   E2BMY8   A0A452THC1   A0A3Q7XS02   A0A0P6DPN9   A0A0N8DJF0   X1Z504   A0A3Q7QAK7   A0A2U3YAH7   A0A2Y9I1X3   A0A310SGA3   D2I5D3   A0A2Y9JN69   A0A2K6LIW2   A0A2K6P4H4   A0A384C9N2   A0A452Q8V7   V4BH55   A0A2U3ZLS7   A0A2T7NRV4   R7V1S8   A0A3P4PZP4   I3MS29   A0A2K6LIW1   A0A2K6P4H8   L5LHS2   G1PAR9   F7EXM8   A0A2K6DQR3   A0A2K6DQS1   A0A2K5W108   F7A1W4   A0A2K5MJY8   M3YD64   A0A2K5MJZ4   A0A0D9QXR6   G3WBN9   A0A2K5I6Y5   A0A096N0F7   A0A2I3LG05   S7Q1T7   A0A2K5YFV8   A0A2K5YFU6   M3WWS8   A0A1L8HVP2   A0A1B8Y8P3   A0A091IRM8   F6ZDD4   D6WTB3   A0A2R9AVQ6   A0A2I3TM59   A0A2K6DQQ6   A0A2K5W196   A0A2J8PFD3   A0A2J8PFC6   A0A139WFF0  

Pubmed

18725956    26354079    22118469    28756777    23254933    28004739    + More
30249741    28648823    26190115    28812685    20798317    24813606    20010809    25362486    21993624    17431167    21709235    17975172    27762356    20431018    18362917    19820115    22722832    16136131   

EMBL

AB330433    BAG68411.1    ODYU01001854    SOQ38634.1    KT031010    ALM88308.1    + More
NWSH01003879    PCG65728.1    KQ460416    KPJ14932.1    AGBW02014980    OWR40781.1    KZ149907    PZC78270.1    KQ459324    KPJ01658.1    AGBW02007828    OWR54496.1    KPJ01656.1    RSAL01000176    RVE45033.1    AB330456    BAG68434.1    PZC78269.1    KT031033    ALM88331.1    GEDC01025821    JAS11477.1    GFXV01004314    MBW16119.1    ABLF02017913    ABLF02017914    ABLF02017915    GGMR01006004    MBY18623.1    GGMS01012349    MBY81552.1    KZ288262    PBC30352.1    LNIX01000003    OXA57810.1    KB201802    ESO94606.1    KB200750    ESP00348.1    KQ435925    KOX68387.1    KQ435037    KZC14127.1    GEZM01002875    JAV97099.1    QOIP01000012    RLU16307.1    NNAY01000533    OXU27835.1    GDIQ01178003    JAK73722.1    KP294010    AKQ63064.1    KP293979    AKQ63033.1    KB199650    ESP05214.1    NEDP02004282    OWF46089.1    GL449382    EFN82892.1    GDIQ01074229    JAN20508.1    GDIP01027847    LRGB01000868    JAM75868.1    KZS15562.1    AMQN01000412    KQ760243    OAD61277.1    ACTA01068273    GL194651    EFB21559.1    ESP05282.1    PZQS01000010    PVD23914.1    AMQN01006107    KB297637    ELU10276.1    CYRY02035320    VCX15563.1    AGTP01072032    KB111812    ELK25535.1    AAPE02028687    JSUE03033561    JSUE03033562    JSUE03033563    AQIA01054851    AQIA01054852    AQIA01054853    AEYP01065790    AEYP01065791    AEYP01065792    AEYP01065793    AEYP01065794    AQIB01016335    AEFK01211418    AEFK01211419    AEFK01211420    AHZZ02026895    AHZZ02026896    AHZZ02026897    AHZZ02026898    AHZZ02026899    KE164343    EPQ17278.1    AANG04001605    CM004466    OCU00058.1    KV460381    OCA19342.1    KK500905    KFP11354.1    AAMC01103204    AAMC01103205    KQ971352    EFA07466.2    AJFE02062850    AJFE02062851    AJFE02062852    AJFE02062853    AACZ04033881    NBAG03000215    PNI82722.1    PNI82721.1    KYB26646.1   

Proteomes

UP000218220    UP000053240    UP000007151    UP000053268    UP000283053    UP000007819    + More
UP000005203    UP000242457    UP000198287    UP000030746    UP000053105    UP000192223    UP000076502    UP000279307    UP000215335    UP000242188    UP000008237    UP000291021    UP000286642    UP000076858    UP000286641    UP000245341    UP000248481    UP000008912    UP000248482    UP000233180    UP000233200    UP000261680    UP000291022    UP000245340    UP000245119    UP000014760    UP000005215    UP000001074    UP000006718    UP000233120    UP000233100    UP000233060    UP000000715    UP000029965    UP000007648    UP000233080    UP000028761    UP000233140    UP000011712    UP000186698    UP000008143    UP000053119    UP000007266    UP000240080    UP000002277   

PRIDE

B3XXM5    B3XXP8   

Pfam

PF00001   7tm_1

Interpro

IPR000276   GPCR_Rhodpsn        + More
IPR017452   GPCR_Rhodpsn_7TM       
IPR000611   NPY_rcpt       
IPR018247   EF_Hand_1_Ca_BS       
IPR005397   NPFF_rcpt_2       
IPR005395   NPFF_rcpt       
IPR000405   Galanin_rcpt       

ProteinModelPortal

B3XXM5   A0A2H1VED4   A0A0S1YDB4   A0A2A4J221   A0A194RBD9   A0A212EH34   + More
A0A2W1BZI0   A0A194Q809   A0A212FL87   A0A194QDW6   A0A437B4D2   B3XXP8   A0A2W1BT88   A0A0S1YD95   A0A1B6CDE5   A0A2H8TQ41   J9LMX5   A0A2S2NN60   A0A2S2QWP3   A0A087ZYM9   A0A2A3EGD0   A0A226EKJ1   V4ALY3   V4ASX2   A0A0M8ZPP4   A0A1W4XAT5   A0A1W4WZW7   A0A154PQW2   A0A1W4WZV7   A0A1Y1NH52   A0A3L8D745   A0A232FB03   A0A0N8BH82   A0A0K0PUJ7   A0A0K0PUI1   V4ALZ8   A0A210QBI3   E2BMY8   A0A452THC1   A0A3Q7XS02   A0A0P6DPN9   A0A0N8DJF0   X1Z504   A0A3Q7QAK7   A0A2U3YAH7   A0A2Y9I1X3   A0A310SGA3   D2I5D3   A0A2Y9JN69   A0A2K6LIW2   A0A2K6P4H4   A0A384C9N2   A0A452Q8V7   V4BH55   A0A2U3ZLS7   A0A2T7NRV4   R7V1S8   A0A3P4PZP4   I3MS29   A0A2K6LIW1   A0A2K6P4H8   L5LHS2   G1PAR9   F7EXM8   A0A2K6DQR3   A0A2K6DQS1   A0A2K5W108   F7A1W4   A0A2K5MJY8   M3YD64   A0A2K5MJZ4   A0A0D9QXR6   G3WBN9   A0A2K5I6Y5   A0A096N0F7   A0A2I3LG05   S7Q1T7   A0A2K5YFV8   A0A2K5YFU6   M3WWS8   A0A1L8HVP2   A0A1B8Y8P3   A0A091IRM8   F6ZDD4   D6WTB3   A0A2R9AVQ6   A0A2I3TM59   A0A2K6DQQ6   A0A2K5W196   A0A2J8PFD3   A0A2J8PFC6   A0A139WFF0  

PDB

5WS3     E-value=3.44075e-15,     Score=194

KEGG

100174916    K08375 neuropeptide FF receptor 2 | (RefSeq) NGR-A12, BNGR-A12; neuropeptide receptor A12

PATHWAY

04080    Neuroactive ligand-receptor interaction - Bombyx mori (domestic silkworm)

GO

GO:0007218   GO:0004930   GO:0016021   GO:0004983   GO:0043408   GO:0031628   GO:0045761   GO:0008188   GO:2000479   GO:0015629   GO:0005886   GO:0007186   GO:0032870   GO:0005887   GO:0006508   GO:0015074   GO:0030429   GO:0004003   GO:0005634   GO:0006289   GO:0016286  

Length:

176

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

60.53373

Exp number, first 60 AAs:

23.97423

Total prob of N-in:

0.73566

POSSIBLE N-term signal

sequence

inside

1  -  19

TMhelix

20  -  42

outside

43  -  100

TMhelix

101  -  123

inside

124  -  176

 

 

Pi

265.167388

Theta

172.516419

Tajima's D

1.464018

CLR

0.639921

CSRT

0.779061046947653

Interpretation

Uncertain