SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12752  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007196
Annotation
PREDICTED:_AP-3_complex_subunit_beta-2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.801
 

Sequence

CDS
ATGACGAGTACGACTTCTTACAACAACGACAAGGTCGTTACCGGCGAGGTGGAGTACCCGGCAAGCGATCCCGCATCAGGGGCGTTCTTTCAACCAGATTTCAAAAAAAACGATGACCTGAAATTAATGCTTGATGGATCAAAGGACTCCCTTAAACTGGAGGCGATGAAGAGAATTATTGGCATGATTGCTAAAGGAAGAGATGCTTCTGATTTATTCCCAGCAGTAGTCAAGAATGTTGTATCTAAGAACATAGAAGTGAAGAAATTAGTTTATGTTTATCTGGTGAGGTATGCTGAAGAACAACAAGACCTAGCTTTGCTGTCGATCAGCACTTTCCAGAGAGCTTTAAAGGATCCTAATCAACTAATAAGAGCGAGCGCCCTAAGAGTGTTATCCTCAATCCGCGTGCCCATGATAGTTCCAATTGTGATGTTGGCCATCAGAGACTCAGCTGCCGACATGAGTCCGTATGTAAGGAAGACTGCTGCCCACGCAATACCCAAACTTTATAGCTTGGATCCAGAACAGAAGGAGGAATTGGTTGCCATAATAGACAAGCTGCTATCGGACAAGGCGCCGCTTGTGGTCGGCTCTGCTGCGATGGCCTTCTCGGAGGTGTGCGGCGACCGGATGAGCCTCATACACAGGAGCTACAGGAAATTGTGCGGCTTGCTGGCCGATGTGGACGAGTGGGGACAGCTGGCCATCCTGAATGTGCTGACGGTGTACGCCAAAACCTTCTTCCCCGACCCAAACAGTGAGGAGTACTCGAGCGACAGCGAATCAGAGAAGCCGTTCTACGAGTCGGACAGCGACGAGGACAGTCCCCGGAAGCACTCCCGCTCCCCCACCGTGGACCCCGACCTCAGGCTGCTGCTGCGCGCGGCCAAACCCTTGCTGCAGAGCAGGAACTCCGGAGTCGTGATGGCTGTGGCGCAACTGTTCTACCACTGTGCTCCCGCCCAGGAGCTGCCGCCGGTGGCGAAGGCCATGATACGGCTGCTGCGCGCCCCGGTGGAGGTGCAGAGCGTGGTGCTGAACTGCATCGCCGCCCTCACGGTCTCCAGGCGGGCGCTGTTCGACCCGTACTTAAAGTCGTTTCTCATTCGGAACTCGGATCCGAGTCACATCAAGCTGCTGAAGCTGGAGATCCTGACGAACCTGGCGACGGAGAGCAGCGCGGCCGGCGTCATCCGGGAGCTGCAGGCGCACGCGGGCGGCGGGGAGCGGGGGGTGCGCGCCGCCACGCTGCACGCGCTGGGCCGCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCTCCCCCGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCCTGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCCTGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCTCCCCCGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCCTGTCCCTCTACCGGCTCCCTCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCCTGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCTCCCCCGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCCTGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCCTGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCCTGTCCCTCTACCGGCTCCCTCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCTGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCTGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCCCCCCCACTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCCCCCCCACTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCCCCCCCACTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCCCCCCACTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCCCCCCCACTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCCCCCCCACTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCCCCCCCACTGTCCCTCTACCGCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCCCCCCCACTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGAGTGGGTGGTGTGCGAAGCCGTGGTGGTGGTGAAGAGAGTGGTGGGAGGCGGCGCTGCGTCCGCCAAGGCCGCCGTGGCCCGGGCCGCCAAGCTGCTGCGGTCTGACCGATTGGCGGCCAACGCCCGCGCCGCCGCCGTGTGGCTGGTGGCGGAGCACGGCGCCCACCACCCCCGCGCCGCCGCCGTGCTCGCGCACATGGCCGCCAGCTTCGCCGACCAGGAGGAGCTGGTGAAGCTGCAGGTGCTGTCGCTGGCGGCCAAGCTGTGGGTGACGCAGGCGGACACGGCGCCGGTGTGCCGCTACGCGGTGGCGCTGGCGCGGTACGACGCCAGCTACGACGTGCGCGACCGCGCCCGCATGCTGCGCCGCCTGCTGCTGCCCGCGCCAAGCGCCCGCCTGCCCGCGCACGCCGCGCTCATCTTCTGTCCCGACAAGCCGAAGCCCACCATCGAGAGCAGCTTCAAAGAGCGCCAACAGTACACAGTGGGCACGCTGTCGCAGTACCTGGGCAGCGCGGCCACCGGGTACCGGCCGCTGCCCACCGCGCCCGCCGCCACCAGCGGCGCCGAGCTGCGCGACCAGCACGACCGCGCGCCCCACGACCAGGCCGACACCAAGCAGCTGCAGCAGAAGAACAAAGAATTCTATTCGGAGCCCGAGAGCAGCGGGTCCGGCTCCTCGTCGGGGTCCTCGTCTTCCTCCTCGTCAGGCTCCGAGTCCAGCGGCTCCGAACACTCTTCTGAAGAGGACGAGAGCTCGAACGAAGAGAAACCGTCGAATCAAGAGAAGAAGTCGGTCAAGAAAACAAAAGAAATCAATGATTATGAGTCGTCCAGCCCCGGCACGTCGGACAGCGAGCCCGACAGCGACGCGTCCTCCAGCGACGGCGAGGAGTCCTCCGAGGAGAAAGAAACAGAAATCAAAGAGAAACCGTCCGAACAAAAGCGCAAGGAGCAATCCAACTTGGAGCTGCTGCTGCAGCTGGACGAGGTGGCCAGCACACTGCCCACCATGACCCCCACCTGCGGGGGGCTACTGTCCCCGCCCGCTGCCGCCACTGCCCCAGGACTTGCTGATGACTCGATAACGCCGGTGGGGCCGTCCCTGGTGCCCCCCATATCGACCGAGCTGGTCTCCAGGGTGCTGAGCGGGGGGCTGTCGGCCTCCCGGCGCTGGACCCGGGCCCCGCACCTCTACTCCAACAACATGTGCACCTTGGAGATCAGCTTCACAAACTGCGCCGGGGTCGAGGTCCAGAACATCCACATCAGTAAGAAGTTCCTGTCGGGGTCCCGGAGCGTCCACGAGTTCTCCCCGATCCCGTCGTTGGGCCCGGGGGCATCAGCGACCGTCACGCTCGGCATCGACTTCGCCGACAGCATCCAGCCGGTCGAGCTCGCGGTGTCCAGCTCCCTGGGTGAGGTGACGGTGACCATCAAGCCGCCGGTGGGGGAGCTCATGCGCGCCGTCTCCATGTCTGAGTCGCGCTGGGACGCAGAGTTCGACAAGCTGCGGGGCCTCACGGAGTGCGAGCGGGAGGGTGCGCCGCTGGAGGACGACGCGCTGGTCTGCCGGAGGGTGTTCGAGACCGCCAACCTGGCCGCCGTCGGAGCCCCCGGGGACCCGCTCAGGTTCGCGGGGCGGCTGCTGTCGTCCCAGGAGCTGGTGCTGGTGGCGGTGCGGCGCGGGCGGGGGGGCGGCGCCCGGCGGGTGTGCGCGCGCTGCCCCAACATGGCGGCCGCCTCCATACTCGCCAACGACATCGCGCAGGCCTTCCACAAGCTGCACGCGGTCTAG
Protein
MTSTTSYNNDKVVTGEVEYPASDPASGAFFQPDFKKNDDLKLMLDGSKDSLKLEAMKRIIGMIAKGRDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRVPMIVPIVMLAIRDSAADMSPYVRKTAAHAIPKLYSLDPEQKEELVAIIDKLLSDKAPLVVGSAAMAFSEVCGDRMSLIHRSYRKLCGLLADVDEWGQLAILNVLTVYAKTFFPDPNSEEYSSDSESEKPFYESDSDEDSPRKHSRSPTVDPDLRLLLRAAKPLLQSRNSGVVMAVAQLFYHCAPAQELPPVAKAMIRLLRAPVEVQSVVLNCIAALTVSRRALFDPYLKSFLIRNSDPSHIKLLKLEILTNLATESSAAGVIRELQAHAGGGERGVRAATLHALGRLALAVRPHTDACLASLLHLLSSKDGTQRLPRPSTAPLPRARRAPAHRRLPRLAAAPALQQGRYAAPPPCPSTGSLPRARRAPAHRRLPRLAAAPALQQGRYAAPPPCPSTGSLPRARRAPAHRRLPRLAAAPALQQGRYAAPPPSLYRPPPSRSPCARTPTPASPRCCTCSPARTVRSAPPLSLYRLPPRARRAPAHRRLPRLAAAPALQQGRYAAPPPCPSTGSLPRARRAPAHRRLPRLAAAPALQQGRYAAPPPSLYRPPPSRSPCARTPTPASPRCCTCSPARTVRSAPPLSLYRLPPSRSPCARTPTPASPRCCTCSPARTVRSAPPVPLPPPSLALAVRPHTDACLASLLHLLSSKDGTQRPPPVPLPAPSLALAVRPHTDACLASLLHLLSSKDGTQRPPRPSTAPLPRARRAPAHRRLPRLAAAPALQQGRYAAPPPCPSTGSLLALAVRPHTDACLASLLHLLSSKDGTQRPPCPSTAPLPRARRAPAHRRLPRLAAAPALQQGRYAAPPPVPLPAPSLALAVRPHTDACLASLLHLLSSKDGTQRPPRPSTAPLPRARRAPAHRRLPRLAAAPALQQGRYAAPPPVPLPAPSLALAVRPHTDACLASLLHLLSSKDGTQRPPRPSTGSLPRARRAPAHRRLPRLAAAPALQQGRYAAPPPSLYRLPPSRSPCARTPTPASPRCCTCSPARTVRSAPPVPLPPPSLALAVRPHTDACLASLLHLLSSKDGTQPPHCPSTAPLPRARRAPAHRRLPRLAAAPALQQGRYAAPPPSLYRLPPSRSPCARTPTPASPRCCTCSPARTVRSAPPVPLPAPSLALAVRPHTDACLASLLHLLSSKDGTQRPPCPSTAPLPRARRAPAHRRLPRLAAAPALQQGRYAAPPLSLYRPPPSRSPCARTPTPASPRCCTCSPARTVRSPPTVPLPPPSLALAVRPHTDACLASLLHLLSSKDGTQPPTVPLPPPSLALAVRPHTDACLASLLHLLSSKDGTQPPHCPSTAPLPRARRAPAHRRLPRLAAAPALQQGRYAAPPLSLYRPPPSRSPCARTPTPASPRCCTCSPARTVRSPPTVPLPPPPSRSPCARTPTPASPRCCTCSPARTVRSPPTVPLPPPSLALAVRPHTDACLASLLHLLSSKDEWVVCEAVVVVKRVVGGGAASAKAAVARAAKLLRSDRLAANARAAAVWLVAEHGAHHPRAAAVLAHMAASFADQEELVKLQVLSLAAKLWVTQADTAPVCRYAVALARYDASYDVRDRARMLRRLLLPAPSARLPAHAALIFCPDKPKPTIESSFKERQQYTVGTLSQYLGSAATGYRPLPTAPAATSGAELRDQHDRAPHDQADTKQLQQKNKEFYSEPESSGSGSSSGSSSSSSSGSESSGSEHSSEEDESSNEEKPSNQEKKSVKKTKEINDYESSSPGTSDSEPDSDASSSDGEESSEEKETEIKEKPSEQKRKEQSNLELLLQLDEVASTLPTMTPTCGGLLSPPAAATAPGLADDSITPVGPSLVPPISTELVSRVLSGGLSASRRWTRAPHLYSNNMCTLEISFTNCAGVEVQNIHISKKFLSGSRSVHEFSPIPSLGPGASATVTLGIDFADSIQPVELAVSSSLGEVTVTIKPPVGELMRAVSMSESRWDAEFDKLRGLTECEREGAPLEDDALVCRRVFETANLAAVGAPGDPLRFAGRLLSSQELVLVAVRRGRGGGARRVCARCPNMAAASILANDIAQAFHKLHAV

Summary

Uniprot
ProteinModelPortal
PDB
2XA7     E-value=3.45786e-36,     Score=387

Ontologies

Topology

Length:
2170
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.62601
Exp number, first 60 AAs:
0.00043
Total prob of N-in:
0.12252
outside
1  -  2170
 
 

Population Genetic Test Statistics

Pi
2.832302
Theta
5.07133
Tajima's D
-1.870586
CLR
164.330314
CSRT
0.0178991050447478
Interpretation
Possibly Positive selection
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