SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12773
Pre Gene Modal
BGIBMGA007204
Annotation
PREDICTED:_uncharacterized_protein_LOC101740131_isoform_X1_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.787
 

Sequence

CDS
ATGATTGCCAAAGAAACTAGTGATCACGAAAACTCTTCTAAATCCAATTTACAGAACGGTAATGAAATTAATGCAGATGGAGATTCAACGCATATAGATCACGATGAACATAAAGATGAAAAAAAAGTTGACACGTCCCATTACACAAAGAAAGAACCAATAGAATCGCCAGTCGAAAGAGTAAAGTTCGTGGGCATTGATGATGATGATGACGACGAAGACAGTTTTTATTCCGAGGAGTCATTCCAGAAAAAACTGCCTCCTATACCTGATGGGGGCTGGGGATGGGTGGTCGTTGCCTCTGCCTTCCTCGTATCCGCCTGTGTTGATGGTCTCGCTTTCTCGTTCGGACTCCTGCACGAAGAGTTCACAAGATATTTCGAAACGACACAATCTCAAACATCATTAATAGGAAGTCTATTTATAGCTACTCCACTGTTAGCCGGGCCAATAGCTAGCGCTATAGTAGACAGATTCGGGTGCAGAGTGATGACTATTATTGCCGGATTACTATCGACGATAGGATTTTTGTTAGCAGCGATTAGTAATTCAGTGTTGGTGTTATCTTTAACATTTGGTCTTCTCAGTGGCCTGGCCATGAGCATTCTCTACGTTACATCAGTAGTGGCTGTAGCGTTTTGGTTTGACAAAAGAAGGAACCTCGCTGTTTCACTGGCTTTGTGTGGAATGGGTTTCGGGACGGTGATTTATTCGCCGCTTACTCATTATTTTCTCCAAGTTTACGATTGGAGGAACACCGTAGTGCTACTTGCCGGTACATTATTGAATATGTGCGTTTGTGGGGCGCTGATGAGAAACCCTGAGTGGTTGGAAATTAAACAGAGAAGAGAGCGCAGGGTTGCTAAGGCGCGGTCGAAAAAGTCGTCAAGTGTCGCTTCATTGTCGTCGAGGTCTTTCGGAGAGGATTCGGAGTATCTGGGAGCGGAAGAACTGAAATCTCTGTTGCAGAGCGGCCAAAGTCCCGAATACATATTGGCGACGTTAGCGACAAGTATAGTCGAAGCTGAAAAATTGGAAGCCACGACTATGATGAACGCTGAACAAACATTCAAGAGAAATTATTCAGCGATACATTTGCCTACATTCATATTGCAGAACGAAATGGTCCCATCAGAAGTAATTGAAAAATTAATGGAAAACAAGAACCTATACAACATTGTCTTACAAAATTACCCAGATTCTATAACACGAAGGAAATCCGAGCTCAATGTTAATGTAGAAACTCCATCTACGAACATTGTTACAGAACCAGCGAAACAACACGTTGAGATAAAAGTTAAAAAACCTAAACATACACAAACAGAAAACGAGAAGCTTGAAGAAAAGAAAACTGTAGAAAGAAAGAAAAGTGTCGAAGTTAAAACAAAAATTCAGGGAACAGATGACAATGCCAAAAATAAAACTAATAAAGATGCGAAGTTACACGCGCAGCCTAGTTGGCTATGGCAAATCTCGACCGATCATCAGTACCTGCGAGACATGCCTTTGTATAGAAAAAAAATTATGCACCGCGGAGCCATGCTGAGTATTCCTAGATACAGACTGAGAGCGTCCTCTTTACCGGACATGTACAGGAACTCCATGTGGTCTTTTGAATCTGACTCGGATGATGAAATGGAATGGTACCACCGATTTTGGCAATCGACCAAAAACATGTTCGACTTCAGAATGCTGATGGAGCTACATTTCTTCTTGTTAAATTTGTCGTCAATGATACTGTCCGTGTGGTTCATCGTGCCGTACTTCTTCCTCAACTCTTACATGAAAGATTATAACGTCGAAGGCGGCGCTACTATGATCAGTATCATTGGAGTCGCCAGCAGCATTGGAATCGTAGCCCTCGGCTGGACTGGTGATCAACCGTGGGTCAACGTCACCAAAACCTACGCAATTTGCCTCATCGTCTGCGGTGTGTCCGTTGCCGCGTACCCCCTCTTCATCACCAACTATTGGATGCTATCCGTCATCTCCGCAGTCTTTGGGGTCACCTTCGCCAGCACGTATTCGTACACTCCAGCCATTCTAATGGAGCTGCTGCCGGTCGAGAACTTTACTGTGGGGTACGGCCTCATCCTGCTCAACGAAGGGATCGGTCACCTTATAGGACCACCGATCGGAGGGCTCCTCTACGACTTGACCGGAACCTGGGATCTGACGTTCTACATGGGCGGTCTGTGGATAGTCATCTCGGGGCTGTGCGTGGGGCTCGTGGACTTCACCAGAAACCGGCAGATGTGCGGAAGCGCTCCGCTACTGAAGGAGGCTGCCGCTTCGGACGGAGACGACAGCTCCGAAGAGTGA
Protein
MIAKETSDHENSSKSNLQNGNEINADGDSTHIDHDEHKDEKKVDTSHYTKKEPIESPVERVKFVGIDDDDDDEDSFYSEESFQKKLPPIPDGGWGWVVVASAFLVSACVDGLAFSFGLLHEEFTRYFETTQSQTSLIGSLFIATPLLAGPIASAIVDRFGCRVMTIIAGLLSTIGFLLAAISNSVLVLSLTFGLLSGLAMSILYVTSVVAVAFWFDKRRNLAVSLALCGMGFGTVIYSPLTHYFLQVYDWRNTVVLLAGTLLNMCVCGALMRNPEWLEIKQRRERRVAKARSKKSSSVASLSSRSFGEDSEYLGAEELKSLLQSGQSPEYILATLATSIVEAEKLEATTMMNAEQTFKRNYSAIHLPTFILQNEMVPSEVIEKLMENKNLYNIVLQNYPDSITRRKSELNVNVETPSTNIVTEPAKQHVEIKVKKPKHTQTENEKLEEKKTVERKKSVEVKTKIQGTDDNAKNKTNKDAKLHAQPSWLWQISTDHQYLRDMPLYRKKIMHRGAMLSIPRYRLRASSLPDMYRNSMWSFESDSDDEMEWYHRFWQSTKNMFDFRMLMELHFFLLNLSSMILSVWFIVPYFFLNSYMKDYNVEGGATMISIIGVASSIGIVALGWTGDQPWVNVTKTYAICLIVCGVSVAAYPLFITNYWMLSVISAVFGVTFASTYSYTPAILMELLPVENFTVGYGLILLNEGIGHLIGPPIGGLLYDLTGTWDLTFYMGGLWIVISGLCVGLVDFTRNRQMCGSAPLLKEAAASDGDDSSEE

Summary

EMBL
BABH01031610    NWSH01000554    PCG75685.1    KZ150013    PZC75044.1    KQ458981    + More
KPJ04472.1    ODYU01004928    SOQ45305.1    KQ460882    KPJ11474.1    RSAL01000317    RVE42585.1    BABH01031609    JTDY01003280    KOB69810.1    AGBW02008415    OWR53453.1    NWSH01007033    PCG63126.1    KZ149921    PZC77732.1    ODYU01000260    SOQ34727.1    RSAL01000304    RVE42716.1    BABH01037649    KQ460124    KPJ17668.1    KQ459603    KPI93154.1    AGBW02014130    OWR42229.1    GEBQ01017028    GEBQ01016920    GEBQ01012615    GEBQ01001956    JAT22949.1    JAT23057.1    JAT27362.1    JAT38021.1    GECZ01022618    GECZ01008634    JAS47151.1    JAS61135.1    GEDC01021494    JAS15804.1    GECU01028486    GECU01022863    GECU01016348    GECU01008024    JAS79220.1    JAS84843.1    JAS91358.1    JAS99682.1    GEDC01013652    JAS23646.1    NEVH01009422    PNF33023.1    KQ435732    KOX77337.1    PYGN01000790    PSN40793.1    GECZ01021235    JAS48534.1    GL444372    EFN60961.1    GL888062    EGI68511.1    KQ981189    KYN45223.1    KZ288212    PBC32804.1    KQ982365    KYQ57127.1    GEZM01099141    JAV53466.1    KQ978820    KYN28133.1    NNAY01001665    OXU23277.1    DS235115    EEB12167.1    KQ976595    KYM79626.1    GL771849    EFZ09427.1    KQ779356    OAD51997.1    KQ971361    EFA08671.2    QOIP01000010    RLU17786.1    KK107167    EZA56497.1    ABLF02030750    GGMR01004731    MBY17350.1    KQ459435    KPJ01099.1    LBMM01005754    KMQ91230.1    APGK01038976    APGK01038977    APGK01038978    APGK01038979    KB740966    ENN76911.1    GL448543    EFN84342.1    KQ434924    KZC11585.1    APGK01038973    KB631578    ENN76910.1    ERL84404.1    KPI93156.1    ODYU01001747    SOQ38363.1    PZC77733.1    KQ977279    KYN03989.1    RVE42717.1    BABH01037651    KPJ17669.1    GAPW01000291    JAC13307.1    JTDY01005603    KOB66842.1    JXUM01119799    JXUM01119800    KQ566325    KXJ70232.1    KZC11586.1    GAPW01000290    JAC13308.1    EFN60962.1    GEDC01030362    GEDC01016970    JAS06936.1    JAS20328.1    LBMM01005457    KMQ91497.1    EFN84344.1    KQ414855    KOC60127.1    OAD51996.1    OWR42228.1    GFTR01007803    JAW08623.1    EZA56496.1    RLU17785.1    KYM79627.1    GEZM01042994    GEZM01042993    JAV79402.1    ACPB03014175    ADTU01022996    CVRI01000053    CRK99823.1    KYQ57128.1    GBHO01025619    GDHC01000641    JAG17985.1    JAQ17988.1    KYN03988.1    GFTR01007370    JAW09056.1    EGI68512.1    GGMS01007197    MBY76400.1    NNAY01000581    OXU27562.1    KYN28134.1    GEDC01029848    JAS07450.1    GECZ01002733    JAS67036.1    EFZ09435.1    EEB12161.1    GANO01004466    JAB55405.1    GGMR01004318    MBY16937.1    EFA08184.1    GFDF01009381    JAV04703.1    GFDF01009380    JAV04704.1    GFDF01009382    JAV04702.1   
Pfam
PF07690   MFS_1
Interpro
IPR011701   MFS        + More
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
SUPFAM
SSF103473   SSF103473       

Ontologies

Topology

Length:
773
Number of predicted TMHs:
12
Exp number of AAs in TMHs:
260.38384
Exp number, first 60 AAs:
0
Total prob of N-in:
0.99039
inside
1  -  91
TMhelix
92  -  114
outside
115  -  133
TMhelix
134  -  156
inside
157  -  162
TMhelix
163  -  182
outside
183  -  191
TMhelix
192  -  214
inside
215  -  220
TMhelix
221  -  243
outside
244  -  252
TMhelix
253  -  270
inside
271  -  567
TMhelix
568  -  590
outside
591  -  602
TMhelix
603  -  625
inside
626  -  637
TMhelix
638  -  660
outside
661  -  663
TMhelix
664  -  686
inside
687  -  692
TMhelix
693  -  715
outside
716  -  724
TMhelix
725  -  744
inside
745  -  773
 
 

Population Genetic Test Statistics

Pi
19.946194
Theta
21.144134
Tajima's D
-0.491413
CLR
10.721381
CSRT
0.247387630618469
Interpretation
Uncertain
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