Gene

KWMTBOMO12806

Pre Gene Modal

BGIBMGA007145

Annotation

PREDICTED:_vegetative_incompatibility_protein_HET-E-1-like_[Bombyx_mori]

Location

Bomo_Chr21(-):15262645-15264735      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.268

CDS

ATGGACGTCGCCGAGCCCACCCTGGTGCAGGCCTTGCGCTCTCATCGGGGCGAAGTGACCTGCGTCGACGCCAGCATCGCGAGAATGGTGACCGGAGGGGGCGACCGAACCATCCGACTCTGGCGGTGGCGGGCCGGGGCCGGCTGGGAGGAGGCCGCCGCTGCTCCTGCAGCTCATCGGTACGGTATCACCGCGGCACGGTTCGCTCCCACGGGCGTGCTGATCGCATCGGGTGGCGTGGACGGTAACCTGCGGGTGTGGTGCGGGCGCTCGCTGGCCGCGCGCCGCCTGCTGTCCGCGCCGAGCGCCGTGGCGGTGCGTGCGCTGTGCTGGGCGGCCGAGGGCGCGCGGCTGCTGGCCGGCCACGACGATGGCTCGCTGTGCGTTTGGAACGTGTCTCGGGGCGCGCTGCTGTCGCGACTCACCGCGCACGAGGGCGCCCTGCACGCCGTGTCAGTCTTGGCGAGAGGGGCCCTCTTGCTGACGACATGCACGCACGGTGTGCTCAAAGTGTTCGACCTAGCAGAGGTGTGCACGAGCGGACTAGACGGGTCGATGGTGGCCTTGGAGTGGAGGGACGGAGTGCACGACCTGGGCGCGCTGTGTGCCGACGCGACCGAGGACGGCGCGCTGTGTGCGACGGGCGGGCACGACGCGCGCGTGTGCGTGTGGCGCGCGGTCCGCGAGGGGGGCGTGTGGTCGGTGCGGGGCGCGGGAGTGCTGGAGGGTCACACGGCGGCGGTGACGTCACTGCGGTGGGCGAGCCCGCTGCTGGCCTCTGGCTCGCTGGACCGCACAGCTCGGCTCTGGTCATCGGCGGAGGGCGCGTGTCTCCGCGTGGTGCACGCTCACCCGCGCTACCTCACTAGCGTGGTCCTCGCACCAGATAACGCTTACCTGATCACCGCTGCCATGCAACAGTATTCTATAGAAACTGTCCTACAACTGTGA

Protein

MDVAEPTLVQALRSHRGEVTCVDASIARMVTGGGDRTIRLWRWRAGAGWEEAAAAPAAHRYGITAARFAPTGVLIASGGVDGNLRVWCGRSLAARRLLSAPSAVAVRALCWAAEGARLLAGHDDGSLCVWNVSRGALLSRLTAHEGALHAVSVLARGALLLTTCTHGVLKVFDLAEVCTSGLDGSMVALEWRDGVHDLGALCADATEDGALCATGGHDARVCVWRAVREGGVWSVRGAGVLEGHTAAVTSLRWASPLLASGSLDRTARLWSSAEGACLRVVHAHPRYLTSVVLAPDNAYLITAAMQQYSIETVLQL

Uniprot

H9JCA0   A0A2H1VZD1   A0A212ESZ3   A0A194R3G4   A0A194Q3Y1   A0A2J7PVL8   + More
K7JED7   A0A088ASU3   A0A2A3EB02   D6WQH9   A0A2P8YPC2   A0A3L8E2R9   A0A182JPY5   A0A139WF14   A0A139WEW5   U4UJ60   N6U913   E2BYA8   A0A026W0W3   A0A182WKG1   A0A158NNL9   A0A1Y1K1C5   A0A154P760   A0A0L8I9V3   A0A0L7R6X0   A0A195DKV6   A0A2M4CUQ1   A0A1Y1JZX4   A0A443SS77   A0A2M4BMS0   A0A2M3ZHX8   E2A2S2   A0A182LJC4   L7MFN9   A7UTR7   A0A2M4CUY8   A0A131YKE3   A0A182HLV5   A0A224Z851   A0A210QWZ3   F4WQI6   A0A1E1XH47   A0A0N0U3D0   A0A087YI14   A0A151X990   A0A195B344   A0A0C9R8K3   A0A315W8U8   A0A3B3YQW6   A0A195F8A4   A0A195CXN1   A0A2M4AMP7   A0A267GZK6   E9IYY5   M4AAC7   A0A267EIS2   A0A3S3NQR3   D5G209   A0A1D2MFZ2   T1KSH3   A0A2H5WYD4   V4CKW6   A0A147BQ60   A0A182FEI2   A0A131Y150   A0A177Q2R3   X6LPR6   A0A3Q1FV70   A0A0C9VNX5   A0A2G6PBK2   A0A3Q1B8H5   A0A1V6WJB2   X6ML19   A0A3P9JVY8   A0A146MAQ4   A0A0F7ZFW0   A0A2H5WYI2   A0A2C5WW89   A0A017SNX0   H2MQH7   A0A131ZSS8   A0A0A9WSG0   D5G222   A0A401RV60   A0A3Q3B336   A0A437C5Y1   A0A0M0SLX2   A0A087T5W1   A0A3P9IB20   X6MIE6   A0A0M0K3S6   J9JWF4   H3DGE9   A0A3B3RDF6   A0A2C5WVG7   A0A3B3RET7   A0A2C5WT11   Q4RQJ9   A0A1V6WJ40  

Pubmed

19121390    22118469    26354079    20075255    18362917    19820115    + More
29403074    30249741    23537049    20798317    24508170    21347285    28004739    20966253    25576852    12364791    14747013    17210077    26830274    28797301    28812685    21719571    28503490    29703783    21282665    23542700    20459612    27289101    23254933    29652888    24332546    28368369    17554307    26823975    25359922    23931120    24563841    24811710    26555130    25401762    30297745    15496914    29240929   

EMBL

BABH01031717    BABH01031718    BABH01031719    BABH01031720    BABH01031721    ODYU01005329    + More
SOQ46066.1    AGBW02012675    OWR44615.1    KQ460870    KPJ11780.1    KQ459562    KPI99719.1    NEVH01020945    PNF20385.1    AAZX01000483    AAZX01000484    AAZX01009854    AAZX01012599    AAZX01015769    AAZX01016855    AAZX01018156    AAZX01020182    AAZX01023807    KZ288312    PBC28389.1    KQ971354    EFA06072.2    PYGN01000453    PSN46100.1    QOIP01000001    RLU26977.1    KYB26451.1    KYB26452.1    KB632326    ERL92463.1    APGK01035113    APGK01035114    APGK01035115    KB740923    ENN78180.1    GL451420    EFN79387.1    KK107534    EZA49221.1    ADTU01021658    GEZM01101511    JAV52617.1    KQ434822    KZC07174.1    KQ416192    KOF98276.1    KQ414646    KOC66620.1    KQ980765    KYN13472.1    GGFL01004898    MBW69076.1    GEZM01101512    JAV52616.1    NCKV01000530    RWS30374.1    GGFJ01005112    MBW54253.1    GGFM01007413    MBW28164.1    GL436211    EFN72257.1    GACK01002229    JAA62805.1    AAAB01008960    EDO63689.1    GGFL01004897    MBW69075.1    GEDV01009140    JAP79417.1    APCN01004263    GFPF01013363    MAA24509.1    NEDP02001444    OWF53267.1    GL888273    EGI63513.1    GFAC01000551    JAT98637.1    KQ435936    KOX68324.1    AYCK01002230    AYCK01002231    KQ982383    KYQ56932.1    KQ976641    KYM78707.1    GBYB01009187    JAG78954.1    NHOQ01000293    PWA31396.1    KQ981744    KYN36289.1    KQ977141    KYN05418.1    GGFK01008557    MBW41878.1    NIVC01000104    PAA90722.1    GL767077    EFZ14223.1    NIVC01002033    PAA61423.1    PAA90763.1    NCKU01012787    NCKU01012703    RWR99981.1    RWS00003.1    FJ897803    ADA68811.1    LJIJ01001416    ODM91794.1    CAEY01000425    BEHR01000039    GBC93960.1    KB200129    ESP02890.1    GEGO01002501    JAR92903.1    GEFM01002572    JAP73224.1    LSTA01000067    OAI41768.1    ASPP01035032    ETO02735.1    KN837121    KIJ43762.1    PDTT01000026    PIE81892.1    MOOB01000253    OQE62988.1    ASPP01019972    ETO14549.1    GDHC01002304    JAQ16325.1    KQ030675    KJZ69826.1    BEHR01000042    GBC93992.1    APWK03000158    PHH49970.1    KK088414    EYE97965.1    JXLN01000115    KPL96863.1    GBHO01033243    GBRD01013098    JAG10361.1    JAG52728.1    FJ897816    FJ897817    ADA68824.1    ADA68825.1    BEZZ01000005    GCC22040.1    CM012457    RVE58050.1    LIRN01000071    KOP25497.1    KK113577    KFM60500.1    ASPP01020743    ETO13217.1    JWZX01001519    KOO33444.1    ABLF02034706    ABLF02034707    APWK03000155    PHH50007.1    APWK03000198    PHH49485.1    CAAE01015004    CAG09333.1    MOOB01000256    OQE62924.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000053268    UP000235965    UP000002358    + More
UP000005203    UP000242457    UP000007266    UP000245037    UP000279307    UP000075881    UP000030742    UP000019118    UP000008237    UP000053097    UP000075920    UP000005205    UP000076502    UP000053454    UP000053825    UP000078492    UP000288716    UP000000311    UP000075882    UP000007062    UP000075840    UP000242188    UP000007755    UP000053105    UP000028760    UP000075809    UP000078540    UP000261480    UP000078541    UP000078542    UP000215902    UP000002852    UP000285301    UP000094527    UP000015104    UP000236332    UP000030746    UP000069272    UP000257200    UP000257160    UP000191691    UP000265180    UP000222788    UP000019804    UP000001038    UP000287033    UP000264800    UP000036831    UP000054359    UP000265200    UP000007819    UP000007303    UP000261540   

PRIDE

H9JCA0   

Pfam

PF00400   WD40        + More
PF04564   U-box
PF10313   DUF2415
PF00536   SAM_1
PF07647   SAM_2
PF08937   DUF1863
PF05729   NACHT
PF17111   Helo_like_N
PF00805   Pentapeptide
PF17100   NACHT_N
PF00931   NB-ARC

Interpro

IPR020472   G-protein_beta_WD-40_rep        + More
IPR019775   WD40_repeat_CS       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR036322   WD40_repeat_dom_sf       
IPR003613   Ubox_domain       
IPR013083   Znf_RING/FYVE/PHD       
IPR011041   Quinoprot_gluc/sorb_DH       
IPR011044   Quino_amine_DH_bsu       
IPR013761   SAM/pointed_sf       
IPR001660   SAM       
IPR019417   DUF2415       
IPR018247   EF_Hand_1_Ca_BS       
IPR036439   Dockerin_dom_sf       
IPR015032   MTH538_TIR-like_domain       
IPR035897   Toll_tir_struct_dom_sf       
IPR011990   TPR-like_helical_dom_sf       
IPR007111   NACHT_NTPase       
IPR027417   P-loop_NTPase       
IPR018391   PQQ_beta_propeller_repeat       
IPR031348   Helo-like_N       
IPR001646   5peptide_repeat       
IPR031359   NACHT_N       
IPR036291   NAD(P)-bd_dom_sf       
IPR017252   Dynein_regulator_LIS1       
IPR016093   MIR_motif       
IPR002182   NB-ARC       
IPR001387   Cro/C1-type_HTH       

SUPFAM

SSF50998   SSF50998        + More
SSF50978   SSF50978       
SSF50952   SSF50952       
SSF50969   SSF50969       
SSF47769   SSF47769       
SSF52200   SSF52200       
SSF48452   SSF48452       
SSF52540   SSF52540       
SSF63446   SSF63446       
SSF51735   SSF51735       

Gene 3D

2.130.10.10     3.30.40.10     1.10.150.50     1.10.1330.10     1.25.40.10     3.40.50.10140    

CDD

cd00093  HTH_XRE

ProteinModelPortal

H9JCA0   A0A2H1VZD1   A0A212ESZ3   A0A194R3G4   A0A194Q3Y1   A0A2J7PVL8   + More
K7JED7   A0A088ASU3   A0A2A3EB02   D6WQH9   A0A2P8YPC2   A0A3L8E2R9   A0A182JPY5   A0A139WF14   A0A139WEW5   U4UJ60   N6U913   E2BYA8   A0A026W0W3   A0A182WKG1   A0A158NNL9   A0A1Y1K1C5   A0A154P760   A0A0L8I9V3   A0A0L7R6X0   A0A195DKV6   A0A2M4CUQ1   A0A1Y1JZX4   A0A443SS77   A0A2M4BMS0   A0A2M3ZHX8   E2A2S2   A0A182LJC4   L7MFN9   A7UTR7   A0A2M4CUY8   A0A131YKE3   A0A182HLV5   A0A224Z851   A0A210QWZ3   F4WQI6   A0A1E1XH47   A0A0N0U3D0   A0A087YI14   A0A151X990   A0A195B344   A0A0C9R8K3   A0A315W8U8   A0A3B3YQW6   A0A195F8A4   A0A195CXN1   A0A2M4AMP7   A0A267GZK6   E9IYY5   M4AAC7   A0A267EIS2   A0A3S3NQR3   D5G209   A0A1D2MFZ2   T1KSH3   A0A2H5WYD4   V4CKW6   A0A147BQ60   A0A182FEI2   A0A131Y150   A0A177Q2R3   X6LPR6   A0A3Q1FV70   A0A0C9VNX5   A0A2G6PBK2   A0A3Q1B8H5   A0A1V6WJB2   X6ML19   A0A3P9JVY8   A0A146MAQ4   A0A0F7ZFW0   A0A2H5WYI2   A0A2C5WW89   A0A017SNX0   H2MQH7   A0A131ZSS8   A0A0A9WSG0   D5G222   A0A401RV60   A0A3Q3B336   A0A437C5Y1   A0A0M0SLX2   A0A087T5W1   A0A3P9IB20   X6MIE6   A0A0M0K3S6   J9JWF4   H3DGE9   A0A3B3RDF6   A0A2C5WVG7   A0A3B3RET7   A0A2C5WT11   Q4RQJ9   A0A1V6WJ40  

PDB

5NNZ     E-value=7.83803e-11,     Score=160

KEGG

101745180    no KO assigned | (RefSeq) vegetative incompatibility protein HET-E-1-like

GO

GO:0004842   GO:0016021   GO:0000272   GO:0016020   GO:0043531   GO:0043565   GO:0005515   GO:0016567   GO:0003676   GO:0015074   GO:0030429   GO:0004003   GO:0005634   GO:0006289   GO:0016286  

Length:

316

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0918399999999999

Exp number, first 60 AAs:

0.00093

Total prob of N-in:

0.01427

outside

1  -  316

 

 

Pi

6.743006

Theta

10.884366

Tajima's D

-0.338992

CLR

0

CSRT

0.285935703214839

Interpretation

Uncertain