Silkworm Genome Informatics Database

Gene

KWMTBOMO12752 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007196

Annotation

PREDICTED:_AP-3_complex_subunit_beta-2_[Bombyx_mori]

Location

Bomo_Chr21(+):13858744-13882828 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.801

CDS

ATGACGAGTACGACTTCTTACAACAACGACAAGGTCGTTACCGGCGAGGTGGAGTACCCGGCAAGCGATCCCGCATCAGGGGCGTTCTTTCAACCAGATTTCAAAAAAAACGATGACCTGAAATTAATGCTTGATGGATCAAAGGACTCCCTTAAACTGGAGGCGATGAAGAGAATTATTGGCATGATTGCTAAAGGAAGAGATGCTTCTGATTTATTCCCAGCAGTAGTCAAGAATGTTGTATCTAAGAACATAGAAGTGAAGAAATTAGTTTATGTTTATCTGGTGAGGTATGCTGAAGAACAACAAGACCTAGCTTTGCTGTCGATCAGCACTTTCCAGAGAGCTTTAAAGGATCCTAATCAACTAATAAGAGCGAGCGCCCTAAGAGTGTTATCCTCAATCCGCGTGCCCATGATAGTTCCAATTGTGATGTTGGCCATCAGAGACTCAGCTGCCGACATGAGTCCGTATGTAAGGAAGACTGCTGCCCACGCAATACCCAAACTTTATAGCTTGGATCCAGAACAGAAGGAGGAATTGGTTGCCATAATAGACAAGCTGCTATCGGACAAGGCGCCGCTTGTGGTCGGCTCTGCTGCGATGGCCTTCTCGGAGGTGTGCGGCGACCGGATGAGCCTCATACACAGGAGCTACAGGAAATTGTGCGGCTTGCTGGCCGATGTGGACGAGTGGGGACAGCTGGCCATCCTGAATGTGCTGACGGTGTACGCCAAAACCTTCTTCCCCGACCCAAACAGTGAGGAGTACTCGAGCGACAGCGAATCAGAGAAGCCGTTCTACGAGTCGGACAGCGACGAGGACAGTCCCCGGAAGCACTCCCGCTCCCCCACCGTGGACCCCGACCTCAGGCTGCTGCTGCGCGCGGCCAAACCCTTGCTGCAGAGCAGGAACTCCGGAGTCGTGATGGCTGTGGCGCAACTGTTCTACCACTGTGCTCCCGCCCAGGAGCTGCCGCCGGTGGCGAAGGCCATGATACGGCTGCTGCGCGCCCCGGTGGAGGTGCAGAGCGTGGTGCTGAACTGCATCGCCGCCCTCACGGTCTCCAGGCGGGCGCTGTTCGACCCGTACTTAAAGTCGTTTCTCATTCGGAACTCGGATCCGAGTCACATCAAGCTGCTGAAGCTGGAGATCCTGACGAACCTGGCGACGGAGAGCAGCGCGGCCGGCGTCATCCGGGAGCTGCAGGCGCACGCGGGCGGCGGGGAGCGGGGGGTGCGCGCCGCCACGCTGCACGCGCTGGGCCGCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCTCCCCCGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCCTGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCCTGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCTCCCCCGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCCTGTCCCTCTACCGGCTCCCTCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCCTGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCTCCCCCGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCCTGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCCTGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCCTGTCCCTCTACCGGCTCCCTCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCTGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCTGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCCCCCCCACTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCCGTCCCTCTACCGGCTCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCGCCCCCCCTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCCCCCCCACTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCCCCCCCACTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCCCCCCACTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCCCCCCCACTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCCCCCCCACTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCCCCCCCACTGTCCCTCTACCGCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGGTACGCAGCCCCCCCACTGTCCCTCTACCGCCCCCCTCCCTCGCGCTCGCCGTGCGCCCGCACACCGACGCCTGCCTCGCCTCGCTGCTGCACCTGCTCTCCAGCAAGGACGAGTGGGTGGTGTGCGAAGCCGTGGTGGTGGTGAAGAGAGTGGTGGGAGGCGGCGCTGCGTCCGCCAAGGCCGCCGTGGCCCGGGCCGCCAAGCTGCTGCGGTCTGACCGATTGGCGGCCAACGCCCGCGCCGCCGCCGTGTGGCTGGTGGCGGAGCACGGCGCCCACCACCCCCGCGCCGCCGCCGTGCTCGCGCACATGGCCGCCAGCTTCGCCGACCAGGAGGAGCTGGTGAAGCTGCAGGTGCTGTCGCTGGCGGCCAAGCTGTGGGTGACGCAGGCGGACACGGCGCCGGTGTGCCGCTACGCGGTGGCGCTGGCGCGGTACGACGCCAGCTACGACGTGCGCGACCGCGCCCGCATGCTGCGCCGCCTGCTGCTGCCCGCGCCAAGCGCCCGCCTGCCCGCGCACGCCGCGCTCATCTTCTGTCCCGACAAGCCGAAGCCCACCATCGAGAGCAGCTTCAAAGAGCGCCAACAGTACACAGTGGGCACGCTGTCGCAGTACCTGGGCAGCGCGGCCACCGGGTACCGGCCGCTGCCCACCGCGCCCGCCGCCACCAGCGGCGCCGAGCTGCGCGACCAGCACGACCGCGCGCCCCACGACCAGGCCGACACCAAGCAGCTGCAGCAGAAGAACAAAGAATTCTATTCGGAGCCCGAGAGCAGCGGGTCCGGCTCCTCGTCGGGGTCCTCGTCTTCCTCCTCGTCAGGCTCCGAGTCCAGCGGCTCCGAACACTCTTCTGAAGAGGACGAGAGCTCGAACGAAGAGAAACCGTCGAATCAAGAGAAGAAGTCGGTCAAGAAAACAAAAGAAATCAATGATTATGAGTCGTCCAGCCCCGGCACGTCGGACAGCGAGCCCGACAGCGACGCGTCCTCCAGCGACGGCGAGGAGTCCTCCGAGGAGAAAGAAACAGAAATCAAAGAGAAACCGTCCGAACAAAAGCGCAAGGAGCAATCCAACTTGGAGCTGCTGCTGCAGCTGGACGAGGTGGCCAGCACACTGCCCACCATGACCCCCACCTGCGGGGGGCTACTGTCCCCGCCCGCTGCCGCCACTGCCCCAGGACTTGCTGATGACTCGATAACGCCGGTGGGGCCGTCCCTGGTGCCCCCCATATCGACCGAGCTGGTCTCCAGGGTGCTGAGCGGGGGGCTGTCGGCCTCCCGGCGCTGGACCCGGGCCCCGCACCTCTACTCCAACAACATGTGCACCTTGGAGATCAGCTTCACAAACTGCGCCGGGGTCGAGGTCCAGAACATCCACATCAGTAAGAAGTTCCTGTCGGGGTCCCGGAGCGTCCACGAGTTCTCCCCGATCCCGTCGTTGGGCCCGGGGGCATCAGCGACCGTCACGCTCGGCATCGACTTCGCCGACAGCATCCAGCCGGTCGAGCTCGCGGTGTCCAGCTCCCTGGGTGAGGTGACGGTGACCATCAAGCCGCCGGTGGGGGAGCTCATGCGCGCCGTCTCCATGTCTGAGTCGCGCTGGGACGCAGAGTTCGACAAGCTGCGGGGCCTCACGGAGTGCGAGCGGGAGGGTGCGCCGCTGGAGGACGACGCGCTGGTCTGCCGGAGGGTGTTCGAGACCGCCAACCTGGCCGCCGTCGGAGCCCCCGGGGACCCGCTCAGGTTCGCGGGGCGGCTGCTGTCGTCCCAGGAGCTGGTGCTGGTGGCGGTGCGGCGCGGGCGGGGGGGCGGCGCCCGGCGGGTGTGCGCGCGCTGCCCCAACATGGCGGCCGCCTCCATACTCGCCAACGACATCGCGCAGGCCTTCCACAAGCTGCACGCGGTCTAG

Protein

MTSTTSYNNDKVVTGEVEYPASDPASGAFFQPDFKKNDDLKLMLDGSKDSLKLEAMKRIIGMIAKGRDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRVPMIVPIVMLAIRDSAADMSPYVRKTAAHAIPKLYSLDPEQKEELVAIIDKLLSDKAPLVVGSAAMAFSEVCGDRMSLIHRSYRKLCGLLADVDEWGQLAILNVLTVYAKTFFPDPNSEEYSSDSESEKPFYESDSDEDSPRKHSRSPTVDPDLRLLLRAAKPLLQSRNSGVVMAVAQLFYHCAPAQELPPVAKAMIRLLRAPVEVQSVVLNCIAALTVSRRALFDPYLKSFLIRNSDPSHIKLLKLEILTNLATESSAAGVIRELQAHAGGGERGVRAATLHALGRLALAVRPHTDACLASLLHLLSSKDGTQRLPRPSTAPLPRARRAPAHRRLPRLAAAPALQQGRYAAPPPCPSTGSLPRARRAPAHRRLPRLAAAPALQQGRYAAPPPCPSTGSLPRARRAPAHRRLPRLAAAPALQQGRYAAPPPSLYRPPPSRSPCARTPTPASPRCCTCSPARTVRSAPPLSLYRLPPRARRAPAHRRLPRLAAAPALQQGRYAAPPPCPSTGSLPRARRAPAHRRLPRLAAAPALQQGRYAAPPPSLYRPPPSRSPCARTPTPASPRCCTCSPARTVRSAPPLSLYRLPPSRSPCARTPTPASPRCCTCSPARTVRSAPPVPLPPPSLALAVRPHTDACLASLLHLLSSKDGTQRPPPVPLPAPSLALAVRPHTDACLASLLHLLSSKDGTQRPPRPSTAPLPRARRAPAHRRLPRLAAAPALQQGRYAAPPPCPSTGSLLALAVRPHTDACLASLLHLLSSKDGTQRPPCPSTAPLPRARRAPAHRRLPRLAAAPALQQGRYAAPPPVPLPAPSLALAVRPHTDACLASLLHLLSSKDGTQRPPRPSTAPLPRARRAPAHRRLPRLAAAPALQQGRYAAPPPVPLPAPSLALAVRPHTDACLASLLHLLSSKDGTQRPPRPSTGSLPRARRAPAHRRLPRLAAAPALQQGRYAAPPPSLYRLPPSRSPCARTPTPASPRCCTCSPARTVRSAPPVPLPPPSLALAVRPHTDACLASLLHLLSSKDGTQPPHCPSTAPLPRARRAPAHRRLPRLAAAPALQQGRYAAPPPSLYRLPPSRSPCARTPTPASPRCCTCSPARTVRSAPPVPLPAPSLALAVRPHTDACLASLLHLLSSKDGTQRPPCPSTAPLPRARRAPAHRRLPRLAAAPALQQGRYAAPPLSLYRPPPSRSPCARTPTPASPRCCTCSPARTVRSPPTVPLPPPSLALAVRPHTDACLASLLHLLSSKDGTQPPTVPLPPPSLALAVRPHTDACLASLLHLLSSKDGTQPPHCPSTAPLPRARRAPAHRRLPRLAAAPALQQGRYAAPPLSLYRPPPSRSPCARTPTPASPRCCTCSPARTVRSPPTVPLPPPPSRSPCARTPTPASPRCCTCSPARTVRSPPTVPLPPPSLALAVRPHTDACLASLLHLLSSKDEWVVCEAVVVVKRVVGGGAASAKAAVARAAKLLRSDRLAANARAAAVWLVAEHGAHHPRAAAVLAHMAASFADQEELVKLQVLSLAAKLWVTQADTAPVCRYAVALARYDASYDVRDRARMLRRLLLPAPSARLPAHAALIFCPDKPKPTIESSFKERQQYTVGTLSQYLGSAATGYRPLPTAPAATSGAELRDQHDRAPHDQADTKQLQQKNKEFYSEPESSGSGSSSGSSSSSSSGSESSGSEHSSEEDESSNEEKPSNQEKKSVKKTKEINDYESSSPGTSDSEPDSDASSSDGEESSEEKETEIKEKPSEQKRKEQSNLELLLQLDEVASTLPTMTPTCGGLLSPPAAATAPGLADDSITPVGPSLVPPISTELVSRVLSGGLSASRRWTRAPHLYSNNMCTLEISFTNCAGVEVQNIHISKKFLSGSRSVHEFSPIPSLGPGASATVTLGIDFADSIQPVELAVSSSLGEVTVTIKPPVGELMRAVSMSESRWDAEFDKLRGLTECEREGAPLEDDALVCRRVFETANLAAVGAPGDPLRFAGRLLSSQELVLVAVRRGRGGGARRVCARCPNMAAASILANDIAQAFHKLHAV

Uniprot

NA

ProteinModelPortal

NA

PDB

2XA7 E-value=3.45786e-36, Score=387

KEGG

101743168 K12397 AP-3 complex subunit beta | (RefSeq) AP-3 complex subunit beta-2

PATHWAY

04142 Lysosome - Bombyx mori (domestic silkworm)

GO

GO:0006886 GO:0016192 GO:0030117 GO:0005488 GO:0005515 GO:0003677 GO:0004003 GO:0005634 GO:0006289 GO:0016286

Length:

2170

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.62601

Exp number, first 60 AAs:

0.00043

Total prob of N-in:

0.12252

outside

1 - 2170

Pi

2.832302

Theta

5.07133

Tajima's D

-1.870586

CLR

164.330314

CSRT

0.0178991050447478

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics