Gene

KWMTBOMO12813

Pre Gene Modal

BGIBMGA012735

Annotation

PREDICTED:_netrin_receptor_UNC5C-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr22(-):146775-161509      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.802

CDS

ATGATTACAATATTTATTGGCGAAGTAAAAAACGGAGATCCAGAACCAACGACAGCAAAAGAACTAAGACCAGAGTACATACATCCAGATGGCCTACTAACCTTCGACCCTTACCTTTCTGACATAAAACCTCAAGAGGAAGAAGAAGAAGACGATTATATACCTTTACCAGAAAACGATGAAACCATTGATGGTCTTCCAATATTCTTATTAGAACCTAAAAACTCGTATGTCATTAGGAATAAACCAGCCACGATTCTCTGTAGGGCTGCCAATGCTCTTCAAGTGTTCTTCAAATGCAATGACGTGAGAACTGATAAGACAGTACAATACGAACACGTGGATCCTCAGAATGGAGTGAGGGTGGTCGAAGCAGAGCTAAATGTGACCAGAAATGAGTTAGATGAATATTTCGGTGGAAAATACGGGTGTGAGTGCTACGCTTGGAATAGTAAAGGGCGGATTCGCAGTCAGTCCATTTTCATCGAATACGCTTTCATCAAGAAGCATTTCGTGCAGCAACCGCAGTCAGCGACAGTCGAATCAGGCAAGAGCGTCACATTCCGATGTATTCCGCCACAAGCCACACCAGCTCCAAGTCTCAAATGGACAAGAAATGGAGTGCCTATTGAGGCAAAGGACGAAAATTTAGTGCTTCCTAATGTTGGGTTGCAGGACATGACAAACTACACCTGTATAGCTGAGAACGTCGCCGGTCGGCGCGAGTCGAACGTGGCCGTGCTCTCTGTATACGTAAATGGAGGCTGGTCAGCCTGGTCTCCGTGGATGCCGTGTCGTTGCGGCTCCAGAATTAGCGGAAGACGTCGCACGAGAACTTGCACAGAGCCTCCGCCGGCCAACGGAGGAGCGCCCTGCAGAGGCCAGGCCTCGCAGAGCGACGAGGAATGCTTACGATGTCAGACCGAAGGTTCATGGTCTCCGTGGAGTGCCTGGTCCACTTGTAGTGGAGACTGCGTCAGGGTCCGTCGGAGGGAGTGCACCGGAGAGTGTACCGGGTCTACCTTGCAACATGCCACTTGCGTCGATGGCATGTGTCCCGCTGGCCTGAGGCTGTATAACACTAACGACGTCACTATGTACGTGGGAGTTGGCATCACGGTGGCGATGCTGGTGGCGGGAGCTACCATCCTCTACGTCTGGTGCAGATTTAGGAGCAGGCCCGGCTACACCGCCGCCAGGGCAGGTACTCCAAAACACATCGGTCGAGATAAAGGTAACGCAGGACCGGACTTGACGAGGGCCTGCAACGAGTATTGGATGCAGGGGCCCGACAATCATTACGACATGCCTCACGTGAGAGACAGTTATTCTACCCCGTTTGGAAACAGAAGTAGACATCAGTCGTCCATGGGAAGTAATCACTACGAGATGAAACCGTACAGCCCTTCGGGCGAATCCGCCTCTAGCTGCTACACAAATTCCCGAACAGTGACCTCGAGGTCCAGTGAATGTTCCTCATCCCAATTAGCAGATTTGGTGACCGGAACCCCCACCCCGGTGTCCAAGGTCGACGTGGCGGTCACCATGCCGACCAGCCACACAGACAACAGCTACAGAGACAAAATATGCTTGACCATAGTTAAATAG

Protein

MITIFIGEVKNGDPEPTTAKELRPEYIHPDGLLTFDPYLSDIKPQEEEEEDDYIPLPENDETIDGLPIFLLEPKNSYVIRNKPATILCRAANALQVFFKCNDVRTDKTVQYEHVDPQNGVRVVEAELNVTRNELDEYFGGKYGCECYAWNSKGRIRSQSIFIEYAFIKKHFVQQPQSATVESGKSVTFRCIPPQATPAPSLKWTRNGVPIEAKDENLVLPNVGLQDMTNYTCIAENVAGRRESNVAVLSVYVNGGWSAWSPWMPCRCGSRISGRRRTRTCTEPPPANGGAPCRGQASQSDEECLRCQTEGSWSPWSAWSTCSGDCVRVRRRECTGECTGSTLQHATCVDGMCPAGLRLYNTNDVTMYVGVGITVAMLVAGATILYVWCRFRSRPGYTAARAGTPKHIGRDKGNAGPDLTRACNEYWMQGPDNHYDMPHVRDSYSTPFGNRSRHQSSMGSNHYEMKPYSPSGESASSCYTNSRTVTSRSSECSSSQLADLVTGTPTPVSKVDVAVTMPTSHTDNSYRDKICLTIVK

Similarity

Belongs to the serpin family.

Uniprot

A0A2W1BV79   A0A194RBR7   H9JT73   A0A2A4JJ15   A0A2H1V962   A0A3S2TN21   + More
A0A194Q7Z8   A0A0L7KYD2   A0A212EVY5   A0A437BJV8   A0A194Q8C5   A0A2A4JM37   A0A2A4JLB3   A0A2W1BXA1   A0A154PEH5   A0A0K8TDJ2   A0A1Y1KGW7   A0A146LCK0   A0A0A9VZT2   A0A0N1I685   A0A195CJV7   A0A2A4IZN1   A0A194PXF9   A0A2W1BMT9   A0A067RP65   A0A1B6BY64   A0A1B6KVK9   A0A1B6LH58   A0A0L7RHT7   W8B2P2   W8AYM5   A0A0A1X6V4   A0A088A971   A0A034W4Y3   A0A158NTE6   A0A2S2PSX4   A0A0K8UWV4   A0A3B3YP05   A0A3B5RDJ2   A0A3B3XAI2   A0A3B3VM99   A0A151X1U2   A0A3P9Q5U0   A0A3P9Q5P4   F4W406   A0A146ZII3   A0A2H8TRB2   A0A2I4D0E9   A0A437D086   A0A3Q3BCL4   A0A026VUN0   A0A2I4D0E5   H2LLZ0   H2LLY9   A0A195B423   A0A026VX76   A0A0M9A636   A0A1A7ZTP1   A0A1A8Q8H3   A0A1A8C1H1   A0A1A8V5D7   A0A3Q0R8V6   A0A3Q3JBA1   A0A3B3XAX3   A0A3Q1IIL7   A0A087YKP9   J9KU90   M4ARZ4   A0A3B3YP00   A0A3P9Q675   A0A3B4YRF8   G3NYB5   A0A3Q1IQU9   A0A3Q2WVM9   A0A3B4FZ93   A0A3P8QJH3   A0A3B4VIA3   A0A3Q4H2S8   E2APQ4   A0A3Q3MXJ1   A0A3P8YXM7   A0A2S2PVW1   A0A146UWS2   Q4W5H4   U5EYZ9   A0A3B4XEP7   A0A3Q3BCI7   A0A195DVW8   A0A3B3H6L5  

Pubmed

28756777    26354079    19121390    26227816    22118469    28004739    + More
26823975    25401762    24845553    24495485    25830018    25348373    21347285    23542700    21719571    24508170    17554307    25186727    20798317    25069045   

EMBL

KZ149907    PZC78261.1    KQ460416    KPJ14924.1    BABH01034762    NWSH01001320    + More
PCG71708.1    ODYU01001331    SOQ37368.1    RSAL01000046    RVE50542.1    KQ459324    KPJ01648.1    JTDY01004517    KOB68059.1    AGBW02012107    OWR45646.1    RVE50538.1    KPJ01644.1    NWSH01001062    PCG72846.1    PCG72847.1    PZC78254.1    KQ434870    KZC09610.1    GBRD01002257    JAG63564.1    GEZM01086422    JAV59460.1    GDHC01018809    GDHC01013807    JAP99819.1    JAQ04822.1    GBHO01043896    JAF99707.1    KQ460874    KPJ11666.1    KQ977642    KYN01011.1    NWSH01004342    PCG65211.1    KQ459586    KPI98031.1    KZ150134    PZC73003.1    KK852508    KDR22415.1    GEDC01031076    JAS06222.1    GEBQ01024488    JAT15489.1    GEBQ01016935    JAT23042.1    KQ414585    KOC70552.1    GAMC01015247    JAB91308.1    GAMC01015248    JAB91307.1    GBXI01007470    JAD06822.1    GAKP01009178    GAKP01009177    GAKP01009176    JAC49774.1    ADTU01025884    ADTU01025885    GGMR01019327    MBY31946.1    GDHF01025673    GDHF01021499    JAI26641.1    JAI30815.1    KQ982585    KYQ54236.1    GL887491    EGI71002.1    GCES01020152    JAR66171.1    GFXV01004337    MBW16142.1    CM012445    RVE68149.1    KK107847    EZA47457.1    KQ976625    KYM78959.1    EZA47459.1    KQ435727    KOX77995.1    HADY01007659    SBP46144.1    HAEH01003003    HAEI01004676    SBR89826.1    HADZ01008765    SBP72706.1    HAEJ01014574    SBS55031.1    AYCK01002916    AYCK01002917    AYCK01002918    AYCK01002919    ABLF02041018    GL441572    EFN64605.1    GGMS01000443    MBY69646.1    GCES01076885    JAR09438.1    AC098584    AAY41022.1    GANO01001690    JAB58181.1    KQ980295    KYN16887.1   

Proteomes

UP000053240    UP000005204    UP000218220    UP000283053    UP000053268    UP000037510    + More
UP000007151    UP000076502    UP000078542    UP000027135    UP000053825    UP000005203    UP000005205    UP000261480    UP000002852    UP000261500    UP000075809    UP000242638    UP000007755    UP000192220    UP000264800    UP000053097    UP000001038    UP000078540    UP000053105    UP000261340    UP000261600    UP000265040    UP000028760    UP000007819    UP000261360    UP000007635    UP000264840    UP000261460    UP000265100    UP000261420    UP000261580    UP000000311    UP000261640    UP000265140    UP000078492   

PRIDE

H9JT73    Q4W5H4   

Pfam

PF00090   TSP_1        + More
PF17217   UPA
PF00791   ZU5
PF00531   Death
PF07679   I-set
PF00079   Serpin

Interpro

IPR013783   Ig-like_fold        + More
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR036383   TSP1_rpt_sf       
IPR037936   UNC5       
IPR000884   TSP1_rpt       
IPR011029   DEATH-like_dom_sf       
IPR000906   ZU5_dom       
IPR000488   Death_domain       
IPR033772   UPA       
IPR013098   Ig_I-set       
IPR042185   Serpin_sf_2       
IPR042178   Serpin_sf_1       
IPR023796   Serpin_dom       
IPR036186   Serpin_sf       
IPR042154   Death_UNC5C       

SUPFAM

SSF82895   SSF82895        + More
SSF48726   SSF48726       
SSF47986   SSF47986       
SSF56574   SSF56574       

Gene 3D

2.20.100.10     2.60.40.10     2.30.39.10     3.30.497.10    

CDD

cd08799  Death_UNC5C

ProteinModelPortal

A0A2W1BV79   A0A194RBR7   H9JT73   A0A2A4JJ15   A0A2H1V962   A0A3S2TN21   + More
A0A194Q7Z8   A0A0L7KYD2   A0A212EVY5   A0A437BJV8   A0A194Q8C5   A0A2A4JM37   A0A2A4JLB3   A0A2W1BXA1   A0A154PEH5   A0A0K8TDJ2   A0A1Y1KGW7   A0A146LCK0   A0A0A9VZT2   A0A0N1I685   A0A195CJV7   A0A2A4IZN1   A0A194PXF9   A0A2W1BMT9   A0A067RP65   A0A1B6BY64   A0A1B6KVK9   A0A1B6LH58   A0A0L7RHT7   W8B2P2   W8AYM5   A0A0A1X6V4   A0A088A971   A0A034W4Y3   A0A158NTE6   A0A2S2PSX4   A0A0K8UWV4   A0A3B3YP05   A0A3B5RDJ2   A0A3B3XAI2   A0A3B3VM99   A0A151X1U2   A0A3P9Q5U0   A0A3P9Q5P4   F4W406   A0A146ZII3   A0A2H8TRB2   A0A2I4D0E9   A0A437D086   A0A3Q3BCL4   A0A026VUN0   A0A2I4D0E5   H2LLZ0   H2LLY9   A0A195B423   A0A026VX76   A0A0M9A636   A0A1A7ZTP1   A0A1A8Q8H3   A0A1A8C1H1   A0A1A8V5D7   A0A3Q0R8V6   A0A3Q3JBA1   A0A3B3XAX3   A0A3Q1IIL7   A0A087YKP9   J9KU90   M4ARZ4   A0A3B3YP00   A0A3P9Q675   A0A3B4YRF8   G3NYB5   A0A3Q1IQU9   A0A3Q2WVM9   A0A3B4FZ93   A0A3P8QJH3   A0A3B4VIA3   A0A3Q4H2S8   E2APQ4   A0A3Q3MXJ1   A0A3P8YXM7   A0A2S2PVW1   A0A146UWS2   Q4W5H4   U5EYZ9   A0A3B4XEP7   A0A3Q3BCI7   A0A195DVW8   A0A3B3H6L5  

PDB

5FTT     E-value=2.96662e-39,     Score=408

KEGG

101741765    K07521 netrin receptor unc-5 | (RefSeq) netrin receptor UNC5C-like

GO

GO:0005042   GO:0016021   GO:0007411   GO:0005515   GO:0006979   GO:0020037   GO:0003676   GO:0015074   GO:0030429   GO:0004003   GO:0005634   GO:0006289   GO:0016286  

PANTHER

PTHR12582  

Length:

535

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.89196

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02440

outside

1  -  364

TMhelix

365  -  387

inside

388  -  535

 

 

Pi

300.959487

Theta

189.827332

Tajima's D

2.862379

CLR

10.402839

CSRT

0.972751362431878

Interpretation

Uncertain