Gene

KWMTBOMO12763

Pre Gene Modal

BGIBMGA007200

Annotation

Vacuolar_protein_sorting_[Operophtera_brumata]

Location

Bomo_Chr21(+):13985374-13988032      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.185 PlasmaMembrane   Reliability : 1.288

CDS

ATGGATCAACCACTCAATCTTAAATTGTCATCATTATCACTAATTTCACAAAACAAATTACAAAATATATTGAGTCAGTGTGGCGAGAAAAAGGATTTAATAATCGATCCATCCTTAATTAAGGCTTTGGAAAGAATATGCGGTGTGACATGGCTCAGACAACATGGAGTTGACAAAATATACAAAATGGATCCCCAACTCGGTCCAACGGCAAACGCAAATAGAGTATACTTTATTCCAGCGTGCATCATAAAATACAAATGTGTCCTGGACCAAATATCATCGCTCATTAGTCAGAATCCATCTATAGCTGACGTAAATGGCTTCCACATCATTATAATTCCAAAAGTCTTAAATTCATTTGATTCCATATTAGAAAGTAAAGGTTTATATGGTGTGGTTAAATTACATGCATTCGCATGGGAATTAATGGTCCTCGATGATCAGTTATTGAGTTTAGAGTTACCATTTTTATTTAAACAGTTATTTGTTGACCAAAATCAGTCCTTACTGTCCGGTGTAGCAATGTCTTTATGGACATTATTTCATGTGACAGGGAGACCTAAAGTAATGTGTTCATTTGGTAAATTTTCTGCGGGAGTACTAGACATGTTAGAAATATATAATGAAACTTATTCTAGAAACTTTGTAGATACAAATAATTCAAGGGATATAGGAGCGTTACTTGTTATAGATCGTACCCAGGATTATGCGTCAAGTCTGCTAACTCCAGCTACATACAGCGGATTGCTTAAAGAAATATTCAGTATAAACTGTGGATTTCTGGATTTGAATGTTAAAGATACAAAAGTAATGAAAGGCAAGTTAAATTTTGATAGTGAACAAAGCAATGAAAGTAAAAGTACAGCAATGCCTTTAGATAGTTCTATAGATAGTCTGTATGCTGAGATAAAACACAGACATTTCTCTGAAGTCCTCAGCGTTCTCAGTTCTAAAGCTAAATTACTTAAAAACGAAGACATAAAAGCATTAGGTATACAAGAAATGAAGCACTTTGTTGCGACCAAACTCCAACAAGTGACTCTCTTCAAGCAAAATCTAGTAAACCATGTGTTAGCTTGTGAAACGATAATATCAGAAATGAGCAACAGATTTGAGAATCTAAAATTAACTGAGACTGAAATGTTGAATAATAGAAACAAAAAGACCAATTATAACTTCCTTGATGAAAACTTCGGGACTGAAATTCACATTTATAATAGTTTGCGTCTGATGTGTTTGTTAAGCTTAACACAAGGTTTGTCTTATGATGAATACAATACATTAGTCAATAAATACCTCTTGGCCTTTGGTTACAAATATTTGTATGTATTCAATAATTTGATCAACTCTGGCTTGCTAATTCAACCTTCGAATATAAAGCTCTCATTAAATATTTCCAATTTAAGTAACTTAAGTGATAAATTACCAAAATGGCAGAATGAATTTCAGACTGCTGCTCATAAATTAAAACAGTTACCATCTAAGCCAGATGATGTAGGTAAGTCATCACCGAGTTATGTTTTCAACGGTGGCTACATACCTTTAGTTGCTATTATCTGTAATGCCATACTCACCTCTGAAAGCCTCAGTGAAGTTCTGACAAAGCTGTCAACTTTGACGGACTTTAAAATTGGTGGTGTAATAAATGAAAAACTGAAAGATGGTGTCGAGACGTTGAATGAGAAATTGTCAAATCTTAAAGTTTCAAATGACTTAGAATTTGGCTGCAAAGATCCTAAGATTTTATCTAAAGTAGTTAAAAGCGACCCGAACTTCTGTAATCTGTTTCAATTAAAGCCAAAAACTATTTTGGTATTTGTAATTGGAGGAGTGAACTATGCAGAGATAGCTGCATGTGAGGTTGTACAAACAAACACTGGAAGCAAGATTTATATTGCAAGTGATTGTGTATCAAATGGCAGTGATTTGATTGCTGCTCACATGTAA

Protein

MDQPLNLKLSSLSLISQNKLQNILSQCGEKKDLIIDPSLIKALERICGVTWLRQHGVDKIYKMDPQLGPTANANRVYFIPACIIKYKCVLDQISSLISQNPSIADVNGFHIIIIPKVLNSFDSILESKGLYGVVKLHAFAWELMVLDDQLLSLELPFLFKQLFVDQNQSLLSGVAMSLWTLFHVTGRPKVMCSFGKFSAGVLDMLEIYNETYSRNFVDTNNSRDIGALLVIDRTQDYASSLLTPATYSGLLKEIFSINCGFLDLNVKDTKVMKGKLNFDSEQSNESKSTAMPLDSSIDSLYAEIKHRHFSEVLSVLSSKAKLLKNEDIKALGIQEMKHFVATKLQQVTLFKQNLVNHVLACETIISEMSNRFENLKLTETEMLNNRNKKTNYNFLDENFGTEIHIYNSLRLMCLLSLTQGLSYDEYNTLVNKYLLAFGYKYLYVFNNLINSGLLIQPSNIKLSLNISNLSNLSDKLPKWQNEFQTAAHKLKQLPSKPDDVGKSSPSYVFNGGYIPLVAIICNAILTSESLSEVLTKLSTLTDFKIGGVINEKLKDGVETLNEKLSNLKVSNDLEFGCKDPKILSKVVKSDPNFCNLFQLKPKTILVFVIGGVNYAEIAACEVVQTNTGSKIYIASDCVSNGSDLIAAHM

Similarity

Belongs to the STXBP/unc-18/SEC1 family.

Uniprot

A0A0L7LAL5   A0A2A4JMJ8   A0A2W1BN30   A0A2H1W3D5   A0A212F9U4   A0A437B540   + More
A0A0N1PG43   A0A194QHQ0   A0A1E1WJ48   A0A336MNX7   Q17EV6   A0A182RF24   A0A182JCX1   B0WYU9   A0A182QKT9   A0A182GW65   A0A1Q3F7K3   U5EYL5   A0A182VVQ8   A0A182NA07   A0A1Y1KUW7   A0A182JRL1   A0A1B0CSR8   A0A1W4XPI2   A0A182PH21   A0A182L9A8   A0A182HKY7   A0A182FSS0   A0A1J1HY38   Q7PUM3   A0A182UGZ2   A0A182VML1   A0A1I8MVJ0   W5J769   A0A182XA08   A0A0M3QY62   A0A067R5H4   A0A2J7RS11   T1I600   B4M469   A0A1B6FKL4   D6WB77   A0A1W4V9C5   Q294G5   A0A1B6JZG3   A0A0A9YVF1   B4KBV9   A0A0Q9XAE1   A0A3B0JP47   A0A1B6DTV4   N6U2R9   A0A146KXN7   A0A1A9VN03   A0A1B0A2I8   U4U269   A0A0L0CL10   A0A182M0U8   A0A2R7W001   A0A1B6LIA7   A0A2P8ZD26   A0A182G0Z2   A0A0A1WSQ6   A0A182YBB5   B4JFQ4   A0A1B0FD79   A0A1A9YEL4   W8C539   A0A034WDT1   A0A2J7RRZ5   B4QUW3   B4PTK7   B3P6J4   B4IC96   Q9VBR1   A0A2M4AR55   A0A2M4AQR8   K7J4Z4   A0A232EYV1   B3LW38   B4N864   A0A1B0DLC0   A0A2J7RRY5   A0A084W267   A0A2J7RRY4   A0A3B0KJR5   A0A1I8NSV3   A0A182SHP5   A0A0K8VWE5   A0A195C472   V3ZES9   A0A026WS41   A0A2A3EER6   A0A087ZSK7   Q8SZS6   A0A310SFI5   E2BTZ9   A0A195BUQ8  

Pubmed

26227816    28756777    22118469    26354079    17510324    26483478    + More
28004739    20966253    12364791    14747013    17210077    25315136    20920257    23761445    24845553    17994087    18362917    19820115    15632085    25401762    23537049    26823975    26108605    29403074    25830018    25244985    24495485    25348373    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    20075255    28648823    24438588    23254933    24508170    30249741    20798317   

EMBL

JTDY01001960    KOB72444.1    NWSH01001097    PCG72620.1    KZ150013    PZC75034.1    + More
ODYU01005928    SOQ47332.1    AGBW02009556    OWR50515.1    RSAL01000164    RVE45333.1    KQ460882    KPJ11467.1    KQ458981    KPJ04465.1    GDQN01004096    JAT86958.1    UFQS01001942    UFQT01001942    SSX12752.1    SSX32194.1    CH477279    EAT44995.1    DS232199    EDS37209.1    AXCN02001521    JXUM01092595    KQ563997    KXJ72951.1    GFDL01011513    JAV23532.1    GANO01000222    JAB59649.1    GEZM01075772    JAV63960.1    AJWK01026493    AJWK01026494    APCN01000875    CVRI01000024    CRK92252.1    AAAB01008987    EAA01309.4    ADMH02002125    ETN58710.1    CP012526    ALC47123.1    KK852872    KDR14570.1    NEVH01000597    PNF43602.1    ACPB03008320    CH940652    EDW59430.1    GECZ01019049    JAS50720.1    KQ971312    EEZ98704.1    CM000070    EAL28999.3    GECU01003393    JAT04314.1    GBHO01010054    GBRD01015522    JAG33550.1    JAG50304.1    CH933806    EDW15811.1    KRG01746.1    OUUW01000008    SPP83997.1    GEDC01008192    JAS29106.1    APGK01044427    KB741026    ENN74911.1    GDHC01018264    GDHC01002937    JAQ00365.1    JAQ15692.1    KB631924    ERL87167.1    JRES01000254    KNC32936.1    AXCM01000128    KK854153    PTY12260.1    GEBQ01016633    JAT23344.1    PYGN01000098    PSN54370.1    JXUM01037701    KQ561138    KXJ79601.1    GBXI01012445    JAD01847.1    CH916369    EDV93535.1    CCAG010017532    GAMC01001987    JAC04569.1    GAKP01006103    JAC52849.1    PNF43604.1    CM000364    EDX14429.1    CM000160    EDW98747.1    CH954182    EDV53664.1    CH480828    EDW44992.1    AE014297    AAF56468.1    GGFK01009767    MBW43088.1    GGFK01009741    MBW43062.1    NNAY01001584    OXU23523.1    CH902617    EDV42616.1    CH964232    EDW81315.2    AJVK01071103    PNF43601.1    ATLV01019524    KE525273    KFB44311.1    PNF43603.1    SPP83998.1    GDHF01009125    JAI43189.1    KQ978344    KYM94976.1    KB202567    ESO89653.1    KK107119    QOIP01000009    EZA58768.1    RLU18858.1    KZ288266    PBC30210.1    AY070542    AAL48013.1    KQ760505    OAD60075.1    GL450531    EFN80898.1    KQ976406    KYM91657.1   

Proteomes

UP000037510    UP000218220    UP000007151    UP000283053    UP000053240    UP000053268    + More
UP000008820    UP000075900    UP000075880    UP000002320    UP000075886    UP000069940    UP000249989    UP000075920    UP000075884    UP000075881    UP000092461    UP000192223    UP000075885    UP000075882    UP000075840    UP000069272    UP000183832    UP000007062    UP000075902    UP000075903    UP000095301    UP000000673    UP000076407    UP000092553    UP000027135    UP000235965    UP000015103    UP000008792    UP000007266    UP000192221    UP000001819    UP000009192    UP000268350    UP000019118    UP000078200    UP000092445    UP000030742    UP000037069    UP000075883    UP000245037    UP000076408    UP000001070    UP000092444    UP000092443    UP000000304    UP000002282    UP000008711    UP000001292    UP000000803    UP000002358    UP000215335    UP000007801    UP000007798    UP000092462    UP000030765    UP000095300    UP000075901    UP000078542    UP000030746    UP000053097    UP000279307    UP000242457    UP000005203    UP000008237    UP000078540   

PRIDE

Q9VBR1    Q8SZS6   

Pfam

PF00995   Sec1        + More
PF08449   UAA

Interpro

IPR001619   Sec1-like        + More
IPR036045   Sec1-like_sf       
IPR027121   VPS33       
IPR027482   Sec-1-like_dom2       
IPR036058   Kazal_dom_sf       
IPR013657   UAA       

SUPFAM

SSF56815   SSF56815        + More
SSF100895   SSF100895       

Gene 3D

3.40.50.1910    

ProteinModelPortal

A0A0L7LAL5   A0A2A4JMJ8   A0A2W1BN30   A0A2H1W3D5   A0A212F9U4   A0A437B540   + More
A0A0N1PG43   A0A194QHQ0   A0A1E1WJ48   A0A336MNX7   Q17EV6   A0A182RF24   A0A182JCX1   B0WYU9   A0A182QKT9   A0A182GW65   A0A1Q3F7K3   U5EYL5   A0A182VVQ8   A0A182NA07   A0A1Y1KUW7   A0A182JRL1   A0A1B0CSR8   A0A1W4XPI2   A0A182PH21   A0A182L9A8   A0A182HKY7   A0A182FSS0   A0A1J1HY38   Q7PUM3   A0A182UGZ2   A0A182VML1   A0A1I8MVJ0   W5J769   A0A182XA08   A0A0M3QY62   A0A067R5H4   A0A2J7RS11   T1I600   B4M469   A0A1B6FKL4   D6WB77   A0A1W4V9C5   Q294G5   A0A1B6JZG3   A0A0A9YVF1   B4KBV9   A0A0Q9XAE1   A0A3B0JP47   A0A1B6DTV4   N6U2R9   A0A146KXN7   A0A1A9VN03   A0A1B0A2I8   U4U269   A0A0L0CL10   A0A182M0U8   A0A2R7W001   A0A1B6LIA7   A0A2P8ZD26   A0A182G0Z2   A0A0A1WSQ6   A0A182YBB5   B4JFQ4   A0A1B0FD79   A0A1A9YEL4   W8C539   A0A034WDT1   A0A2J7RRZ5   B4QUW3   B4PTK7   B3P6J4   B4IC96   Q9VBR1   A0A2M4AR55   A0A2M4AQR8   K7J4Z4   A0A232EYV1   B3LW38   B4N864   A0A1B0DLC0   A0A2J7RRY5   A0A084W267   A0A2J7RRY4   A0A3B0KJR5   A0A1I8NSV3   A0A182SHP5   A0A0K8VWE5   A0A195C472   V3ZES9   A0A026WS41   A0A2A3EER6   A0A087ZSK7   Q8SZS6   A0A310SFI5   E2BTZ9   A0A195BUQ8  

PDB

4BX9     E-value=1.84412e-23,     Score=272

KEGG

101739445    K23281 vacuolar protein sorting-associated protein 33B | (RefSeq) vacuolar protein sorting-associate

GO

GO:0006904   GO:0071224   GO:0042742   GO:0006955   GO:0030897   GO:0090307   GO:0019905   GO:0055085   GO:0016021   GO:0035542   GO:0016197   GO:0033263   GO:0016192   GO:0051287   GO:0005488   GO:0005515   GO:0003677   GO:0004003   GO:0005634   GO:0006289   GO:0016286  

PANTHER

PTHR11679:SF1   PTHR11679  

Length:

649

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.906819999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00309

outside

1  -  649

 

 

Pi

25.39395

Theta

20.799785

Tajima's D

0.650844

CLR

0.647313

CSRT

0.568871556422179

Interpretation

Uncertain