Gene

KWMTBOMO12791  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007210

Annotation

PREDICTED:_ATP-dependent_Clp_protease_ATP-binding_subunit_clpX-like?_mitochondrial_isoform_X3_[Amyelois_transitella]

Location

Bomo_Chr21(+):14599575-14620585      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.236 Nuclear   Reliability : 1.774

CDS

ATGGCCTTACCGGTGGCAAAGCGGAAACCTCCACCTCCGCCAAAGAAGATCTTCGAATATCTGAACAAGCACGTGGTGGGGCAGGAATACGCCAAGAAGGTGCTCTCGGTGGCCGTGTACAATCACTACAAACGCATCTACAACAACGTGACGAGCGGAACTCCGAACGACTCCCATCACCCGCTGCATCACACTCACAGAGATCTGCTACATTTGGGTCACGGAGGCAGCGGCGGTGGAGCGGAAGTATTGGAAAGGCAACACCATGACATCAAACTGGACAAAAGCAACGTACTACTGTTGGGACCCACCGGATGTGGTAAGACGCTGTTAGCACAAACGATAGCCCAGTGCCTGGACGTGCCGTTCGCGATCTGCGACTGCACCACGCTGACGCAGGCCGGCTACGTCGGCGAGGACATCGAGAGTGTCATCGCCAAACTGCTGCAGGACGCTAACTTCAACGTGGAGCGAGCTCAAACGGGGATAGTGTTCCTGGACGAGGTCGACAAAATCGGTGCCGTCCCGGGAATACATCAGCTCAGGGATGTCGGAGGCGAGGGAGTGCAGCAAGGCATGCTGAAGATGCTGGAGGGCGCCGTGGTGTCGGTGCCGGAGAGGAACTCTCGCAAGCTGCGTGGCGATGCGCTCAACGTCGACACCACCAACATCCTGTTCGTGGCCAGCGGCGCCTACAACGGGCTGGACAGGCTGGTGCAGCGGCGCAACAACGAGAAGTACCTGGGGTTCGGCGCGGGCGGCGCGGGCGGCGGCGCGGGGCGGCGGGCGGCGCTGCAGGCCGCGCACAACGACGCCAGCCCGGCCGCCGCGCCGCAGGACGAGGACCGCGAGCGCGACGCCTGGCTGCGCAAGGTGCAGGCCAGGGACCTCATCGACTTCGGCATGATACCGGAGTTTGTCGGGCGCTTCCCCGTGCTCGTGCCCTTCCACAGCCTCAGCCAGGACCTGCTGGTGCGGATCCTGACAGAACCTAAAAACGCGATGGTGGCGCAGTACAAGCTGCTGTTCGCGATGGACAAGTGCGAACTGTCGTTCAGCGACGACGCGCTGCGGGCCGTCGCCGCGCTCGCCATGGAGCGACGCACCGGCGCGCGCGGCCTGCGGGCCATCATGGAAAGTCTTCTGCTGGAGATAATGTTCGAGATCCCGGGGTCGGAGATATCCAGCGTGCACGTGCACGAGGGCTGCGTGTCCCGCGGCGAGCCCCCCCGCACCGCGCGCCGCGCCGCCGCCCCCGCGCCCGCCCCGCGCGACCCGCACCTGCACGACTGGCCCGAGCTCAGGATCACCAACTGTACGTACTGTTACAACCCTAGTGTGAAGAGCCCTAACCAAGCTGCACGATCAGCGTTCCCGAGCCCTCCTGTTCCGTCCGCTCAGCCAACATAA

Protein

MALPVAKRKPPPPPKKIFEYLNKHVVGQEYAKKVLSVAVYNHYKRIYNNVTSGTPNDSHHPLHHTHRDLLHLGHGGSGGGAEVLERQHHDIKLDKSNVLLLGPTGCGKTLLAQTIAQCLDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANFNVERAQTGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKMLEGAVVSVPERNSRKLRGDALNVDTTNILFVASGAYNGLDRLVQRRNNEKYLGFGAGGAGGGAGRRAALQAAHNDASPAAAPQDEDRERDAWLRKVQARDLIDFGMIPEFVGRFPVLVPFHSLSQDLLVRILTEPKNAMVAQYKLLFAMDKCELSFSDDALRAVAALAMERRTGARGLRAIMESLLLEIMFEIPGSEISSVHVHEGCVSRGEPPRTARRAAAPAPAPRDPHLHDWPELRITNCTYCYNPSVKSPNQAARSAFPSPPVPSAQPT

Uniprot

A0A2A4JII0   A0A2A4JH32   A0A2H1V364   A0A194QFX1   A0A212EVP6   A0A2W1BDB6   + More
A0A0M9A6F5   A0A154PSU5   A0A0P5GLK4   A0A147B8V2   A0A2R5LGM9   A0A0P5I0E5   A0A151I4E0   A0A158N9I1   L7M0G7   L7M2K0   E0VRL3   A0A0P5S3L8   A0A131XGR3   A0A1B6D567   A0A087TU49   A0A0P5FU31   A0A0P5I5F1   A0A0P6EA02   A0A0P5S3M1   A0A0P5RY93   A0A0P5K1B9   A0A0P5RJX8   A0A0P5HUD0   A0A0P5JW54   A0A0P6D511   A0A0P5IWS9   A0A0N8CB83   A0A0P5HD23   A0A0P5GY51   A0A0N8C5B0   A0A0P5LVU1   A0A2C9JKK1   A0A0P5EQU7   A0A0P5KPY0   A0A0P5KNN8   A0A0P6EFY2   A0A0P5RW34   A0A0P5RY21   A0A0P5GXW5   A0A0P6EYJ7   A0A0P5ISM0   A0A0P5VR28   A0A0P5X981   A0A0P5L5X7   A0A0P5AKS7   A0A0P4ZND5   A0A1E1X3K1   A0A0P5C5X0   A0A0P5T9P2   A0A0P5SJ64   A0A224YI54   I3M2X9   A0A2C9JKK9   W5LEJ7   A0A131YJZ6   H2Q9L9   A0A2R9C0Z7   A0A3B4BMW0   A0A2K6BJT5   A0A2K5V0Y7   F7HHL5   A0A2Y9K401   A0A0P5JNA1   A0A0P7Z9Z4   A0A0P5JFG1   A0A0P6FW94   A0A1U7QMZ9   A0A2Y9NK87   A0A2K5NI46   F1SJL5   A0A383YTG9   A0A452FV43   V5I522   A0A2K6PN89   A0A2K5HY01   A0A0B7B8S8   A0A0P5RTR5   A0A0P6H5W5   A0A3L7HV47   A0A2K6PN40   A0A0P5NTI3   A0A2K6PN46   A0A2K5HY84   A0A452HAT2   A0A2K5HY54   H0V0S0   A0A2H6N419   A0A0P5K5I4   A0A2U3Z5M0   M7BV10   A0A1W5AZ15   G1RQ25   Q4V866   A0A1L8H1C6  

Pubmed

26354079    22118469    28756777    21347285    25576852    20566863    + More
28049606    15562597    28503490    28797301    25329095    26830274    16136131    22722832    17431167    30723633    25765539    25362486    29704459    28562605    21993624    23624526    27762356   

EMBL

NWSH01001396    PCG71384.1    PCG71385.1    ODYU01000454    SOQ35285.1    KQ458981    + More
KPJ04448.1    AGBW02012143    OWR45568.1    KZ150141    PZC72948.1    KQ435737    KOX76893.1    KQ435066    KZC14328.1    GDIQ01240749    JAK10976.1    GEIB01001417    JAR86815.1    GGLE01004557    MBY08683.1    GDIQ01220200    JAK31525.1    KQ976461    KYM84712.1    ADTU01009655    GACK01007667    JAA57367.1    GACK01007666    JAA57368.1    DS235478    EEB16019.1    GDIQ01092837    JAL58889.1    GEFH01002278    JAP66303.1    GEDC01016456    JAS20842.1    KK116737    KFM68638.1    GDIQ01250289    JAK01436.1    GDIQ01223198    JAK28527.1    GDIQ01065655    JAN29082.1    GDIQ01092838    JAL58888.1    GDIQ01099696    JAL52030.1    GDIQ01216848    JAK34877.1    GDIQ01099697    JAL52029.1    GDIQ01223197    JAK28528.1    GDIQ01198161    GDIQ01166483    GDIQ01050312    JAK53564.1    GDIQ01082685    JAN12052.1    GDIQ01206656    JAK45069.1    GDIQ01096795    JAL54931.1    GDIQ01235449    JAK16276.1    GDIQ01235448    JAK16277.1    GDIQ01113379    JAL38347.1    GDIQ01188898    JAK62827.1    GDIQ01266116    JAJ85608.1    GDIQ01182319    JAK69406.1    GDIQ01188900    JAK62825.1    GDIQ01064251    JAN30486.1    GDIQ01113378    JAL38348.1    GDIQ01094985    JAL56741.1    GDIQ01234295    JAK17430.1    GDIQ01068502    JAN26235.1    GDIQ01234293    JAK17432.1    GDIP01096600    JAM07115.1    GDIP01087606    JAM16109.1    GDIQ01174504    JAK77221.1    GDIP01211333    JAJ12069.1    GDIP01210230    JAJ13172.1    GFAC01005338    JAT93850.1    GDIP01179332    JAJ44070.1    GDIQ01094983    JAL56743.1    GDIQ01094984    JAL56742.1    GFPF01006201    MAA17347.1    AGTP01003211    AGTP01003212    AGTP01003213    GEDV01009290    JAP79267.1    AACZ04064621    AJFE02098759    AJFE02098760    AJFE02098761    AJFE02098762    AJFE02098763    AQIA01063011    AQIA01063012    AQIA01063013    JSUE03038534    JSUE03038535    GDIQ01200761    JAK50964.1    JARO02000728    KPP77589.1    GDIQ01200760    JAK50965.1    GDIQ01043457    JAN51280.1    AEMK02000004    DQIR01223145    DQIR01262373    DQIR01310459    HDB78622.1    LWLT01000010    GANP01000735    JAB83733.1    HACG01041587    HACG01041590    CEK88452.1    CEK88455.1    GDIQ01096796    GDIQ01050313    JAL54930.1    GDIQ01045616    JAN49121.1    RAZU01000152    RLQ69221.1    GDIQ01142130    JAL09596.1    AAKN02051087    AAKN02051088    IACI01047124    LAA24099.1    GDIQ01188901    JAK62824.1    KB486406    EMP41671.1    ADFV01035763    ADFV01035764    ADFV01035765    ADFV01035766    ADFV01035767    BC097522    AAH97522.1    CM004470    OCT89811.1   

Proteomes

UP000218220    UP000053268    UP000007151    UP000053105    UP000076502    UP000078540    + More
UP000005205    UP000009046    UP000054359    UP000076420    UP000005215    UP000018467    UP000002277    UP000240080    UP000261440    UP000233120    UP000233100    UP000006718    UP000248482    UP000034805    UP000189706    UP000248483    UP000233060    UP000008227    UP000261681    UP000291000    UP000233200    UP000233080    UP000273346    UP000291020    UP000005447    UP000245341    UP000031443    UP000192224    UP000001073    UP000186698   

PRIDE

F1SJL5   

Pfam

PF10431   ClpB_D2-small        + More
PF07724   AAA_2

Interpro

IPR027417   P-loop_NTPase        + More
IPR019489   Clp_ATPase_C       
IPR003959   ATPase_AAA_core       
IPR004487   Clp_protease_ATP-bd_su_ClpX       
IPR003593   AAA+_ATPase       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

A0A2A4JII0   A0A2A4JH32   A0A2H1V364   A0A194QFX1   A0A212EVP6   A0A2W1BDB6   + More
A0A0M9A6F5   A0A154PSU5   A0A0P5GLK4   A0A147B8V2   A0A2R5LGM9   A0A0P5I0E5   A0A151I4E0   A0A158N9I1   L7M0G7   L7M2K0   E0VRL3   A0A0P5S3L8   A0A131XGR3   A0A1B6D567   A0A087TU49   A0A0P5FU31   A0A0P5I5F1   A0A0P6EA02   A0A0P5S3M1   A0A0P5RY93   A0A0P5K1B9   A0A0P5RJX8   A0A0P5HUD0   A0A0P5JW54   A0A0P6D511   A0A0P5IWS9   A0A0N8CB83   A0A0P5HD23   A0A0P5GY51   A0A0N8C5B0   A0A0P5LVU1   A0A2C9JKK1   A0A0P5EQU7   A0A0P5KPY0   A0A0P5KNN8   A0A0P6EFY2   A0A0P5RW34   A0A0P5RY21   A0A0P5GXW5   A0A0P6EYJ7   A0A0P5ISM0   A0A0P5VR28   A0A0P5X981   A0A0P5L5X7   A0A0P5AKS7   A0A0P4ZND5   A0A1E1X3K1   A0A0P5C5X0   A0A0P5T9P2   A0A0P5SJ64   A0A224YI54   I3M2X9   A0A2C9JKK9   W5LEJ7   A0A131YJZ6   H2Q9L9   A0A2R9C0Z7   A0A3B4BMW0   A0A2K6BJT5   A0A2K5V0Y7   F7HHL5   A0A2Y9K401   A0A0P5JNA1   A0A0P7Z9Z4   A0A0P5JFG1   A0A0P6FW94   A0A1U7QMZ9   A0A2Y9NK87   A0A2K5NI46   F1SJL5   A0A383YTG9   A0A452FV43   V5I522   A0A2K6PN89   A0A2K5HY01   A0A0B7B8S8   A0A0P5RTR5   A0A0P6H5W5   A0A3L7HV47   A0A2K6PN40   A0A0P5NTI3   A0A2K6PN46   A0A2K5HY84   A0A452HAT2   A0A2K5HY54   H0V0S0   A0A2H6N419   A0A0P5K5I4   A0A2U3Z5M0   M7BV10   A0A1W5AZ15   G1RQ25   Q4V866   A0A1L8H1C6  

PDB

1UM8     E-value=5.11941e-80,     Score=759

KEGG

101741058    K03544 ATP-dependent Clp protease ATP-binding subunit ClpX | (RefSeq) ATP-dependent Clp protease ATP

GO

GO:0051082   GO:0005524   GO:0006457   GO:0008233   GO:0016021   GO:0005759   GO:0030163   GO:0004176   GO:0046034   GO:0009841   GO:0042645   GO:0051603   GO:0016504   GO:0005829   GO:0005654   GO:0004190   GO:0006508   GO:0015074   GO:0007264   GO:0048015   GO:0004003   GO:0005634   GO:0006289   GO:0016286  

PANTHER

PTHR11262  

Length:

469

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02566

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00429

outside

1  -  469

 

 

Pi

28.843132

Theta

24.932934

Tajima's D

-1.548942

CLR

0.754033

CSRT

0.0525973701314934

Interpretation

Uncertain