SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12824
Pre Gene Modal
BGIBMGA006113
Annotation
PREDICTED:_uncharacterized_protein_LOC105842570_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.693
 

Sequence

CDS
ATGCCTGAAGGCAAAGTAAAAGACTTAATTAAAAGGAGGGCCTCAATAAAGGCTAAAATAACACAATTCTCTACGTATTTGGATGTCCTACGGGGTTGTGATTATCTCAATGATGTGCAATTCTCGGAACTCCAAGTACGTCTTGAGAAATTTGAAACCTTATACGGGGACTTCGACACTTTTCAGAGTGAGATCGAGATGCTGTCAGACGCGCCGGAAGACCATTATAAGGATCGTGAGTCCATTGAGTCGCAGTACTACAAGCTTGTGGCTTCTGCGCGTACGCTGTTGGATCAACGCAAAAATAATGACGGTAGGTCCGAGAAACACTTCCTGTACGCGTGCGAGTCTTTTAGAAGTTTATCGATTGAAACACGTATTAGGAAAGCAAAAGAGCTTAGAGTGTGCCTTAACTGTCTGAGGCCTGGACACACTGATTCTCAGTATGATCCTTCGGACTATTATCCTCTCACTCCAGCTCATTTCCTAATAGGACGATCTTTACTCTTTGTACCTCAGCCTGATTTAACAAATCATTCAACTTTAACCTCTCTTAAGAGATTCCAGCGTATCGAGTACCTTAAGCAGCATTTTTGGCAGCGATTCTCCAATGAGTACGTCGTGTGGCTACAACAAAAAATGAAATGGCCGACTCAAAAGGGAGACTTAAAAGAAGGTATGATGGTTGTCATCAAGGAGAAGGGACTACCACCTCTTATGTGGCTGCTCGGACGCATTATTCGTCTTTGTCCTGGACGAGATGGAATTACACGTGTGGCAGATATCTTAACCAAGAAAGGTGTTATACGACGCGCTTACAACAACATATGCCCGCTACCACGCCTCCGGCTGGTGCGAGAGAGGAAGCGTGTGGCGCTGATCCTCCTGCTCCTGGCCGTCCTGTTCGCGCTGTGCTGGCTCCCGTACAACATCCTGCAGCTCCTCGTCGACGTGAACGCCGTGCAGGTGGACTCGGTCTCGCTGGTGCTGCCCTACACTCTGCTGCTGGGGCACGCGAATTCGGCAATCAACCCGATAGTGTACTGCCTAATGACGCGCAACTTCAGGCGTTCCCTGCGCAAGCTGATTTGTCACGATCCTGGTAACATAAACTCTAATACTCATTTCCATATGCAAGGATTACGTCAAAAGTCCAACACATCTAGCGGCCGCACCTGCACCACGGTCACCTTCCGCAGCCACTCACAGCCGGGCTCCAGCCGCCCGTACGGCGCGCGGGGGCCGCACGCGGGGGCGCACGCGGGACCTGCGGGGGGATCATGGGGGGCGCACGCGGGGGACGCGCGGGGCGTACGCGCCGTCAAGCCACAATTTATTTAA
Protein
MPEGKVKDLIKRRASIKAKITQFSTYLDVLRGCDYLNDVQFSELQVRLEKFETLYGDFDTFQSEIEMLSDAPEDHYKDRESIESQYYKLVASARTLLDQRKNNDGRSEKHFLYACESFRSLSIETRIRKAKELRVCLNCLRPGHTDSQYDPSDYYPLTPAHFLIGRSLLFVPQPDLTNHSTLTSLKRFQRIEYLKQHFWQRFSNEYVVWLQQKMKWPTQKGDLKEGMMVVIKEKGLPPLMWLLGRIIRLCPGRDGITRVADILTKKGVIRRAYNNICPLPRLRLVRERKRVALILLLLAVLFALCWLPYNILQLLVDVNAVQVDSVSLVLPYTLLLGHANSAINPIVYCLMTRNFRRSLRKLICHDPGNINSNTHFHMQGLRQKSNTSSGRTCTTVTFRSHSQPGSSRPYGARGPHAGAHAGPAGGSWGAHAGDARGVRAVKPQFI

Summary

Uniprot
Pfam
PF18701   DUF5641
Interpro
IPR040676   DUF5641       
ProteinModelPortal
PDB
5XJM     E-value=0.000782663,     Score=102

Ontologies

Topology

Length:
446
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
45.56333
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.99067
inside
1  -  290
TMhelix
291  -  313
outside
314  -  327
TMhelix
328  -  350
inside
351  -  446
 
 

Population Genetic Test Statistics

Pi
401.504696
Theta
189.196461
Tajima's D
1.343832
CLR
0.960008
CSRT
0.747162641867907
Interpretation
Uncertain
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