Gene

KWMTBOMO12793

Annotation

PREDICTED:_probable_mitochondrial-processing_peptidase_subunit_beta_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr21(+):14635195-14637951      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.062

CDS

ATGAAACGGCTATTCAGAATAACAAACCAAAATAGATATGTCTCCACCAGTAGAAGCAGTAAAGGAGCGTGTTGGCCTAGACCAGACTACGGTCCTATGGAGGTCCAAAGGTCGGTCATGATGAATGGCATAAAGGTGGCAGCCGCAAAACCGTTGGGCTCTCAAATTGCTGCTTGCACAATTATGTATCAGGCCGGTTCCCGTTACGAAATCGATGATCAGCTGGGCGCTTCGCACTTTATTCGAGCTGCCTCCTCGGCTACTGGCTGTGGGTACACATCCTTTGCGAAAATGCGTTATCTACAACAAAACGGAGGGAGCATCACTTGCTCGAGCGACAGGCAGAATATATCTTTTACGTTGCGATGTCCCCCCACTGTCTTCAGCGAGCTCAAGAATTATCTACTGGACGTTGCTTCCAGATGCTGCTACCATCCGTGGGAAATAAAAGATCGGAAAACTCTTATTCGTGAAGACTTAGTTCGAATTCATCCTGAACAGAGAGTGATTGATCTAGTCCAAAAGGCTTGCTGGACTGGTCAACTGTCTAACTCTGTGTTCTGCGAAGAAGGCCGGATCGACGAAATGACTGATAACTCACTCAACTGCTTCGCTAGGACTCATTTCAAGAGTAGTCATTGTACAGTCGGAAGCGTTGGCGTACCATTTGAAGAGACATTGAAGTTGGCAGAGAAAATTGAATACAAAAGGGAGATGCCAGAGCAAAGGCAAGAGAAGCAGTCCTGTCCCCGTGGTGGCTTTGAACTCTTCGATCTTGGACGCGACAGCGACACGTGGATTGCCCTGGCAGTTCCTGGATGTGGCACTTGCGACGTTCCGTTAGTACACACACAACTAAAACTATACAACTACTTCAAAAATAAGCCATCGCTAAACAATTTCCTTTCATTTTTATTTGCTGCTAAGTATAAGGTATTATAA

Protein

MKRLFRITNQNRYVSTSRSSKGACWPRPDYGPMEVQRSVMMNGIKVAAAKPLGSQIAACTIMYQAGSRYEIDDQLGASHFIRAASSATGCGYTSFAKMRYLQQNGGSITCSSDRQNISFTLRCPPTVFSELKNYLLDVASRCCYHPWEIKDRKTLIREDLVRIHPEQRVIDLVQKACWTGQLSNSVFCEEGRIDEMTDNSLNCFARTHFKSSHCTVGSVGVPFEETLKLAEKIEYKREMPEQRQEKQSCPRGGFELFDLGRDSDTWIALAVPGCGTCDVPLVHTQLKLYNYFKNKPSLNNFLSFLFAAKYKVL

Similarity

Belongs to the peptidase M16 family.

Uniprot

H9JCG6   A0A2A4JJ05   A0A2W1BJE3   A0A3S2NGB2   A0A2H1V369   A0A212EVP5   + More
A0A0L7LSH7   A0A194QHN1   A0A194RM54   A0A067RNB5   A0A1B6M5G0   A0A2J7QSR8   Q2F640   A0A212FJA3   A0A1B6FJM8   S4NNT6   A0A1B0A355   D3TPJ2   A0A0A1WJZ1   A0A1A9VEB6   A0A1D2N6F3   A0A1W4YYR2   A0A1W4Z7J6   A0A1B0C4J2   A0A1A9XYN3   A0A154P1A3   A0A1A9W7L3   E9H2T2   I4DKE9   A0A194Q1X6   A0A0J7NEG4   A0A437AUK9   A0A026X2Y1   Q7ZTQ8   A0A091MUH2   T1PEF3  

Pubmed

19121390    28756777    22118469    26227816    26354079    24845553    + More
23622113    20353571    25830018    27289101    21292972    22651552    24508170    30249741    25315136   

EMBL

BABH01031654    BABH01031655    NWSH01001396    PCG71382.1    KZ150141    PZC72946.1    + More
RSAL01000117    RVE46816.1    ODYU01000454    SOQ35283.1    AGBW02012143    OWR45570.1    JTDY01000175    KOB78435.1    KQ458981    KPJ04445.1    KQ459995    KPJ18514.1    KK852567    KDR21194.1    GEBQ01008826    JAT31151.1    NEVH01011228    PNF31631.1    BABH01011965    DQ311232    ABD36177.1    AGBW02008299    OWR53790.1    GECZ01019405    JAS50364.1    GAIX01013811    JAA78749.1    CCAG010006947    EZ423344    ADD19620.1    GBXI01015487    JAC98804.1    LJIJ01000184    ODN00848.1    JXJN01025501    KQ434796    KZC05705.1    GL732587    EFX73836.1    AK401767    BAM18389.1    KQ459590    KPI97405.1    LBMM01006112    KMQ90920.1    RSAL01000416    RVE41810.1    KK107020    QOIP01000004    EZA62468.1    RLU23724.1    BC042931    AAH42931.1    KK836976    KFP80347.1    KA647167    AFP61796.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000037510    UP000053268    + More
UP000053240    UP000027135    UP000235965    UP000092445    UP000092444    UP000078200    UP000094527    UP000192224    UP000092460    UP000092443    UP000076502    UP000091820    UP000000305    UP000036403    UP000053097    UP000279307    UP000095301   

PRIDE

H9JCG6    Q2F640   

Pfam

PF00675   Peptidase_M16        + More
PF05193   Peptidase_M16_C

Interpro

IPR013177   DUF1713        + More
IPR011249   Metalloenz_LuxS/M16       
IPR011765   Pept_M16_N       
IPR007863   Peptidase_M16_C       
IPR001431   Pept_M16_Zn_BS       

SUPFAM

SSF63411   SSF63411       

ProteinModelPortal

H9JCG6   A0A2A4JJ05   A0A2W1BJE3   A0A3S2NGB2   A0A2H1V369   A0A212EVP5   + More
A0A0L7LSH7   A0A194QHN1   A0A194RM54   A0A067RNB5   A0A1B6M5G0   A0A2J7QSR8   Q2F640   A0A212FJA3   A0A1B6FJM8   S4NNT6   A0A1B0A355   D3TPJ2   A0A0A1WJZ1   A0A1A9VEB6   A0A1D2N6F3   A0A1W4YYR2   A0A1W4Z7J6   A0A1B0C4J2   A0A1A9XYN3   A0A154P1A3   A0A1A9W7L3   E9H2T2   I4DKE9   A0A194Q1X6   A0A0J7NEG4   A0A437AUK9   A0A026X2Y1   Q7ZTQ8   A0A091MUH2   T1PEF3  

PDB

3BCC     E-value=3.91739e-22,     Score=258

KEGG

101744457    K00415 ubiquinol-cytochrome c reductase core subunit 2 | (RefSeq) cytochrome b-c1 complex subunit 2,

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0046872   GO:0003824   GO:0004222   GO:0006569   GO:0009435   GO:0030170   GO:0030429   GO:0004003   GO:0005634   GO:0006289   GO:0016286  

Length:

313

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.19181

Exp number, first 60 AAs:

0.09046

Total prob of N-in:

0.08997

outside

1  -  313

 

 

Pi

15.667005

Theta

15.417951

Tajima's D

0.087218

CLR

12.437266

CSRT

0.404079796010199

Interpretation

Uncertain