SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12808  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012738
Annotation
PREDICTED:_peroxidase-like_isoform_X1_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.301
 

Sequence

CDS
ATGTTATATGGAAGCGATCTGAAATCGCTTTTGGCAAAAGGAAGACTATTCAAAGGAGGCTTACTGAAGTATGAGATTTCGAATGGAAGAATCTGGCCTCCAAGCACCAAATCTCAAATTAACCTTTGCTTATTAAACGACAAGCCTAGAGAAACAAGATGTCATGCAACACCCGAAGACGGTAGCAATACACTTGCTAGTGTCAATATAATGGCTGTTTGGTTTTGGAGGTACCACAATATCATCGCGGAACAATTGGCAAAGATCAACCCGTGTTGGGATGACAATACGCTTTTTAATACGGCGAGAGACATAAATATCGCTGTAGCTCTACAGATATATTTTTATGAGCTGTTACCTCTTTTCTTGGGTCGTGAAAATTTGGTCAGAGATGGTGTATTATCGCCTTCATTTGGATACAGAGATGCGTACAATCCTGAAATACTACCACAAGTTTCGCTCGAGTACCCGTTCGTCTTGCGATGGCTCCACAGCGTCCAGGAAGGCACCCTTAAAATGTACGACACAAAGGGATATTATCTCAAGCAGTATCCGATAGTGAACCTCACTTTGAGAACAGGCTTCTTCGATGTGGACAATAACATAGATTATATAACACAAGGAGCTTTCAGACAAGGCAGTGCTAATATTGACCATACAGCTGATCCTGATATCGTTGATATCGGCTTGGGTCCTCACCAAAGAGCGTCAGATCTGATGACAAACGACATCTCCAAGAACAGATATTTTGGGTTCCAGCCTTACGTTAAATACCACGAATTTTGCTTCGGTAAAACGATCAAAAAATGGGGAGACCTGGAAGGAGTCATTGACCCCGAGAGGATCGAAATACTCAAAGATTTGTACGAAGATGTTGAAGACATGGACCTCTTGGCCGGTATTTGGGTTGAGAGGCGCATTAAAGGTGGTTTCGTGCCGCCAACCTTCTACTGCTTGGTAGTGGAACAGCTAGTCCGCAATATTGTATCTGATAGACATTGGTACGAGAGCTCGGAAAGACCCAACGCCTTTAGTTTACAACAACTTTTCGAAATAAGGAAAGCTAGTATAGCTCGAATCCTTTGTGACGTTGGCGATAAGGTCACCGAAATACAGCCTCAAGCGTTCCTCAGACCGCATTCAAGAAACAGAATAAGTCGCTGCGAGATTATTCCCAGCATCGATTTCGCAGCCTGGAAGGACTTCAAATGCAATGAACAGTACACCTGGCAATTAGTGAATGAATAG
Protein
MLYGSDLKSLLAKGRLFKGGLLKYEISNGRIWPPSTKSQINLCLLNDKPRETRCHATPEDGSNTLASVNIMAVWFWRYHNIIAEQLAKINPCWDDNTLFNTARDINIAVALQIYFYELLPLFLGRENLVRDGVLSPSFGYRDAYNPEILPQVSLEYPFVLRWLHSVQEGTLKMYDTKGYYLKQYPIVNLTLRTGFFDVDNNIDYITQGAFRQGSANIDHTADPDIVDIGLGPHQRASDLMTNDISKNRYFGFQPYVKYHEFCFGKTIKKWGDLEGVIDPERIEILKDLYEDVEDMDLLAGIWVERRIKGGFVPPTFYCLVVEQLVRNIVSDRHWYESSERPNAFSLQQLFEIRKASIARILCDVGDKVTEIQPQAFLRPHSRNRISRCEIIPSIDFAAWKDFKCNEQYTWQLVNE

Summary

EMBL
ODYU01008556    SOQ52260.1    NWSH01006580    PCG63355.1    KZ149907    PZC78257.1    + More
KQ459324    KPJ01645.1    KPJ01647.1    KQ460416    KPJ14922.1    AK401278    BAM17900.1    KPJ01646.1    KPJ14923.1    RSAL01000046    RVE50539.1    AGBW02012596    OWR44740.1    AK405426    BAM20744.1    NWSH01002854    PCG67434.1    PZC78258.1    ODYU01007226    SOQ49823.1    ODYU01006337    SOQ48101.1    NWSH01001320    PCG71707.1    KJ995811    AIN39494.1    PZC78259.1    ODYU01007063    SOQ49501.1    ODYU01007325    SOQ50002.1    ODYU01007479    SOQ50286.1    BABH01028746    BABH01028747    BABH01028748    BABH01034743    BABH01034744    ODYU01004596    SOQ44641.1    RSAL01001640    RVE40744.1    BABH01034746    BABH01034747    RSAL01000273    RVE43156.1    RSAL01000844    RVE41114.1    KQ459837    KPJ19761.1    RVE41111.1    NWSH01006414    PCG63451.1    KZ149956    PZC76461.1    KQ459564    KPI99614.1    PZC76463.1    NWSH01001116    PCG72533.1    NWSH01006200    PCG63597.1    BABH01013455    PZC76464.1    RSAL01000231    RVE43837.1    PCG72532.1    BABH01013458    BABH01013459    BABH01013460    ODYU01000046    SOQ34155.1    RSAL01000083    RVE48485.1    AF098717    AAC97504.1    CH477371    EAT42428.1    CH478998    EAT32533.1    JXUM01046680    KQ561486    KXJ78429.1    DS231994    EDS30856.1    DS232811    EDS45917.1    KQ760645    OAD59676.1    UFQT01001180    SSX29359.1    ADMH02000540    ETN66032.1    SSX29360.1    AXCN02001762    AAAB01008848    APCN01003535    EAA07042.4    CH916369    EDV93847.1    AXCM01004244    CH964272    KRF99908.1    EDW83879.1    GEDC01020121    JAS17177.1    CH933806    EDW13691.2    JRES01000032    KNC34772.1    GAKP01002541    JAC56411.1    GAKP01002543    GAKP01002542    JAC56410.1    JN003585    AEJ88361.1    GBYB01011499    JAG81266.1    GBXI01013522    JAD00770.1    CM000364    EDX12625.1    GDHF01011408    GDHF01008719    JAI40906.1    JAI43595.1    CH480827    EDW44795.1    CH902617    EDV42305.1    OUUW01000007    SPP83195.1    CH479179    EDW25175.1    GDKW01003332    JAI53263.1    CH940652    EDW58924.2   
Pfam
PF03098   An_peroxidase        + More
PF00083   Sugar_tr
PF00075   RNase_H
PF00012   HSP70
Interpro
IPR010255   Haem_peroxidase_sf        + More
IPR037120   Haem_peroxidase_sf_animal       
IPR019791   Haem_peroxidase_animal       
IPR029585   Pxd-like       
IPR005828   MFS_sugar_transport-like       
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR036397   RNaseH_sf       
IPR002156   RNaseH_domain       
IPR012337   RNaseH-like_sf       
IPR013126   Hsp_70_fam       
SUPFAM
SSF48113   SSF48113        + More
SSF103473   SSF103473       
SSF53098   SSF53098       
Gene 3D
PDB
6ERC     E-value=3.97403e-21,     Score=250

Ontologies

Topology

Length:
415
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.12571
Exp number, first 60 AAs:
0.0001
Total prob of N-in:
0.00707
outside
1  -  415
 
 

Population Genetic Test Statistics

Pi
5.156659
Theta
62.040242
Tajima's D
-1.611505
CLR
553.329788
CSRT
0.048047597620119
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
29197581 ASDIMTNDISK 95.83 9e-12
29197581 QGSANIDHTADPDIVDIGIGPHQR 100.00 1e-07
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