Silkworm Genome Informatics Database

Gene

KWMTBOMO12828

Pre Gene Modal

BGIBMGA012732

Annotation

neuropeptide_receptor_A12_[Bombyx_mori]

Location

Bomo_Chr22(-):833645-840019 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.11

CDS

ATGTCACAGGGTCTACGGCTGATGAAGGAGAGGAAGCGTGTCGCTTGGATTCTTCTTCTCCTAGCGGTTCTATTCGCTCTCTGTTGGATGCCGTATAACATCATGCAGCTTCTCCTAGACGTCAGTGTTGTCAACGCGAAAGACTTAAGCGCTTATTTACCGTATGCTTTATTCTTGGGTCACGCGAATTCAGCCATAAACCCCATCGTGTATTGTTTCATGACGAGGAAATTCCAGAGATCGGTTAAGAAGTTGCTGTGCGGGAGACCGTTGTGTCAGCAGGCCAAGTTTACGTGGCGATGTAATCAGAAACCGGAGGGATCTTCAAGTGATTATGAATTATACCACGAGCCGCATAAACGGTGCTATCTACAGATGAACACTCTTCGCTACAACGGACATTACTCGGCGCAGATCCCACGCGGGATCGAGACACGTGCCCAAACGACCCAGTTGAGCCACGTGACCCGCTCTTCCCGACGCACCGCGCCCGCCCACGCGCTCTCAGCAGAGATGCTCCAAAGGCATGGCCATATCGATTACAGACGTTGA

Protein

MSQGLRLMKERKRVAWILLLLAVLFALCWMPYNIMQLLLDVSVVNAKDLSAYLPYALFLGHANSAINPIVYCFMTRKFQRSVKKLLCGRPLCQQAKFTWRCNQKPEGSSSDYELYHEPHKRCYLQMNTLRYNGHYSAQIPRGIETRAQTTQLSHVTRSSRRTAPAHALSAEMLQRHGHIDYRR

Similarity

Belongs to the G-protein coupled receptor 1 family.

Uniprot

B3XXM5 A0A0S1YDB4 A0A2A4J221 A0A2W1BNN7 A0A212EH34 A0A194Q809 + More
A0A194RBD9 A0A2J7PMI7 R7TK53

Pubmed

18725956 28756777 22118469 26354079 23254933

EMBL

AB330433 BAG68411.1 KT031010 ALM88308.1 NWSH01003879 PCG65728.1 + More
KZ149953 PZC76568.1 AGBW02014980 OWR40781.1 KQ459324 KPJ01658.1 KQ460416 KPJ14932.1 NEVH01023984 PNF17550.1 AMQN01012560 KB309600 ELT93852.1

Proteomes

UP000218220 UP000007151 UP000053268 UP000053240 UP000235965 UP000014760 + More

PRIDE

B3XXM5

Pfam

PF00001 7tm_1

Interpro

IPR000276 GPCR_Rhodpsn + More
IPR017452 GPCR_Rhodpsn_7TM

ProteinModelPortal

B3XXM5 A0A0S1YDB4 A0A2A4J221 A0A2W1BNN7 A0A212EH34 A0A194Q809 + More
A0A194RBD9 A0A2J7PMI7 R7TK53

PDB

5UNH E-value=4.75217e-07, Score=124

KEGG

100174916 K08375 neuropeptide FF receptor 2 | (RefSeq) NGR-A12, BNGR-A12; neuropeptide receptor A12

GO

GO:0007218 GO:0004930 GO:0016021 GO:0007186 GO:0006508 GO:0015074 GO:0030429 GO:0004003 GO:0005634 GO:0006289 GO:0016286

Length:

183

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

44.19366

Exp number, first 60 AAs:

31.01964

Total prob of N-in:

0.99976

POSSIBLE N-term signal

sequence

inside

1 - 12

TMhelix

13 - 35

outside

36 - 54

TMhelix

55 - 74

inside

75 - 183

Pi

223.858821

Theta

167.167514

Tajima's D

0.298196

CLR

1.312426

CSRT

0.453477326133693

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics