SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12827
Pre Gene Modal
BGIBMGA012747
Annotation
hypothetical_protein_KGM_14827_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 1.442 Extracellular   Reliability : 1.54
 

Sequence

CDS
ATGTCCGGTCTAAGTGTCGTCTTCAATGTGGAGCCCGGAGACTATCCGAGCTGGTCACCTATTCCTTATTACGGAGTCAAGGTCCTCATCAGTGACCCCAACGATTATCCGGAAACAACAGTGCTCTACCGTTTCATAACCTTAGGGGAATCAGTGGCCATCAAAGTTGACCCGATGGTTTTCCAGAGTGAGTCTAACATTCGCAGAGTGGTCCCCGACAAAAGGGCTTGCTGGTTTCACGATGAAGTGATCTTAGGGCACACTGACAGATATAGTTTCGAAACTTGTCACACCGAATGCAAGATGAAGACTTACTTGGATACTTGTGGATGTATCCCCTTTAAGTACCCAAGAGGTAAATACTTTTTTTAA
Protein
MSGLSVVFNVEPGDYPSWSPIPYYGVKVLISDPNDYPETTVLYRFITLGESVAIKVDPMVFQSESNIRRVVPDKRACWFHDEVILGHTDRYSFETCHTECKMKTYLDTCGCIPFKYPRGKYFF

Summary

Similarity
Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
EMBL
BABH01034832    KZ149953    PZC76567.1    ODYU01006832    SOQ49041.1    NWSH01004664    + More
PCG64793.1    AGBW02010320    OWR48728.1    KQ458833    KPJ04917.1    KQ459324    KPJ01659.1    RSAL01000176    RVE45031.1    NEVH01004961    PNF39252.1    KK852549    KDR21541.1    AJVK01011749    NNAY01000660    OXU27138.1    UFQT01001968    SSX32233.1    UFQT01000343    SSX23390.1    AJWK01015896    AJWK01015897    KQ980050    KYN18028.1    PYGN01000758    PSN41205.1    LBMM01003440    KMQ93534.1    AAAB01008986    EAA00269.4    KK852504    KDR22518.1    KQ976782    KYN08320.1    PSN41206.1    APCN01001852    KQ982630    KYQ53387.1    AXCN02001053    KQ971338    KYB27860.1    GL888074    EGI67954.1    NEVH01011198    PNF31805.1    KQ976572    KYM80398.1    KYN08319.1    KQ981953    KYN32299.1    GL436710    EFN71623.1    CH477195    EAT48435.1    NEVH01016331    PNF25545.1    DS231896    EDS44437.1    GECU01034485    JAS73221.1    UFQS01000390    UFQT01000390    SSX03496.1    SSX23861.1    ADTU01010761    ADTU01010762    AXCP01006762    JXUM01050027    JXUM01050028    JXUM01050029    KQ561631    KXJ77947.1    ADTU01028435    GL449100    EFN83252.1    KYN32298.1    KYN18027.1    AXCM01007075    KB632364    ERL93559.1    ATLV01023896    KE525347    KFB49821.1    KQ414612    KOC69152.1    APGK01037684    KB740948    ENN77437.1    APCN01004535    AXCN02001041    EAA00234.4    AXCM01003932    AXCM01007400    APCN01003288    JXUM01096276    KQ564253    KXJ72524.1    JRES01000080    KNC34298.1    KQ434772    KZC03894.1    AAAB01008807    EAA45499.4    DS231856    EDS38483.1    JXUM01054263    KQ561813    KXJ77445.1    CVRI01000074    CRL08251.1    CH478228    EAT33496.1    AAAB01008980    EAA14549.4   
Pfam
PF00858   ASC        + More
PF00013   KH_1
Interpro
IPR001873   ENaC        + More
IPR020903   ENaC_CS       
IPR036612   KH_dom_type_1_sf       
IPR004088   KH_dom_type_1       
IPR004087   KH_dom       
SUPFAM
SSF54791   SSF54791       
Gene 3D

Ontologies

Topology

Length:
123
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00767
Exp number, first 60 AAs:
0.00734
Total prob of N-in:
0.07001
outside
1  -  123
 
 

Population Genetic Test Statistics

Pi
143.941135
Theta
175.038819
Tajima's D
0.704619
CLR
1.529754
CSRT
0.571021448927554
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号