Gene

KWMTBOMO12757

Annotation

PREDICTED:_uncharacterized_protein_LOC105841331_[Bombyx_mori]

Location

Bomo_Chr21(-):13912425-13915163      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.235 PlasmaMembrane   Reliability : 1.374

CDS

ATGTATCATTTTAATCGCGTTTGTTTTGGTCTACGGTGCTCGCCGTACCTTGCTATGAAGACAGTTAAGCGTCTCGCCCGCGATGAAACTGATTTCCCGATCGCTTCAGAAATCGCTAGTGATCATCTTTATATGGATGATCTAGGAGTTTCGGTAGATACGCCCGAGAATGGAATTCAGTTGGCTCATGATTTAATCGAACTATTCAAACGTGGTGGTTTCGACTTAGTTAAATTCGTTAGCAACTCGCCCGAGGTGTTAAAATCGATTCCGCAAGCCAACCGCTTATCTTCAAAAATTGAATTCGATAAGGAGGATAATATGAAGCTCCTAGGTTTAATCTGGTCACCGGTCGAGGATGAATTTTCAATCGCTATTAAATTCAACCCGCAAGCAAAATGTACTAAACGCCTTATGCTTTCCACAATCGCTAAACTGTGGGACATAAACGGATTTTGTGCCCCTGTCATCTTACACGCAAAATTATTAATAAAAGCTCTTTGGATAGCTCAGATTGATTGGGATGTAGAGCCCCCAAGCGACATCTGTGCTGCATGGAAACGCTTTCTTAGTGAACTCCCCGCTCTGCAAGACTTTAAAATACCTCGCTTCGTAGGCATCGTGCCCGAGTCCCGTGTCATACTACTGGGATTTGCGGACGCTTCTGAAAAAGCGATGGGTGCTTCTGTGTACATTTGTGTACAACCGGCTTCCGGACCAAATGAAGTCAATTTAATTGGTGCCAAGAGCAAGGTCGCGCCGCTCAAGGTTGTTACATTAGCCCGCTTAGAGCTTTGTGCTGTAGTATTATTATCGAAGCTGTTTCGATTTGTTATCGACACTGTTTCTCCCCGCTGTCATGTCGACGAAATTTTCGCGTTTACTGATTCGACAGTGACCCTCCATTGGGTTCACTCGTCTCCACATCGCTTTGATACTTTCATTGCGAACCGCATCGCACAAATACAGAACAACCTTGACCCCAAACACTTCTACCATTGTGAAGGTACGCAGAATCCCAGCGACTGCTTGAGTCGTGGTCTCACACCCGCTCAATTATTGAATCACCCGCTGTGGCTCCATGGCCCCACATGGGCTCGTGATGACGTCCATACATGGCCCATCAACCGCTTCACGTTTGATCCCGCACAAGATGAAAAGATATTAGAGCTCAAAAAACAATCAAATGTCTTCATCACTACAGATGAGACAGAACCCTTTCTCTGTACGCTGGCCAAGCGCGTCTCTTCTTGGTCTAAGCTGCTCCGCATTGTGGTGTATATATATCGTTTCTTGGGTAAGCTCCCTCGCTCGGACCGAATGCAACTTGCACATCTACAGTTTGCTGAGACTGCTGTCAAAACTCACCGCCTTTACAATGGCCAATGGGCATAA

Protein

MYHFNRVCFGLRCSPYLAMKTVKRLARDETDFPIASEIASDHLYMDDLGVSVDTPENGIQLAHDLIELFKRGGFDLVKFVSNSPEVLKSIPQANRLSSKIEFDKEDNMKLLGLIWSPVEDEFSIAIKFNPQAKCTKRLMLSTIAKLWDINGFCAPVILHAKLLIKALWIAQIDWDVEPPSDICAAWKRFLSELPALQDFKIPRFVGIVPESRVILLGFADASEKAMGASVYICVQPASGPNEVNLIGAKSKVAPLKVVTLARLELCAVVLLSKLFRFVIDTVSPRCHVDEIFAFTDSTVTLHWVHSSPHRFDTFIANRIAQIQNNLDPKHFYHCEGTQNPSDCLSRGLTPAQLLNHPLWLHGPTWARDDVHTWPINRFTFDPAQDEKILELKKQSNVFITTDETEPFLCTLAKRVSSWSKLLRIVVYIYRFLGKLPRSDRMQLAHLQFAETAVKTHRLYNGQWA

Similarity

Belongs to the synaptobrevin family.

Uniprot

S4NIN9   A0A1S3DBQ3   A0A1S3DIZ2   A0A1S3DMK8   A0A1S3DJJ0   A0A1S3DJC0   + More
A0A1S3DJ34   A0A1S4EIX5   A0A1Y1LIC8   A0A1S3DTS8   A0A1S3DMT1   A0A1S3DM22   A0A0A9W266   A0A0A9VTB0   A0A0A9VUS3   A0A023F096   A0A1S3DMQ9   A0A3Q0JFQ3   A0A3Q0JHG9   A0A3Q0JJJ7   A0A3Q0J7N1   A0A3Q0J7K9   A0A3Q0JCL2   A0A1S3DHM0   A0A1S3DH93   V5GHM7   A0A0A9X9A3   A0A146M0N4   A0A1B6LLT3   A0A1B6MT91   A0A1B6MUZ9   A0A1B6KIX6   A0A1B6KZV2   A0A182I0G9   J9JUM9   A0A0A9W8L8   A0A146LBU6   A0A3Q0IQQ3   A0A1S3CUQ4   A0A1S3DNE5   A0A0J7KGQ6   A0A1Y1KMX0   A0A3Q0J0P0   A0A1B6MFR0   A0A1B6GMH9   A0A1Y1LM33   A0A0J7K7U0   A0A1Y1LIG5   A0A0J7N5Z0   V5GC07   A0A1S3DJC4   A0A0A9XZV3   A0A1B6LDH0   A0A437AV42   A0A0J7KNK6   D7EKN1   W8BU98   A0A0J7KCI2   J9JNP4   X1WRA3   A0A0J7K7L1   A0A0J7N2B8   A0A0J7KCV7   A0A1B6GGX5   D6WY83   W8AH72   X1XU26   A0A0J7KB34   A0A0J7JWZ4   A0A0J7KD57   A0A2S2NNC8   A0A0A9YQQ8   A0A0A9VYL4   A0A0J7KCR4   A0A0A9VSF7   A0A0J7KBZ0   A0A0C9PIT9   A0A3Q0JBZ9   A0A0J7K9A7   A0A0J7KC70   A0A1S3DCY4   A0A0A9XBI3   A0A1S3DMW8   A0A3Q0JGS5   X1WPD9   A0A023F0J1   A0A1S3DMN9   A0A0A9YD88   A0A0A9WAJ3   A0A0J7K952   A0A2S2NCY5   A0A0J7K9I5   A0A1S3DBK1   A0A0V0Z419   A0A2S2QPS5   X1WSS7   A0A182X947   A0A0J7K2F3   A0A0A9WWW3   A0A0J7MVH5  

Pubmed

23622113    28004739    25401762    25474469    26823975    18362917    + More
19820115    24495485   

EMBL

GAIX01013989    JAA78571.1    GEZM01054789    JAV73399.1    GBHO01044644    JAF98959.1    + More
GBHO01044645    JAF98958.1    GBHO01044643    JAF98960.1    GBBI01004276    JAC14436.1    GALX01004947    JAB63519.1    GBHO01027393    JAG16211.1    GDHC01006469    JAQ12160.1    GEBQ01015458    JAT24519.1    GEBQ01000825    JAT39152.1    GEBQ01007199    GEBQ01000222    JAT32778.1    JAT39755.1    GEBQ01028569    JAT11408.1    GEBQ01022991    GEBQ01006185    JAT16986.1    JAT33792.1    APCN01002077    ABLF02004035    ABLF02004036    ABLF02004037    ABLF02004038    ABLF02008018    ABLF02008020    ABLF02012635    ABLF02061171    GBHO01039838    GBHO01006034    JAG03766.1    JAG37570.1    GDHC01014057    JAQ04572.1    LBMM01007770    KMQ89434.1    GEZM01085145    GEZM01085143    JAV60187.1    GEBQ01005223    JAT34754.1    GECZ01006169    JAS63600.1    GEZM01054766    GEZM01054765    JAV73410.1    LBMM01012238    KMQ86334.1    JAV73413.1    LBMM01009496    KMQ88090.1    GALX01000776    JAB67690.1    GBHO01020799    JAG22805.1    GEBQ01018232    JAT21745.1    RSAL01000392    RVE41994.1    LBMM01005079    KMQ91831.1    DS497760    EFA13221.1    GAMC01009674    JAB96881.1    LBMM01009688    KMQ87939.1    ABLF02005684    ABLF02066034    LBMM01012188    KMQ86362.1    LBMM01011492    KMQ86800.1    LBMM01009403    KMQ88162.1    GECZ01008071    JAS61698.1    KQ971357    EFA07702.1    GAMC01021577    GAMC01021573    JAB84982.1    ABLF02001506    ABLF02008029    ABLF02035899    ABLF02037719    ABLF02046327    ABLF02064627    LBMM01010405    KMQ87487.1    LBMM01024307    KMQ82592.1    LBMM01009442    KMQ88136.1    GGMR01005823    MBY18442.1    GBHO01009080    JAG34524.1    GBHO01044316    JAF99287.1    LBMM01009551    KMQ88039.1    GBHO01044317    GBHO01044315    JAF99286.1    JAF99288.1    LBMM01009964    KMQ87756.1    GBYB01000873    JAG70640.1    LBMM01011283    KMQ86917.1    LBMM01009863    KMQ87831.1    GBHO01029149    JAG14455.1    ABLF02006985    GBBI01004211    JAC14501.1    GBHO01020765    GBHO01014531    JAG22839.1    JAG29073.1    GBHO01038800    JAG04804.1    LBMM01011245    KMQ86943.1    GGMR01002421    MBY15040.1    LBMM01011244    KMQ86944.1    JYDQ01000499    KRY07301.1    GGMS01010524    MBY79727.1    ABLF02017056    LBMM01016286    KMQ84479.1    GBHO01034255    GBHO01034254    JAG09349.1    JAG09350.1    LBMM01016285    KMQ84480.1   

Proteomes

UP000079169    UP000075840    UP000007819    UP000036403    UP000283053    UP000007266    + More
UP000054783    UP000076407   

Pfam

PF17921   Integrase_H2C2        + More
PF05380   Peptidase_A17
PF18701   DUF5641
PF00665   rve
PF00078   RVT_1
PF05585   DUF1758
PF03564   DUF1759
PF16528   Exo84_C
PF13774   Longin
PF02945   Endonuclease_7

Interpro

IPR041588   Integrase_H2C2        + More
IPR012337   RNaseH-like_sf       
IPR008042   Retrotrans_Pao       
IPR001584   Integrase_cat-core       
IPR000477   RT_dom       
IPR036397   RNaseH_sf       
IPR008737   Peptidase_asp_put       
IPR040676   DUF5641       
IPR005312   DUF1759       
IPR021109   Peptidase_aspartic_dom_sf       
IPR032403   Exo84_C       
IPR016159   Cullin_repeat-like_dom_sf       
IPR001995   Peptidase_A2_cat       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR011012   Longin-like_dom_sf       
IPR010908   Longin_dom       
IPR000727   T_SNARE_dom       
IPR001969   Aspartic_peptidase_AS       
IPR038563   Endonuclease_7_sf       
IPR004211   Endonuclease_7       

SUPFAM

SSF53098   SSF53098        + More
SSF74788   SSF74788       
SSF50630   SSF50630       
SSF57756   SSF57756       
SSF64356   SSF64356       

Gene 3D

3.30.420.10     2.40.70.10     3.40.1800.10    

ProteinModelPortal

S4NIN9   A0A1S3DBQ3   A0A1S3DIZ2   A0A1S3DMK8   A0A1S3DJJ0   A0A1S3DJC0   + More
A0A1S3DJ34   A0A1S4EIX5   A0A1Y1LIC8   A0A1S3DTS8   A0A1S3DMT1   A0A1S3DM22   A0A0A9W266   A0A0A9VTB0   A0A0A9VUS3   A0A023F096   A0A1S3DMQ9   A0A3Q0JFQ3   A0A3Q0JHG9   A0A3Q0JJJ7   A0A3Q0J7N1   A0A3Q0J7K9   A0A3Q0JCL2   A0A1S3DHM0   A0A1S3DH93   V5GHM7   A0A0A9X9A3   A0A146M0N4   A0A1B6LLT3   A0A1B6MT91   A0A1B6MUZ9   A0A1B6KIX6   A0A1B6KZV2   A0A182I0G9   J9JUM9   A0A0A9W8L8   A0A146LBU6   A0A3Q0IQQ3   A0A1S3CUQ4   A0A1S3DNE5   A0A0J7KGQ6   A0A1Y1KMX0   A0A3Q0J0P0   A0A1B6MFR0   A0A1B6GMH9   A0A1Y1LM33   A0A0J7K7U0   A0A1Y1LIG5   A0A0J7N5Z0   V5GC07   A0A1S3DJC4   A0A0A9XZV3   A0A1B6LDH0   A0A437AV42   A0A0J7KNK6   D7EKN1   W8BU98   A0A0J7KCI2   J9JNP4   X1WRA3   A0A0J7K7L1   A0A0J7N2B8   A0A0J7KCV7   A0A1B6GGX5   D6WY83   W8AH72   X1XU26   A0A0J7KB34   A0A0J7JWZ4   A0A0J7KD57   A0A2S2NNC8   A0A0A9YQQ8   A0A0A9VYL4   A0A0J7KCR4   A0A0A9VSF7   A0A0J7KBZ0   A0A0C9PIT9   A0A3Q0JBZ9   A0A0J7K9A7   A0A0J7KC70   A0A1S3DCY4   A0A0A9XBI3   A0A1S3DMW8   A0A3Q0JGS5   X1WPD9   A0A023F0J1   A0A1S3DMN9   A0A0A9YD88   A0A0A9WAJ3   A0A0J7K952   A0A2S2NCY5   A0A0J7K9I5   A0A1S3DBK1   A0A0V0Z419   A0A2S2QPS5   X1WSS7   A0A182X947   A0A0J7K2F3   A0A0A9WWW3   A0A0J7MVH5  

KEGG

105841331    no KO assigned | (RefSeq) uncharacterized LOC105841331

GO

GO:0003676   GO:0015074   GO:0016021   GO:0004190   GO:0008270  

Length:

464

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.16466

Exp number, first 60 AAs:

0.00052

Total prob of N-in:

0.00923

outside

1  -  464

 

 

Pi

1.174488

Theta

3.572295

Tajima's D

-1.463402

CLR

12.773078

CSRT

0.0578471076446178

Interpretation

Uncertain