SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12775
Pre Gene Modal
BGIBMGA007206
Annotation
PREDICTED:_uncharacterized_protein_LOC101740271_isoform_X3_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.93
 

Sequence

CDS
ATGGCAGATCCTAGAATTCGTCAAATTAAAATCAAGACGGGCGTCGTGAAACGGATTGCCAAGGAAAAAGTAGTCTACGAGAAGGAAGCAGAGCTACAGAAGAATAGAATTCAAAGAATAAAAGACGAAGGGCAAGACGAGCACAACATTCGGAAGCAAGAAGAGGTTCTTCAGGAGTCCCTGATGATGGTCCCAGACTGTCAAAGGAGATTAATCAAAGCATATACAGATCTCAAAACTACTTTAGAAACAGAACAGGACCTCAAAGAACACGAGGAATACATTACCGCTGAACAGGAGCATCATTGGAATTTCCTGATAGCAGATACCCATAATGACATAGACACCATCGAGAGGCTTATGGAAGATATAATTTCTTGTGATATTGATGCTCTAAGAAAATCCCAACTTAAAAGGAAGGGTAAAAGATTACGAATAAGAAGAGCAAAGCTGGAGATGAAAGCAGAGATATTACAGATAGAAAAAGACAGGCAGGAAAGATCAAGAAAGATTGATGAGAATTTGCAGAAAATTAAAGATGAAATAGACAGAGTTAAACAGGAGGAAGAGGCAAAACTCCAGGCAGATGTGGTGCTCAGGGATGTTCTCCGTAAAAAGCAGGATGCCAAAAAATGCTTGACCAAGTTGGATACATTGGTGAAACTTCGTGTAGCAAGGCAGAACACTGCTAAAGGAAGAGGAAGGATTGTATCTTGTAATGAAATGCTACATTTTAGTTCTCAGATTGAGTCACTCAAATCTCTATGGTCAAATAAACTATCTAAATACGAAACAGAAGAAGCGGAACTGCGTGAGAAACTGAATAAAGAAACTAAAAAATTCATTTTACCTTTAGAGGAGGCCACAAATAAAATTGAACAGAATTTGTTACAATGGCAACATTTGCTCTTTGGGGGACAACCCCCACAAGTGGATTTCAATGGAAATATTTATAAATTTATAAAAACCAGAGTCCAATGGGATCAGTATTTGAGTCAAGACGGTAAATCACTACCAACTGGATGGGTTGTGCCCAATCCGAGTATTTAG
Protein
MADPRIRQIKIKTGVVKRIAKEKVVYEKEAELQKNRIQRIKDEGQDEHNIRKQEEVLQESLMMVPDCQRRLIKAYTDLKTTLETEQDLKEHEEYITAEQEHHWNFLIADTHNDIDTIERLMEDIISCDIDALRKSQLKRKGKRLRIRRAKLEMKAEILQIEKDRQERSRKIDENLQKIKDEIDRVKQEEEAKLQADVVLRDVLRKKQDAKKCLTKLDTLVKLRVARQNTAKGRGRIVSCNEMLHFSSQIESLKSLWSNKLSKYETEEAELREKLNKETKKFILPLEEATNKIEQNLLQWQHLLFGGQPPQVDFNGNIYKFIKTRVQWDQYLSQDGKSLPTGWVVPNPSI

Summary

Pfam
PF16021   PDCD7        + More
PF02970   TBCA
Interpro
IPR031974   PDCD7        + More
IPR036126   TBCA_sf       
IPR004226   TBCA       
SUPFAM
SSF46988   SSF46988       
PDB
1H7C     E-value=8.4614e-15,     Score=195

Ontologies

Topology

Length:
349
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.04920
outside
1  -  349
 
 

Population Genetic Test Statistics

Pi
18.881502
Theta
18.184936
Tajima's D
-0.548095
CLR
0.645663
CSRT
0.230088495575221
Interpretation
Uncertain
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