Gene

KWMTBOMO12770

Pre Gene Modal

BGIBMGA007155

Annotation

PREDICTED:_BTB/POZ_domain-containing_protein_2-like_[Amyelois_transitella]

Location

Bomo_Chr21(-):14074572-14078053      View in EpiBrowser

Full name

BTB/POZ domain-containing protein 2      

Location in the cell

Cytoplasmic   Reliability : 1.269

CDS

ATGGCATCTTCGTCTAAAAATGATTTAGTTGTGAACAGACTGCTGAATGCGAGGCTTGAAGAAGGCGGCGGCGCCGACGAGCTGCCGCCGCAGAACATGCTGCCCTCGCACCAACACTTACGGCAAGTCGGACATCTTCATGAGGACGAGAATGGTCACGCACCAGACCCTGCCCCTTCCGCTACAGAGAATCTGCAGCCGTCCAACACTGCGGGCCGCTTGCATAATTGGCAAGCTACCAAAACAACAGTTAAGGAACGTTTGTCTTTTCTTTTTAACAACGAAATTCTTTGCGATGTACATTTTGTTGTCGGTAAAGGCGCAAATCAGCAAATTATACCTGCCCACAAGTTCGTGCTGTCTGTCGGCAGTGCGGTGTTCGATGCCATGTTCAATGGAGTACTCGCAACCAAGTCTAATGAGGTAGAACTACCTGATGTTGAACCGGCAGCTTTTCTCCATTTACTAAAGTTTCTGTACTCAGATGAAGTGCGCATTGGCCCAGAGAGTGTTATGACGACACTGTACACAGCTAAGAAATATGCTGTTGCAGCCCTAGAGGAGCATTGTGTAGACTTTTTGAAAAGTAATTTAGGAACAGATAATGCATTTTTATTGTTGACCCAAGCTCGGTTGTTTGATGAACCACAGTTGGCAGCATTGTGTCTTGAAATGATTGACAAAAATACAGCTGATGCACTGAATGCTGAGGGCTTCACAGACATTGATCAGGATACACTAAATGCAGTATTGGAAAGAGATACCTTACGCATCAGAGAGGCAAAAATATTCTCAGCAGTATTACGCTGGTCAGAAGCTGAGTGCCTTAGACGGCAACTACCTGTCACTCCAGGAAACCAAAGAACTGTCTTAGGCCGAGCATTCAATGCTATTCGATTCCCTCTGATGTCGGTGGAAGAATTTGCCATGGGACCTGCTCAAAGCGGGCTGTTAGATGATAGAGAAATTGTGCAGTTGTTCTTGTATTTCACAGTGAATCCAAAGCCAAATGTGGGGTTTCTGGACACCCCTCGCTGCTGCATGACTGGGAAGGATCTGACAGTGAACAGGTTTCCTCAGACGGAGTCGCGATGGGGCTACAGTGGGACTACGGATAGGATTAGGTTCACTGTTGGTCAGAGAATTTTCGTGGTTGGCTTTGGTCTGTATGGATCTTATTTTGGCCCTAGCGAATATGAGGTTCACTTGCAGATCATCCACTTGGCTACAAAGAAAATATGCGGCTCTAACACCACTACGTTCTGTTCTGATGGTACAGATGATACATTTCGAGCTATGTTCAAAGAACCCGTTGAGATTCTACCAAACACTTCATATATTGCTAGTGCTAAATTAAAGGGCATGGATTCTTACTACGGTACAAAAGGATTGCGCCGAGTAACAGTTGACTGTAATAACGGTGAAAAAGTAGTTTTTCAATTTTCCTACGCCGCCGGCAACAACAACGGGACCTCAGTCGAAGATGGTCAAATTCCCGCTATCATATTTTATATTTAG

Protein

MASSSKNDLVVNRLLNARLEEGGGADELPPQNMLPSHQHLRQVGHLHEDENGHAPDPAPSATENLQPSNTAGRLHNWQATKTTVKERLSFLFNNEILCDVHFVVGKGANQQIIPAHKFVLSVGSAVFDAMFNGVLATKSNEVELPDVEPAAFLHLLKFLYSDEVRIGPESVMTTLYTAKKYAVAALEEHCVDFLKSNLGTDNAFLLLTQARLFDEPQLAALCLEMIDKNTADALNAEGFTDIDQDTLNAVLERDTLRIREAKIFSAVLRWSEAECLRRQLPVTPGNQRTVLGRAFNAIRFPLMSVEEFAMGPAQSGLLDDREIVQLFLYFTVNPKPNVGFLDTPRCCMTGKDLTVNRFPQTESRWGYSGTTDRIRFTVGQRIFVVGFGLYGSYFGPSEYEVHLQIIHLATKKICGSNTTTFCSDGTDDTFRAMFKEPVEILPNTSYIASAKLKGMDSYYGTKGLRRVTVDCNNGEKVVFQFSYAAGNNNGTSVEDGQIPAIIFYI

Subunit

Interacts with topoisomerase 1 and with TRIM5 isoform Delta.

Keywords

3D-structure   Alternative splicing   Complete proteome   Cytoplasm   Reference proteome  

Feature

chain  BTB/POZ domain-containing protein 2
splice variant  In isoform 2.

Uniprot

H9JCB0   A0A3S2NAM8   A0A2W1BJ20   A0A194QHQ4   A0A0N1INS2   A0A212FI96   + More
A0A2J7PM96   A0A067QZ20   A0A0L7LNK1   A0A3R7LRF0   A0A1B6DZ41   A0A1B6F9I4   A0A444TR09   A0A293M3J0   F6U947   A0A2U3VKS2   S4RQJ6   A0A452G305   K9J5I1   A0A340XMA8   A0A2Y9LTB1   F1N4P1   I3N027   F1SDH6   A0A2R5LN51   A0A2K6GIV5   A0A2J8J1N5   Q9BX70   A0A2I3T4H7   A0A2J8R3X6   A0A452I7B2   E9PUS2   A0A286XWB4   A0A2K6N2C9   A0A0A0MWD2   A0A2K5KML1   A0A2P2I5H0   H9FBH5   A0A1S3I995   E9PY28   A0A3Q0DCE7   A0A1A6G3F0   A0A452I7C5   A0A1S3HVW3   M3WYA3   A0A147BPP8   A0A3M0JI94   F6ZCT0   A0A226N2D5   F1P111   Q2LE80   A0A2L2YJR1   A0A087UVE2   A0A1L8HWV8   A0A3B4C4H0   A0A3N0Y3P4   A0A2P6KL30   W5KGU3   Q1LXS8   H0WSJ1   Q1LYG7   A0A2D0T9S4   A0A131YLN2   L7MKH8   A0A151NGX9   A0A1A8RFK2   H0YPT1   A0A224YTH3   A0A3P8W6K1   A0A1S3M0H3   A0A3B4D9W6   A0A1A8QC57   A0A1A8MDY2   I3JVF8   A0A437CGX2   A0A1A8SG57   A0A3B4FFP1   A0A3Q3CCI8   Q09WH7   A0A1A8D4K1   A0A1S3R504   A0A3P8NIQ2   A0A3P9DIV4   H2T1L9   A0A060VYV8   H3DCZ7   A0A1A8I5C8   A0A1A8U4B9   A0A3B5B9G6   A0A2D0RTX6   A0A3P8ZR23   A0A1A7YKZ4   A0A1A8GB19   A0A3Q3RBA1   A0A1A8D7F0   A0A1A8KQS2   A0A3P9L775   H2MJH8   A0A023GN15   A0A3Q1IU51  

Pubmed

19121390    28756777    26354079    22118469    24845553    26227816    + More
17495919    19393038    30723633    11818025    14702039    15057824    15489334    12878161    16136131    28562605    19468303    21993624    25319552    28071753    17975172    29652888    20431018    15592404    27762356    26561354    25329095    23594743    26830274    25576852    22293439    20360741    28797301    24487278    25186727    16936789    21551351    24755649    15496914    25069045    17554307   

EMBL

BABH01031601    RSAL01000317    RVE42587.1    KZ150013    PZC75039.1    KQ458981    + More
KPJ04470.1    KQ460882    KPJ11472.1    AGBW02008415    OWR53455.1    NEVH01024418    PNF17453.1    KK853179    KDR10233.1    JTDY01000530    KOB76781.1    QCYY01004488    ROT60912.1    GEDC01006345    GEDC01001672    JAS30953.1    JAS35626.1    GECZ01022929    JAS46840.1    SAUD01000932    RXG72434.1    GFWV01008816    MAA33545.1    LWLT01000008    GABZ01001686    JAA51839.1    AGTP01068767    AEMK02000012    DQIR01033942    DQIR01107034    HCZ89417.1    GGLE01006826    MBY10952.1    NBAG03000535    PNI16685.1    AF355797    AK000393    AK027481    CR457230    AC004678    AC005306    BC000564    BC008035    BC053986    BC094820    AL360275    AACZ04065041    NDHI03003769    PNJ03206.1    AC152410    AAKN02057575    AHZZ02013131    IACF01003532    LAB69146.1    JU328228    AFE71984.1    LZPO01107903    OBS60320.1    AANG04002859    GEGO01002658    JAR92746.1    QRBI01000142    RMC00822.1    AAMC01074929    AAMC01074930    MCFN01000264    OXB61648.1    AADN05000490    DQ327670    CM004467    ABC59311.1    OCT97634.1    IAAA01033349    LAA08359.1    KK121839    KFM81331.1    CM004466    OCU00569.1    RJVU01053127    ROL40813.1    MWRG01009493    PRD27043.1    BX293565    CAK10913.1    AAQR03058737    AAQR03058738    BX005203    GEDV01008373    JAP80184.1    GACK01001246    JAA63788.1    AKHW03003034    KYO36004.1    HAEH01016612    SBS04821.1    ABQF01047542    GFPF01006417    MAA17563.1    HAEG01012072    SBR91395.1    HAEF01013405    SBR54564.1    AERX01001266    CM012453    RVE61801.1    HAEI01014852    SBS17321.1    DQ241789    ABB72847.1    HADZ01022154    SBP86095.1    FR904288    CDQ57510.1    HAED01006614    SBQ92719.1    HADY01020844    HAEJ01002483    SBS42940.1    HADW01007305    HADX01008582    SBP30814.1    HAEC01000169    SBQ68246.1    HAEA01000389    SBQ28869.1    HAEE01014496    SBR34546.1    GBBM01000880    JAC34538.1   

Proteomes

UP000005204    UP000283053    UP000053268    UP000053240    UP000007151    UP000235965    + More
UP000027135    UP000037510    UP000283509    UP000288706    UP000002280    UP000245340    UP000245300    UP000291000    UP000265300    UP000248483    UP000009136    UP000005215    UP000008227    UP000233160    UP000005640    UP000002277    UP000291020    UP000000589    UP000005447    UP000233180    UP000028761    UP000233060    UP000085678    UP000189706    UP000092124    UP000011712    UP000269221    UP000008143    UP000198323    UP000000539    UP000186698    UP000054359    UP000261440    UP000018467    UP000000437    UP000005225    UP000221080    UP000050525    UP000007754    UP000265120    UP000087266    UP000005207    UP000261460    UP000264840    UP000265100    UP000265160    UP000005226    UP000193380    UP000007303    UP000261400    UP000265140    UP000261600    UP000265180    UP000001038    UP000265040   

PRIDE

H9JCB0    F1SDH6    Q9BX70    E9PUS2    E9PY28   

Pfam

PF00651   BTB        + More
PF08005   PHR
PF07707   BACK

Interpro

IPR011705   BACK        + More
IPR011333   SKP1/BTB/POZ_sf       
IPR000210   BTB/POZ_dom       
IPR012983   PHR       
IPR038648   PHR_sf       

SUPFAM

SSF54695   SSF54695       

Gene 3D

2.60.120.820    

ProteinModelPortal

H9JCB0   A0A3S2NAM8   A0A2W1BJ20   A0A194QHQ4   A0A0N1INS2   A0A212FI96   + More
A0A2J7PM96   A0A067QZ20   A0A0L7LNK1   A0A3R7LRF0   A0A1B6DZ41   A0A1B6F9I4   A0A444TR09   A0A293M3J0   F6U947   A0A2U3VKS2   S4RQJ6   A0A452G305   K9J5I1   A0A340XMA8   A0A2Y9LTB1   F1N4P1   I3N027   F1SDH6   A0A2R5LN51   A0A2K6GIV5   A0A2J8J1N5   Q9BX70   A0A2I3T4H7   A0A2J8R3X6   A0A452I7B2   E9PUS2   A0A286XWB4   A0A2K6N2C9   A0A0A0MWD2   A0A2K5KML1   A0A2P2I5H0   H9FBH5   A0A1S3I995   E9PY28   A0A3Q0DCE7   A0A1A6G3F0   A0A452I7C5   A0A1S3HVW3   M3WYA3   A0A147BPP8   A0A3M0JI94   F6ZCT0   A0A226N2D5   F1P111   Q2LE80   A0A2L2YJR1   A0A087UVE2   A0A1L8HWV8   A0A3B4C4H0   A0A3N0Y3P4   A0A2P6KL30   W5KGU3   Q1LXS8   H0WSJ1   Q1LYG7   A0A2D0T9S4   A0A131YLN2   L7MKH8   A0A151NGX9   A0A1A8RFK2   H0YPT1   A0A224YTH3   A0A3P8W6K1   A0A1S3M0H3   A0A3B4D9W6   A0A1A8QC57   A0A1A8MDY2   I3JVF8   A0A437CGX2   A0A1A8SG57   A0A3B4FFP1   A0A3Q3CCI8   Q09WH7   A0A1A8D4K1   A0A1S3R504   A0A3P8NIQ2   A0A3P9DIV4   H2T1L9   A0A060VYV8   H3DCZ7   A0A1A8I5C8   A0A1A8U4B9   A0A3B5B9G6   A0A2D0RTX6   A0A3P8ZR23   A0A1A7YKZ4   A0A1A8GB19   A0A3Q3RBA1   A0A1A8D7F0   A0A1A8KQS2   A0A3P9L775   H2MJH8   A0A023GN15   A0A3Q1IU51  

PDB

3NO8     E-value=1.18878e-61,     Score=601

KEGG

101740000    K10477 BTB/POZ domain-containing protein 1/2 | (RefSeq) BTB/POZ domain-containing protein 2-like

GO

GO:0000932   GO:0005829   GO:0022008   GO:0016853   GO:0005515   GO:0003964   GO:0006278   GO:0016303   GO:0046854   GO:0048015   GO:0004003   GO:0005634   GO:0006289   GO:0016286  

Subcellular location

Cytoplasm   Localizes to punctate or elongated cytoplasmic bodies.   With evidence from 4 publications.

Length:

505

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.15067

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00593

outside

1  -  505

 

 

Pi

13.785508

Theta

16.093873

Tajima's D

-0.730349

CLR

0.33475

CSRT

0.192140392980351

Interpretation

Uncertain