Silkworm Genome Informatics Database

Gene

KWMTBOMO12785

Pre Gene Modal

BGIBMGA001193

Annotation

PREDICTED:_uncharacterized_protein_LOC106135401_[Amyelois_transitella]

Location

Bomo_Chr21(-):14491877-14512554 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.235

CDS

ATGCATAAAGACAGCCAGATACAGCCGTCGATACTGCCTCGGGTGCCGTGTGCTGTAACTGCTGATGCTCATTCACAAACCCAGAGTGTTATCCATACTCTGGACGATTTGGCATCTTACAAAAATAAAATTCCTGTGCTTAAGCACATCCCTAAGGGGGCCAGGAATTTAGTCGCAGGAAAGCTCAGAGTGATTATGGACGGCTGCATAAACAATAACGGTGTGGCGGACTGGGTTTCCTTGTTGTCATTTTCTTACACGACTCTGAGAATTCCAGATCGAGGTGACCCCCGTTCGCTTACTGCAAAGGTTAAGGAGAATGCAAACAATAATAGCCCGTATTTTTTAGAGGACTTCAAACACAAGCCACGATCCATTGTCAAAAGAATCGAAGCCAAGGTTCATGAGGGTGATTTGCGTGGAGCTGTCCGTCTTTTAGTGTCGGAGGATTCTTTAGCACCTTTTAACGATGAGACCTTAAGCGCATTACGTGATAAACATCCTACTCCTTTTCGTCCCTTATCATTGCCGCCAGCGCCTGATTCTAGTTGCCCTTTTTTGACTGTCAACTCGGAGGATGTTGCAGACGCAATTAGTTCCTTTTATAGCGGCTCTGCACCTGGCCTTGATGGTCTACGTCCAAACCATTTAAAGGAGCTCATTTCCCCTTCCGCCGGTGAAAATGGTGTTCGTCTATTGCACTCAATTACAGACTTATGCAATTTCATACTAAGAGGTACGGTTAATGTACAGGTGTGTCCTTATTTGTACGGAGGTAGCTTATGCGCTCTAACTAAGAAGGACGGCGGTGTGAGACCAATTGCGGTGGGGTCTGTGCTGCGTCGTCTCGCTGCCAAGCTTGGGTGTCGGTCTGTAAGGAATGAAATGGCCTCGTACTTGCAGCCCCACCAGCTGGGCTTCGGGACTGCTCTTGGGTGTGAGGCCGCCATTCATGCTACCCGTGCATTTGCTATGAGCAGGGAGAGCTGTAACAGTGCAATTGTAAAGCTTGATATAAGGAATGCTTTTAATAGCTTAGAGAGAGATATAATTTTAAATGAAATCAAGGAAAAGATTCCGGCTTTATACCCATTCTTGTATCAGTGTTACAGCTCTTCCAGCAAGTTATTCTTTATGGAATCTTCCATTGACTCAGAGGTAGGTGCCCAGCAGGGCGATCCTCTTGGCCCATTAATTTTTAGTCTTGCTATCCACAGCATTATAAAGACCGTCAAGTCACCTTTAAACCTATGGTATTTAGATGACGGCACAATAGGTGGTCCCCCAGATTCCGTGCTAGACGACATCAGACTTTTATTTCCGAAGTTGCGAGATGTCGGCTTGGAGGTTAATACTGGGAAATGTGAGGTATACTTTTCTACTGAAGTATCAGCAAGCGTAGTTAATGATTTTCAGGAGTTGGTTCCAGGTATCAAAGTTTTGAATAAAAGTAATTTCATTTTGCTTGGTACTCCAATATTTCAGGATGGAGTTCCAAGTTCTCTGGAAATAAAAAGGCAGTTATTGTCGTCATTGCGCGGCAACCTATTGAGCTTATCATCTCACGTGGCTCTCGTCTTGCTTCGTTGTTGCTTTTCGATGCCTCGTTTGACGTATTTGGTGAGAACTTGTCCAACGTGGCTTTTCACTCAAGATGTGGCCCAGCTTGATGCTTTGTTGAGGGATACACTGGAGGCTATTTTAAACGTAAGCTTGGATGACAGACAATGGTGCCAGGCTGTTTTACCTATACGTCATGGCGGCCTGGGGGTGCGACAGATGGAGCGTACTGGGCTCGCTGCTTTCCTGGCTTCGTGTTATGGAGTTGTAGACTTTGTTGCTAAGTTACTGGCTAGAAAGAAACCGAATTTGAAGGTTAAAATCCCTTCATACCCACACGATTATGTCGCCATGCCCCCGGAGACCAGACGGCTTATTCTGGAAGCCAATCGCACACCAAACGACATCAGATACATTGACGACATCAGTCCAAACACGTCCAGGACCAGTTTGGAAGCCAGCATACCCGATGACAGAAGACCTATGACACCTGAAATTAAAATTAGTGAACCTAAAAATGGGGAAGAAGCCAAGGCAGACGGCTTATCCGGCGACAGTCCGGTCGTGTACACGAACCGGTTAAAACGCGGCTCCGTCTCTGTACCGGAAGGTCTCAAGAGCTATGATGCTCCCAAAAAAGAATATTTGAATCATCCTTTACATATAATAAGGCTAATTGTCGAAAACATTGCAATGGATAACGAATCTAAGTTCAATGCGATAGCGCATAAATTCAAATATCGGTCTCCGTTGTGGATTGAGTCGGATTCGGACATCAGTGGCAGCTCAGACGGGGTCCAAGGCATCTGCAGTGACGATAGCTCATGCAACAGTGGAAGCTCCGGAAGCGTCAACAACTACTTGGACTCTGAGATCCCGGATCACCATCGGAGCTCAGCGTCGGCGTTCAGTGACGGAGACAACACAGTGGACGAAAACAATGGAATTCTCTCGGACGATGATAAGCCGAAGTGA

Protein

MHKDSQIQPSILPRVPCAVTADAHSQTQSVIHTLDDLASYKNKIPVLKHIPKGARNLVAGKLRVIMDGCINNNGVADWVSLLSFSYTTLRIPDRGDPRSLTAKVKENANNNSPYFLEDFKHKPRSIVKRIEAKVHEGDLRGAVRLLVSEDSLAPFNDETLSALRDKHPTPFRPLSLPPAPDSSCPFLTVNSEDVADAISSFYSGSAPGLDGLRPNHLKELISPSAGENGVRLLHSITDLCNFILRGTVNVQVCPYLYGGSLCALTKKDGGVRPIAVGSVLRRLAAKLGCRSVRNEMASYLQPHQLGFGTALGCEAAIHATRAFAMSRESCNSAIVKLDIRNAFNSLERDIILNEIKEKIPALYPFLYQCYSSSSKLFFMESSIDSEVGAQQGDPLGPLIFSLAIHSIIKTVKSPLNLWYLDDGTIGGPPDSVLDDIRLLFPKLRDVGLEVNTGKCEVYFSTEVSASVVNDFQELVPGIKVLNKSNFILLGTPIFQDGVPSSLEIKRQLLSSLRGNLLSLSSHVALVLLRCCFSMPRLTYLVRTCPTWLFTQDVAQLDALLRDTLEAILNVSLDDRQWCQAVLPIRHGGLGVRQMERTGLAAFLASCYGVVDFVAKLLARKKPNLKVKIPSYPHDYVAMPPETRRLILEANRTPNDIRYIDDISPNTSRTSLEASIPDDRRPMTPEIKISEPKNGEEAKADGLSGDSPVVYTNRLKRGSVSVPEGLKSYDAPKKEYLNHPLHIIRLIVENIAMDNESKFNAIAHKFKYRSPLWIESDSDISGSSDGVQGICSDDSSCNSGSSGSVNNYLDSEIPDHHRSSASAFSDGDNTVDENNGILSDDDKPK

Similarity

Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.

Uniprot

A0A194R3A6 A0A226DSQ4 A0A226ENY2 A0A1D1V0I0 A0A226F2H2 A0A1Y1MJ73 + More
A0A226D463 A0A1X7SSY7 A0A251UV27 A0A251U8Z7 A0A1Q9C9N2 A0A1Q9DL84 A0A1Q9EUR7 A0A1Q9CLQ1 X6LZW2 X6NKH2 A0A251SLN7 X6LZS6 X6P981

Pubmed

26354079 27649274 28004739 28538728 24332546

EMBL

KQ460779 KPJ12288.1 LNIX01000012 OXA48253.1 LNIX01000003 OXA58286.1 + More
BDGG01000002 GAU92213.1 LNIX01000001 OXA63637.1 GEZM01032301 JAV84680.1 LNIX01000038 OXA39608.1 CM007893 OTG26899.1 CM007897 OTG19252.1 LSRX01001462 OLP79640.1 LSRX01000486 OLP95909.1 LSRX01000064 OLQ11161.1 LSRX01001088 OLP83851.1 ASPP01026421 ETO07174.1 ASPP01007617 ETO26815.1 CM007903 OTF99774.1 ASPP01027314 ETO06245.1 ASPP01002783 ETO34197.1

Proteomes

UP000053240 UP000198287 UP000186922 UP000007879 UP000215914

Pfam

PF00078   RVT_1        + More
PF00628   PHD
PF02257   RFX_DNA_binding
PF00858   ASC
PF03184   DDE_1

Interpro

IPR000477   RT_dom        + More
IPR036388   WH-like_DNA-bd_sf
IPR011011   Znf_FYVE_PHD
IPR013083   Znf_RING/FYVE/PHD
IPR001965   Znf_PHD
IPR019787   Znf_PHD-finger
IPR019786   Zinc_finger_PHD-type_CS
IPR003150   DNA-bd_RFX
IPR001873   ENaC
IPR004875   DDE_SF_endonuclease_dom
IPR020903   ENaC_CS
IPR036390   WH_DNA-bd_sf
IPR004263   Exostosin
IPR013087   Znf_C2H2_type

SUPFAM

SSF57903 SSF57903 + More
SSF46785 SSF46785

Gene 3D

1.10.10.10 3.30.40.10

ProteinModelPortal

A0A194R3A6 A0A226DSQ4 A0A226ENY2 A0A1D1V0I0 A0A226F2H2 A0A1Y1MJ73 + More
A0A226D463 A0A1X7SSY7 A0A251UV27 A0A251U8Z7 A0A1Q9C9N2 A0A1Q9DL84 A0A1Q9EUR7 A0A1Q9CLQ1 X6LZW2 X6NKH2 A0A251SLN7 X6LZS6 X6P981

KEGG

101744314 no KO assigned | (RefSeq) uncharacterized family 31 glucosidase KIAA1161

GO

GO:0046872 GO:0016301 GO:0006355 GO:0003677 GO:0003676 GO:0005272 GO:0016021 GO:0003964

PANTHER

PTHR11690 PTHR11062

Length:

844

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.83211

Exp number, first 60 AAs:

7e-05

Total prob of N-in:

0.00168

outside

1 - 844

Pi

17.495446

Theta

18.841386

Tajima's D

-0.58035

CLR

0.836733

CSRT

0.221888905554722

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics