Gene

KWMTBOMO12790  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007210

Annotation

PREDICTED:_ATP-dependent_Clp_protease_ATP-binding_subunit_clpX-like?_mitochondrial_[Papilio_polytes]

Location

Bomo_Chr21(+):14574275-14594567      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.898

CDS

ATGAGTAGTGTAAGATTAAGTTTTGTGTCCGTGGGAAGGCTAGCGGTGAGAAGAAACCCACAGATAACATCAGGTGTCCAGCAGTGTCGCTCCCTCAGACGCACGTGCACCAGAGCGCTCGGTACCTGCACAGTACTATGCAAGAGTCCAACAGAACAGCCTCCGGCGCCTCCGCCATCTAACTCAGGGAAAGATGCCGCTGCCTCAGGCACATCGGGTGGAAAAAAGTCTGGCAACGGTGGTAACGGAGTACTGACATGTCCGAAATGCGGAGACCCCTGTACGCACGTCGAGACCTTCGTGAGTTCGACGCGTTTCGTGAAGTGCGACAAGTGCCACCATTTCTTCGTGGTTCTCAGTGAAGTGGACACCAAGAAGAGTATTAAAGATAGTACAGACAACAAATCAGGGTTCTACAGGTAA

Protein

MSSVRLSFVSVGRLAVRRNPQITSGVQQCRSLRRTCTRALGTCTVLCKSPTEQPPAPPPSNSGKDAAASGTSGGKKSGNGGNGVLTCPKCGDPCTHVETFVSSTRFVKCDKCHHFFVVLSEVDTKKSIKDSTDNKSGFYR

Uniprot

A0A2A4JII0   A0A2H1V364   A0A212EVP6   A0A194RLT8   A0A437B8H6   A0A194QFX1   + More
A0A154PSU5   A0A139WNK6   A0A067R4G2   A0A026WE50   A0A0L7QMX7   A0A0J7L461   E9IW52   V9IFV0   F4X482   K7IZU5   A0A232FEX7   A0A151II09   J3JXP3   N6UTC3   E2BNR5   V5GRJ9   A0A1Y1KKH9   A0A1Y1KK16   A0A151XGM5  

Pubmed

22118469    26354079    18362917    19820115    24845553    24508170    + More
21282665    21719571    20075255    28648823    22516182    23537049    20798317    28004739   

EMBL

NWSH01001396    PCG71384.1    ODYU01000454    SOQ35285.1    AGBW02012143    OWR45568.1    + More
KQ459995    KPJ18512.1    RSAL01000117    RVE46817.1    KQ458981    KPJ04448.1    KQ435066    KZC14328.1    KQ971311    KYB29493.1    KK852756    KDR17084.1    KK107260    EZA54198.1    KQ414868    KOC59975.1    LBMM01000816    KMQ97421.1    GL766449    EFZ15206.1    JR040561    JR040562    AEY59183.1    AEY59184.1    GL888628    EGI58750.1    NNAY01000309    OXU29311.1    KQ977545    KYN02034.1    BT128013    AEE62975.1    APGK01016968    KB739995    KB630343    KB631518    ENN82007.1    ERL83542.1    ERL84345.1    GL449444    EFN82674.1    GALX01004219    JAB64247.1    GEZM01083903    JAV60961.1    GEZM01083905    JAV60958.1    KQ982169    KYQ59461.1   

Proteomes

UP000218220    UP000007151    UP000053240    UP000283053    UP000053268    UP000076502    + More
UP000007266    UP000027135    UP000053097    UP000053825    UP000036403    UP000007755    UP000002358    UP000215335    UP000078542    UP000019118    UP000030742    UP000008237    UP000075809   

Pfam

PF10431   ClpB_D2-small        + More
PF07724   AAA_2

Interpro

IPR027417   P-loop_NTPase        + More
IPR019489   Clp_ATPase_C       
IPR003959   ATPase_AAA_core       
IPR004487   Clp_protease_ATP-bd_su_ClpX       
IPR003593   AAA+_ATPase       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

A0A2A4JII0   A0A2H1V364   A0A212EVP6   A0A194RLT8   A0A437B8H6   A0A194QFX1   + More
A0A154PSU5   A0A139WNK6   A0A067R4G2   A0A026WE50   A0A0L7QMX7   A0A0J7L461   E9IW52   V9IFV0   F4X482   K7IZU5   A0A232FEX7   A0A151II09   J3JXP3   N6UTC3   E2BNR5   V5GRJ9   A0A1Y1KKH9   A0A1Y1KK16   A0A151XGM5  

KEGG

101741058    K03544 ATP-dependent Clp protease ATP-binding subunit ClpX | (RefSeq) ATP-dependent Clp protease ATP

GO

GO:0051082   GO:0005524   GO:0006457   GO:0008233   GO:0005759   GO:0030163   GO:0016021   GO:0004176  

PANTHER

PTHR11262  

Length:

140

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.08866

outside

1  -  140

 

 

Pi

21.191124

Theta

23.187413

Tajima's D

-0.676406

CLR

10.852803

CSRT

0.202689865506725

Interpretation

Uncertain