Silkworm Genome Informatics Database

Gene

KWMTBOMO12820

Annotation

PREDICTED:_neuropeptide_receptor_A35_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr22(+):636640-660485 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 4.845

CDS

ATGACACTTGCTTTCGTAACAAACATTTTCCTTGTGAACCTTTCTGTTGCTGATCTCCTGGTGACCTTGTTCTGCATGCCAGTGCAGATTGCCAAGTCAGTGACCCTGCTGTGGTACTTCGGTGAAGTAATGTGCAAAACCGTCAATTTCCTTCAAGGAGTGGCAGTAGCTTCTAGCGTCTTCACCATAACAGCCATGTCAGTAGATCGGTACTTGGCGATCACTCAGTCCCTTCGGCAACCTTGGATGCCGTCGCGACGTGGCGCGTGCGGACTTCTTGTTTGTCTCTGGCTGATTGCTCTGGCGATCTTCGCGCCGCTGCTTGCTGTGGCGGCAGTTGAACGGGAACGGGTACCATCTTTGTCCAGAACAAAAAATGGATCGATATTTTCCAAATAA

Protein

MTLAFVTNIFLVNLSVADLLVTLFCMPVQIAKSVTLLWYFGEVMCKTVNFLQGVAVASSVFTITAMSVDRYLAITQSLRQPWMPSRRGACGLLVCLWLIALAIFAPLLAVAAVERERVPSLSRTKNGSIFSK

Miscellaneous

The sequence shown here is derived from an EMBL/GenBank/DDBJ third party annotation (TPA) entry.

Similarity

Belongs to the G-protein coupled receptor 1 family.

Uniprot

B3XXP8 A0A2W1BT88 A0A212FL87 A0A437B4D2 A0A0S1YD95 A0A194QDW6 + More
A0A194RBD9 A0A194Q809 A0A2W1BZI0 B3XXM5 A0A0S1YDB4 A0A2A4J221 A0A2H1VED4 V4ALZ8 A0A212EH34 J7SF97

Pubmed

18725956 28756777 22118469 26354079 23254933 16378592 + More

EMBL

AB330456 BAG68434.1 KZ149907 PZC78269.1 AGBW02007828 OWR54496.1 + More
RSAL01000176 RVE45033.1 KT031033 ALM88331.1 KQ459324 KPJ01656.1 KQ460416 KPJ14932.1 KPJ01658.1 PZC78270.1 AB330433 BAG68411.1 KT031010 ALM88308.1 NWSH01003879 PCG65728.1 ODYU01001854 SOQ38634.1 KB199650 ESP05214.1 AGBW02014980 OWR40781.1 BK005733 DAA35193.1

Proteomes

UP000007151 UP000283053 UP000053268 UP000053240 UP000218220 UP000030746 + More

PRIDE

B3XXP8 B3XXM5

Pfam

PF00001 7tm_1

Interpro

IPR000276   GPCR_Rhodpsn        + More
IPR000611   NPY_rcpt
IPR017452   GPCR_Rhodpsn_7TM

ProteinModelPortal

B3XXP8 A0A2W1BT88 A0A212FL87 A0A437B4D2 A0A0S1YD95 A0A194QDW6 + More
A0A194RBD9 A0A194Q809 A0A2W1BZI0 B3XXM5 A0A0S1YDB4 A0A2A4J221 A0A2H1VED4 V4ALZ8 A0A212EH34 J7SF97

PDB

5WS3 E-value=1.38434e-14, Score=187

KEGG

100187575 no KO assigned | (RefSeq) NGR-A35, BNGR-A35; neuropeptide receptor A35

GO

GO:0016021 GO:0004983 GO:0004930 GO:0007218 GO:0007186 GO:0003676 GO:0015074 GO:0030429 GO:0004003 GO:0005634 GO:0006289 GO:0016286

Length:

132

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

65.51667

Exp number, first 60 AAs:

33.60597

Total prob of N-in:

0.93609

POSSIBLE N-term signal

sequence

inside

1 - 8

TMhelix

9 - 31

outside

32 - 50

TMhelix

51 - 68

inside

69 - 88

TMhelix

89 - 111

outside

112 - 132

Pi

209.116543

Theta

162.851802

Tajima's D

0.356136

CLR

13.99613

CSRT

0.469776511174441

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree