Gene

KWMTBOMO12753

Pre Gene Modal

BGIBMGA007164

Annotation

PREDICTED:_putative_nuclease_HARBI1_[Amyelois_transitella]

Location

Bomo_Chr21(-):13885460-13889673      View in EpiBrowser

Full name

Putative nuclease HARBI1      

Alternative Name

Harbinger transposase-derived nuclease

Location in the cell

Nuclear   Reliability : 2.975

CDS

ATGGCAGAAAAACCACCCGAGGAAGTATACGTTTCCGTTGTAGACGAAGAGCCTGAGATATTTGAGCTATTGAAGTGGGATTCGTCGCACACACAGAAGCCCCAAGAGCCGAGACCCGTAGAGAAAGTGCCGACGCTCGAAAAAAGAAGTAGCAAACCACAGGATTGTTATCCTTTCGATCTCGACGATACTGTGTTTATAGACACATACAGACTATCAAAAAACTTAGTCAGGAATCTCTGTGAGGAACTGAAACCTGTAATGCCAGATTCAACAAAATTTGTCGAGTTTTCAATCGAGAACAAAGTGTTAGCAACTCTATCATTTTACGCAACAGGTAAATATCAGAGAACGGCAAAAATGGATTCAAGCATAAATCAGTACTTTGCAACAACAGCAGTTAAGCAAGTCACAGAAGCTCTGAATGACCCAGCCATTGTTAAAAAATATATACACTTCCCGCATTTGAGAAATGAACGGGATGTCATTAAAACTAGATTCTACATGAAGTATGGCATTCCTAATGTTGTGGGTTGTGTTGACTGCACACATGTTCCTATTGCCCGGCCTGAAGATGACCAGAAGCTACATCACAACAAATCCTATCATTCAAAGAAAGTTCAAATTATCTGTGATAGTGACTGCAATATACTGAGTGTGGACTCTACTGCGGGAGGTGCAATGTCTCACGATGCTATACTGCAGAGACACGCTGTCAAGAACGATCTGGATAGCTTGAACAGATCTGGAGAGAACTGCTGGCTCATAGGTGGTCCGCACTACACTCAAAAGATATACCTCATGGTTCCGATACCGAAAATAACGAAGAAATCCCCAGTCTCCCCTGAGAAATACTACTCCACCATGCACTCGCAAGCCCACAGCGCCGTCTTAGAAACGATAAAGCAGCTGAAAAGCAGATGGAAATGTCTCCAAGCGACTTGCAATAAGCAGCTGGACCCGCCCAGCGTGGCGCAGCTCATCGTGGCGTGCTGCGTGCTGCACAACATCTGCGGACAGTACTGCGTGCCCGCGGTCCAGATGGCGCCCGCCGAGGAGAGGCTGGAAGCAATGAAGCAGAAGGTGGCCAACGGACCCGTGCCGCGGAAGCAGATCGAGGACCACGACGGCATGCAGATCAGGACCAGATTGGTTGAAAGGTTATGGAACGAAAGAAGAGTAGCTCCTGAATCAGGTACGAAGAAACGAAAAAAGAACGCAACAGTGGCGTGTCCGCAGCCGCCGCCCCAGCCCGCCCCCCCGCACCACCACCACCACGCGCCGCCCCACTACCAGCACCTGCACGACGAGGCCAACAAGAGGCCGCGCGTCATATCCATGGGCTACGGTCTCAACGTGCAGCCGGGGTGGGAGCACTACCCGCAGCACTGA

Protein

MAEKPPEEVYVSVVDEEPEIFELLKWDSSHTQKPQEPRPVEKVPTLEKRSSKPQDCYPFDLDDTVFIDTYRLSKNLVRNLCEELKPVMPDSTKFVEFSIENKVLATLSFYATGKYQRTAKMDSSINQYFATTAVKQVTEALNDPAIVKKYIHFPHLRNERDVIKTRFYMKYGIPNVVGCVDCTHVPIARPEDDQKLHHNKSYHSKKVQIICDSDCNILSVDSTAGGAMSHDAILQRHAVKNDLDSLNRSGENCWLIGGPHYTQKIYLMVPIPKITKKSPVSPEKYYSTMHSQAHSAVLETIKQLKSRWKCLQATCNKQLDPPSVAQLIVACCVLHNICGQYCVPAVQMAPAEERLEAMKQKVANGPVPRKQIEDHDGMQIRTRLVERLWNERRVAPESGTKKRKKNATVACPQPPPQPAPPHHHHHAPPHYQHLHDEANKRPRVISMGYGLNVQPGWEHYPQH

Description

Transposase-derived protein that may have nuclease activity (Potential). Does not have transposase activity (By similarity).

Cofactor

a divalent metal cation

Similarity

Belongs to the HARBI1 family.

Keywords

Complete proteome   Cytoplasm   Hydrolase   Metal-binding   Nuclease   Nucleus   Reference proteome  

Feature

chain  Putative nuclease HARBI1

Uniprot

H9JCB9   A0A194QFZ9   A0A0N0PBM2   A0A3S2LRV9   A0A212FI90   A0A2A4JV88   + More
A0A0L7L1Q5   A0A3S2NUT6   A0A2A4JE29   A0A2H1VYJ2   A0A437BQ82   A0A2H1WD44   A0A2H1VZW2   A0A437BAR9   A0A0L7K4M1   A0A293LP83   A0A151X7N1   A0A2S2P7Q5   A0A2H1VKZ5   J9KIX5   J9LT00   J9L396   X1WUF6   A0A1Y1MLY4   A0A1Y1MLZ3   A0A3S2PE65   A0A093G779   U3JUS5   A0A218V9C2   H0ZK36   A0A1I8N5U5   A0A1V4KEK5   A0A091VV87   Q6AZB8   A0A091GKG8   A0A094KQ94   A0A093I375   A0A093RJU2   A0A087QYL9  

EC Number

3.1.-.-

Pubmed

19121390    26354079    22118469    26227816    28004739    20360741    + More
25315136    15169610   

EMBL

BABH01031580    BABH01031581    KQ458981    KPJ04473.1    KQ460882    KPJ11475.1    + More
RSAL01000317    RVE42584.1    AGBW02008415    OWR53452.1    NWSH01000554    PCG75686.1    JTDY01003512    KOB69438.1    RSAL01000173    RVE45093.1    NWSH01001816    PCG70036.1    ODYU01005228    SOQ45883.1    RSAL01000021    RVE52552.1    ODYU01007850    SOQ50983.1    ODYU01005483    SOQ46381.1    RSAL01000102    RVE47498.1    JTDY01010953    KOB57850.1    GFWV01005584    MAA30314.1    KQ982441    KYQ56385.1    GGMR01012816    MBY25435.1    ODYU01002883    SOQ40924.1    ABLF02008047    ABLF02013558    ABLF02008467    ABLF02041501    GEZM01030206    GEZM01030205    GEZM01030202    GEZM01030200    GEZM01030198    GEZM01030190    GEZM01030187    JAV85700.1    GEZM01030208    GEZM01030207    GEZM01030201    GEZM01030199    GEZM01030197    GEZM01030195    GEZM01030194    GEZM01030192    GEZM01030188    GEZM01030186    GEZM01030185    GEZM01030184    GEZM01030183    GEZM01030181    JAV85710.1    RSAL01000077    RVE48763.1    KL215509    KFV64973.1    AGTO01000953    MUZQ01000024    OWK62583.1    ABQF01002343    ABQF01002344    LSYS01003385    OPJ82906.1    KL411414    KFR07272.1    BC078390    BC100116    KL448321    KFO82875.1    KL353973    KFZ60795.1    KL206840    KFV86280.1    KL225333    KFW71144.1    KL226001    KFM06323.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000283053    UP000007151    UP000218220    + More
UP000037510    UP000075809    UP000007819    UP000053875    UP000016665    UP000197619    UP000007754    UP000095301    UP000190648    UP000053283    UP000000437    UP000053760    UP000053584    UP000054081    UP000053286   

PRIDE

H9JCB9   

Pfam

PF13359   DDE_Tnp_4

Interpro

IPR027806   HARBI1_dom        + More
IPR026103   HARBI1_animal       

ProteinModelPortal

H9JCB9   A0A194QFZ9   A0A0N0PBM2   A0A3S2LRV9   A0A212FI90   A0A2A4JV88   + More
A0A0L7L1Q5   A0A3S2NUT6   A0A2A4JE29   A0A2H1VYJ2   A0A437BQ82   A0A2H1WD44   A0A2H1VZW2   A0A437BAR9   A0A0L7K4M1   A0A293LP83   A0A151X7N1   A0A2S2P7Q5   A0A2H1VKZ5   J9KIX5   J9LT00   J9L396   X1WUF6   A0A1Y1MLY4   A0A1Y1MLZ3   A0A3S2PE65   A0A093G779   U3JUS5   A0A218V9C2   H0ZK36   A0A1I8N5U5   A0A1V4KEK5   A0A091VV87   Q6AZB8   A0A091GKG8   A0A094KQ94   A0A093I375   A0A093RJU2   A0A087QYL9  

KEGG

101743308    K23222 nuclease HARBI1 [EC:3.1.-.-] | (RefSeq) putative nuclease HARBI1

GO

GO:0005829   GO:0005815   GO:0005886   GO:0005737   GO:0046872   GO:0005634   GO:0004518  

Subcellular location

Nucleus  
Cytoplasm  

Length:

463

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0095

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00215

outside

1  -  463

 

 

Pi

19.924972

Theta

18.220062

Tajima's D

0.082702

CLR

2.497135

CSRT

0.403329833508325

Interpretation

Uncertain