Gene

KWMTBOMO12804

Pre Gene Modal

BGIBMGA007216

Annotation

PREDICTED:_lachesin-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr21(+):15246296-15250113      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.849

CDS

ATGAGCCACTTCGTGCAGCTCAACGTTGTAGTGCCAAAGATAGAGATAGTGGGAGAGTCAGACCTGTACGTGAAAGCGGGCAGCACGGTGAGCCTGAAGTGTGTGATCACGCAGGCGCTGGAGGAGCCCGCCTACATCTTCTGGTACCACAACGACGAGCGGGTGCTCAACTACGACCGCTCGCTCGTCGAGATCCGCATGGACCGCGTCGCCCCCGACACCACGATCGGGAACCTCATCATCTACAGCTCCCGGCGCGAGGACTCCGGTAACTACTCGTGCGCGCCCTCCAACCTCGACTCCGCGTCCGTCGTGCTGCACGTGCTCAGTGGAGAGCAGCCGGCCGCGATGCAGCACGGGAACGGAGCCGCCCTGCCCCCCGCGCCGCGCCTCCTCACCCTCCTGCTGGCGCTCGCACTCGCGCTTCTGCTCACATTATTGTGCCACGACGAGGACGAAGGCAAATAG

Protein

MSHFVQLNVVVPKIEIVGESDLYVKAGSTVSLKCVITQALEEPAYIFWYHNDERVLNYDRSLVEIRMDRVAPDTTIGNLIIYSSRREDSGNYSCAPSNLDSASVVLHVLSGEQPAAMQHGNGAALPPAPRLLTLLLALALALLLTLLCHDEDEGK

Similarity

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.

Uniprot

H9JCH1   A0A212ESZ4   A0A2H1VXK4   A0A3S2NUZ6   A0A2W1BLL9   A0A0N1IBH9   + More
A0A2A4K0X5   A0A194QG91   A0A2P8Y0A4   D6W6V0   A0A146LH91   A0A1B6ED63   E0VS95   A0A1B6H5J9   A0A1B6LZX7   N6UFU3   V5GFI4   A0A0J7P221   E2AQ99   E2B3B6   A0A3L8D8N9   A0A158NEN2   U4UP37   A0A026WX57   A0A151XIV7   A0A2A3EQQ4   A0A3R7Q8L8   A0A087ZRJ6   V9IF86   A0A2H8TKW5   A0A0L7RFQ9   A0A2S2NTX0   A0A310S8Q6   A0A2S2QJU3   A0A195CR66   J9K2Y7   A0A1D2MUX9   A0A195FMT8   A0A154PE29   A0A195DZK6   F4WRR9   A0A195BUT3   E9IJB8   A0A2L2YKG3   A0A087UVC2   A0A182UR32   A0A087ULZ4   A0A182G2C5   Q7QHC6   Q170V0   A0A182IPM4   B0W664   A0A182Q144   A0A182XWE7   A0A182UKL6   A0A182IYZ8   A0A0C9RUW2   B4N8M6   A0A182WQJ8   A0A2A4JTJ1   A0A182KL03   E0VQS6   A0A194PDN6   A0A0P8XY70   A0A3Q0J6L2   A0A423T0H9   A0A3S2N9Y3   K7IXN4   A0A2L2YMF2   A0A453YZU5   A0A1S4GDZ4   A0A1W4VNA6   A0A2M4CWF4   K7IXK1   A0A0R1E3I8   A0A1I8PZT7   A0A1B0FBS9   B7QEX2   A0A1S4FHJ2   F5HIW2   A0A0R3NIB1   A0A3B0JMR8   A0A087U434   A0A084WM10   T1J778   A0A182MWG4   A0A182HW92   A0A2P6KWP7   A0A0Q9WGW1   A0A1B6MF60   A0A0Q9XBL8   H9IVK6   B3M587   A0A0C9RUW7   A0A1I8PBP5  

Pubmed

19121390    22118469    28756777    26354079    29403074    18362917    + More
19820115    26823975    20566863    23537049    20798317    30249741    21347285    24508170    27289101    21719571    21282665    26561354    26483478    12364791    17510324    25244985    17994087    20966253    20075255    17550304    15632085    24438588   

EMBL

BABH01031716    BABH01031717    AGBW02012675    OWR44616.1    ODYU01005050    SOQ45553.1    + More
RSAL01000167    RVE45250.1    KZ150044    PZC74524.1    KQ460055    KPJ17982.1    NWSH01000307    PCG77568.1    KQ458981    KPJ04434.1    PYGN01001090    PSN37698.1    KQ971307    EFA11463.1    GDHC01012313    JAQ06316.1    GEDC01001433    JAS35865.1    DS235746    EEB16251.1    GECU01037727    JAS69979.1    GEBQ01010787    JAT29190.1    APGK01036828    APGK01036829    KB740943    ENN77522.1    GALX01005722    JAB62744.1    LBMM01000345    KMR00006.1    GL441701    EFN64433.1    GL445323    EFN89794.1    QOIP01000011    RLU16482.1    ADTU01013562    ADTU01013563    KB632399    ERL94862.1    KK107078    EZA60331.1    KQ982080    KYQ60281.1    KZ288202    PBC33469.1    QCYY01002304    ROT71367.1    JR043132    AEY59730.1    GFXV01002980    MBW14785.1    KQ414606    KOC69551.1    GGMR01007958    MBY20577.1    KQ764228    OAD54574.1    GGMS01008822    MBY78025.1    KQ977381    KYN03130.1    ABLF02026308    ABLF02027813    ABLF02027814    ABLF02027815    ABLF02027816    ABLF02048678    ABLF02056104    ABLF02058470    ABLF02058863    ABLF02066642    LJIJ01000498    ODM96843.1    KQ981490    KYN41239.1    KQ434886    KZC10135.1    KQ979999    KYN18266.1    GL888292    EGI63076.1    KQ976401    KYM92342.1    GL763764    EFZ19333.1    IAAA01034890    LAA08601.1    KK121829    KFM81311.1    KK120493    KFM78383.1    JXUM01039691    JXUM01039692    JXUM01039693    JXUM01039694    JXUM01039695    KQ561214    KXJ79333.1    AAAB01008816    EAA05288.4    CH477467    EAT40480.1    DS231847    EDS36411.1    AXCN02002398    GBYB01012650    JAG82417.1    CH964232    EDW81477.1    NWSH01000633    PCG75139.1    DS235440    EEB15732.1    KQ459606    KPI91128.1    CH902617    KPU79571.1    QCYY01002485    ROT70000.1    RSAL01000161    RVE45401.1    AAZX01000015    AAZX01000039    AAZX01005416    AAZX01007570    AAZX01007787    AAZX01009562    AAZX01012879    AAZX01013757    AAZX01022366    IAAA01038070    IAAA01038071    LAA09292.1    AAAB01008799    GGFL01005421    MBW69599.1    AAZX01000009    AAZX01004642    CM000160    KRK03800.1    CCAG010017875    CCAG010017876    ABJB010333471    DS922399    EEC17394.1    EGK96223.1    CM000070    KRT00744.1    OUUW01000007    SPP83525.1    KK118058    KFM72123.1    ATLV01024348    KE525351    KFB51254.1    JH431915    AXCM01010108    APCN01001477    MWRG01004173    PRD30758.1    CH940650    KRF83821.1    GEBQ01005423    JAT34554.1    CH933806    KRG01336.1    BABH01001301    BABH01001302    CH902618    EDV40592.2    GBYB01012655    JAG82422.1   

Proteomes

UP000005204    UP000007151    UP000283053    UP000053240    UP000218220    UP000053268    + More
UP000245037    UP000007266    UP000009046    UP000019118    UP000036403    UP000000311    UP000008237    UP000279307    UP000005205    UP000030742    UP000053097    UP000075809    UP000242457    UP000283509    UP000005203    UP000053825    UP000078542    UP000007819    UP000094527    UP000078541    UP000076502    UP000078492    UP000007755    UP000078540    UP000054359    UP000075903    UP000069940    UP000249989    UP000007062    UP000008820    UP000075880    UP000002320    UP000075886    UP000076408    UP000075902    UP000007798    UP000075920    UP000075882    UP000007801    UP000079169    UP000002358    UP000192221    UP000002282    UP000095300    UP000092444    UP000001555    UP000001819    UP000268350    UP000030765    UP000075883    UP000075840    UP000008792    UP000009192   

PRIDE

H9JCH1    H9IVK6   

Pfam

PF07686   V-set        + More
PF07679   I-set
PF00047   ig
PF00130   C1_1
PF00620   RhoGAP
PF00063   Myosin_head
PF00612   IQ
PF00788   RA

Interpro

IPR007110   Ig-like_dom        + More
IPR003599   Ig_sub       
IPR013783   Ig-like_fold       
IPR037448   Zig-8       
IPR013106   Ig_V-set       
IPR003598   Ig_sub2       
IPR036179   Ig-like_dom_sf       
IPR013098   Ig_I-set       
IPR013151   Immunoglobulin       
IPR036023   MYSc_Myo9       
IPR008936   Rho_GTPase_activation_prot       
IPR000198   RhoGAP_dom       
IPR000048   IQ_motif_EF-hand-BS       
IPR027417   P-loop_NTPase       
IPR029071   Ubiquitin-like_domsf       
IPR036961   Kinesin_motor_dom_sf       
IPR001609   Myosin_head_motor_dom       
IPR002219   PE/DAG-bd       
IPR000159   RA_dom       

SUPFAM

SSF48726   SSF48726        + More
SSF48350   SSF48350       
SSF54236   SSF54236       
SSF52540   SSF52540       

Gene 3D

2.60.40.10     1.10.555.10     3.40.850.10    

CDD

cd00029  C1
cd01385  MYSc_Myo9

ProteinModelPortal

H9JCH1   A0A212ESZ4   A0A2H1VXK4   A0A3S2NUZ6   A0A2W1BLL9   A0A0N1IBH9   + More
A0A2A4K0X5   A0A194QG91   A0A2P8Y0A4   D6W6V0   A0A146LH91   A0A1B6ED63   E0VS95   A0A1B6H5J9   A0A1B6LZX7   N6UFU3   V5GFI4   A0A0J7P221   E2AQ99   E2B3B6   A0A3L8D8N9   A0A158NEN2   U4UP37   A0A026WX57   A0A151XIV7   A0A2A3EQQ4   A0A3R7Q8L8   A0A087ZRJ6   V9IF86   A0A2H8TKW5   A0A0L7RFQ9   A0A2S2NTX0   A0A310S8Q6   A0A2S2QJU3   A0A195CR66   J9K2Y7   A0A1D2MUX9   A0A195FMT8   A0A154PE29   A0A195DZK6   F4WRR9   A0A195BUT3   E9IJB8   A0A2L2YKG3   A0A087UVC2   A0A182UR32   A0A087ULZ4   A0A182G2C5   Q7QHC6   Q170V0   A0A182IPM4   B0W664   A0A182Q144   A0A182XWE7   A0A182UKL6   A0A182IYZ8   A0A0C9RUW2   B4N8M6   A0A182WQJ8   A0A2A4JTJ1   A0A182KL03   E0VQS6   A0A194PDN6   A0A0P8XY70   A0A3Q0J6L2   A0A423T0H9   A0A3S2N9Y3   K7IXN4   A0A2L2YMF2   A0A453YZU5   A0A1S4GDZ4   A0A1W4VNA6   A0A2M4CWF4   K7IXK1   A0A0R1E3I8   A0A1I8PZT7   A0A1B0FBS9   B7QEX2   A0A1S4FHJ2   F5HIW2   A0A0R3NIB1   A0A3B0JMR8   A0A087U434   A0A084WM10   T1J778   A0A182MWG4   A0A182HW92   A0A2P6KWP7   A0A0Q9WGW1   A0A1B6MF60   A0A0Q9XBL8   H9IVK6   B3M587   A0A0C9RUW7   A0A1I8PBP5  

PDB

6EG0     E-value=1.83584e-11,     Score=161

KEGG

101745031    no KO assigned | (RefSeq) lachesin-like

GO

GO:0050808   GO:0032589   GO:0016021   GO:0005524   GO:0016459   GO:0046872   GO:0003779   GO:0005096   GO:0003774   GO:0035556   GO:0005515   GO:0015074   GO:0006508   GO:0003676   GO:0030429   GO:0004003   GO:0005634   GO:0006289   GO:0016286  

PANTHER

PTHR23279  

Length:

155

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

15.31536

Exp number, first 60 AAs:

0.01044

Total prob of N-in:

0.16109

outside

1  -  155

 

 

Pi

5.409898

Theta

14.9828

Tajima's D

-0.642499

CLR

1.550745

CSRT

0.209839508024599

Interpretation

Uncertain