SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12815
Annotation
PREDICTED:_protein_vein_isoform_X1_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.745
 

Sequence

CDS
ATGAAGACCCGCGGGCGCGCGGCGTTGTGCTGGGCTGTGCTGTGCGTGTGCTGTGTGGGCGCGGTGGCTGCGCCGCGCCGCCTCTACTGCGAGCGAGCCGACGTGGCCTGGCGCGCCTACCGCGCTCCCGCCGCCTTCGAGGCGCGCGTGCAGTCGCTGGCCGCCGACGCCGCCACCGTGCAGGTCCGCCGCGTGTTGCGAGACCGCGGCCGCTGGCTGCACGAGGACGCCGTCGTCCGCCTCAAGCTGCCGCCCGAGGACCTCGAGTGCTTGGGACGATTCGAAGTGCCCTTGAAGAACAGACGGAACTATATCGTGTTCGCGGAGAGGCGGGGCCGCACGGCCGTCGCGCTCGGCCCGCCGCTGAAGAGAACCGGGAAGTTGCTCAAGAGGATCCGGGCGGTCTACAAGTCTGGATACAGTGAGTGCCTAGTGATACTGCACCGTACGTGGAGCGCCCGACCACATGGAACGTCGCGCCCTACGCGCGGGGGCGACCGCTCGACCCTCGCCCCGCCGTTGTTTTGA
Protein
MKTRGRAALCWAVLCVCCVGAVAAPRRLYCERADVAWRAYRAPAAFEARVQSLAADAATVQVRRVLRDRGRWLHEDAVVRLKLPPEDLECLGRFEVPLKNRRNYIVFAERRGRTAVALGPPLKRTGKLLKRIRAVYKSGYSECLVILHRTWSARPHGTSRPTRGGDRSTLAPPLF

Summary

Ontologies

GO

Topology

SignalP
Position:   1 - 23,         Likelihood:  0.982686
 
 
Length:
175
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
18.76443
Exp number, first 60 AAs:
18.76106
Total prob of N-in:
0.96585
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  24
outside
25  -  175
 
 

Population Genetic Test Statistics

Pi
305.540178
Theta
231.744446
Tajima's D
1.284795
CLR
25.276397
CSRT
0.735963201839908
Interpretation
Uncertain
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