SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12749  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007195
Annotation
PREDICTED:_cytochrome_P450_4C1-like_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.751 Nuclear   Reliability : 1.117
 

Sequence

CDS
ATGATTTGGACTGTAGTTGTATTGATTATTTTTATATTCTTGATATGGAAGGCTTTAGAGGATGAGGAGAATCCTCTTGACTCTCTTCCCGGACCAGAAAGGAAGCCGATCATTGGAGCCGCATTGCGATTCGTCAATTTAAATACAAGAGAAATGTTTATAAAATTGCGCGAGTACCATGCGATGTACGGTAATAGATTCGTTGTAAAGATATTCAAGAGGAGAGTCCTGCATCTGTCTAACGAAAAGGATGCTGAGGTCGTATTGTCGCATTCGAAGAACATTAAGAAAAGCAAGGGCTATACGTTTCTGAGTCCTTGGCTCGGCAGCGGTCTCCTGTTGAGCACCGGTTTTAAATGGCACAGCAGACGTAAGATTCTGACACCAACGTTTCACTTTAACATCTTGAAGAGCTTCTTAGAAATCATCAAGGACAAGAGTTGTGACTTGGTGAAGAGATTGGAGGAGTACAGGGGCGAAGAAGTAGACTTGATGCCCGTTATCAGCGACTTTACATTGTATACGATTTGCGAAACTGCAATGGGCACCCAATTGGATTCAGACAAGTCAGCAGAAACCAAGGAATACAAAATGGCCATACTACAAATAGCATCCTTGCTGCTCAACAGACTGACCAAAGTTTGGCTCCACAACGACTTAATATTCGACCAGCTTACAGTTGGGCGAAAGTTTCAGAAGTGCCTCAAACAAGTCCACTCTTTCGCCCATAATGTTATAGTTGAGAGGAAACGACAACGAGCATCTGGTAGAGACTATTCTGTCGTTGCAGAAGATGTATTCGGTCGTAAAAAGAGATTGGCCATGTTAGATCTTTTATTGGAAGCGGAAGAGAAAAATGAAATTGATTTTGAAGGAATAATGGATGAAGTTAATACATTTATGTTTGAGGGACACGACACAACTGCAGTCGCTTTAACGTTCAGTTTGATGTTGGTCGCGGAGGACGATCAAGTTCAAGATCGCATTTACAAGGAACTGCAAGGGATTTTTGGAGACTCTGACCGTCGGCCAACAATCAGTGATGTAGCCGAGATGAAGTACTTGGAAGCTGTAGTGAAGGAGACTCTGAGGCTGTATCCAAGTGTCCCGTTCATCGCTCGAGAGATCACTGAGGACTTTATGCTAGATGACCTAAACATAAAGAAAGGCTCAGAAGTAGTAGTCCACATATATGATCTGCATCGTCGTAAAGAGCTGTTTGCTGACCCCGAGAAGTTCCAGCCCGATAGATTCTTGAACGGAGAACTGAAGCATCCATACAGCTTCGTGCCCTTTAGCGCAGGACCAAGGAACTGTATTGGTCAACGCTTCGCGATGCTGGAAATGAAGTGCGTCCTCAGTGAGATCTGTCGTAGCTTCAGACTAGAACCCCGCACTAAGGGTTGGCGACCTACCCTCGTAGCGGAAATGCTTTTACGACCAAACGAACCTATTCATGTAAAGTTTATTAAACGCAAACAAAGCTGA
Protein
MIWTVVVLIIFIFLIWKALEDEENPLDSLPGPERKPIIGAALRFVNLNTREMFIKLREYHAMYGNRFVVKIFKRRVLHLSNEKDAEVVLSHSKNIKKSKGYTFLSPWLGSGLLLSTGFKWHSRRKILTPTFHFNILKSFLEIIKDKSCDLVKRLEEYRGEEVDLMPVISDFTLYTICETAMGTQLDSDKSAETKEYKMAILQIASLLLNRLTKVWLHNDLIFDQLTVGRKFQKCLKQVHSFAHNVIVERKRQRASGRDYSVVAEDVFGRKKRLAMLDLLLEAEEKNEIDFEGIMDEVNTFMFEGHDTTAVALTFSLMLVAEDDQVQDRIYKELQGIFGDSDRRPTISDVAEMKYLEAVVKETLRLYPSVPFIAREITEDFMLDDLNIKKGSEVVVHIYDLHRRKELFADPEKFQPDRFLNGELKHPYSFVPFSAGPRNCIGQRFAMLEMKCVLSEICRSFRLEPRTKGWRPTLVAEMLLRPNEPIHVKFIKRKQS

Summary

Similarity
Belongs to the cytochrome P450 family.
EMBL
AK343220    BAM73902.1    AK289284    BAM73811.1    AY063500    AAL48299.1    + More
KZ150005    PZC75221.1    EF591060    ABU88427.1    DQ355383    ABC84370.2    KX443462    ASO98037.1    JX310089    AFP20600.1    KX443461    ASO98036.1    GDQN01008735    GDQN01003028    GDQN01001407    JAT82319.1    JAT88026.1    JAT89647.1    KQ458981    KPJ04476.1    KQ460882    KPJ11479.1    KM016732    AID54884.1    PZC75222.1    KP058451    AKP80586.1    KM016731    AID54883.1    AK403264    BAM19668.1    NWSH01006615    PCG63327.1    KY212039    ARA91603.1    KPJ11478.1    BABH01041553    AK343191    BAM73880.1    BABH01031558    BABH01031559    BABH01031560    ODYU01009575    SOQ54099.1    GDQN01004730    GDQN01002632    GDQN01000042    JAT86324.1    JAT88422.1    JAT91012.1    KP001139    AJN91184.1    GU731525    ADE05575.1    FN356972    CAX94850.1    AK289282    BAM73809.1    AK289281    BAM73808.1    KX443466    ASO98041.1    KX443467    ASO98042.1    EF523434    ABP87671.1    EF528484    ABP99018.1    AY113688    AAM54723.1    ODYU01000355    SOQ34985.1    SOQ34986.1    EU273876    ABX64439.1    AB498590    BAI45222.1    KZ150007    PZC75159.1    AK289283    BAM73810.1    NWSH01000604    PCG75378.1    AGBW02012640    OWR44670.1    DQ352137    ABC72321.2    EF017796    ABK27871.1    GDQN01009628    GDQN01002954    JAT81426.1    JAT88100.1    ADMH02001390    ETN62682.1    KM016730    AID54882.1    RSAL01000129    RVE46480.1    GU731527    ADE05577.1    KF701163    AHW57333.1    L38671    AAC21661.1    KM016728    AID54880.1    KX008607    ANC90156.1    PZC75157.1    KF701164    AHW57334.1    EF017797    ABK27872.1    AGBW02010786    OWR47720.1    RVE46478.1    GU731526    ADE05576.1    QCYY01001130    ROT80325.1    RVE46477.1    MF684339    ASX93973.1    PCG75379.1    KF668286    AHC02483.1    GDQN01006741    JAT84313.1    KM217034    AIW79997.1    AGBW02011790    OWR46123.1    FM163384    CAQ57674.1    MH236443    QBA57448.1    KM217037    AIW80000.1    GANO01001299    JAB58572.1    AY328467    AAQ93010.1    GDRN01081744    JAI61950.1    GU969106    ADD63783.1    GDRN01081739    JAI61953.1    GANO01002947    JAB56924.1    KX812713    ASU43935.1    AXCM01004515    GDRN01081741    JAI61951.1    KR057738    AMP19274.1    KX443468    ASO98043.1    JN835470    AFH35031.1    KQ461150    KPJ08736.1    KX660697    AQM57036.1    KM217039    AIW80002.1    KM217038    AIW80001.1    KP001143    AJN91188.1    ATLV01025136    KE525369    KFB52268.1    AAAB01008960    EAA44145.4    AY113687    AAM54722.1   
Pfam
PF00067   p450
Interpro
IPR002401   Cyt_P450_E_grp-I        + More
IPR001128   Cyt_P450       
IPR017972   Cyt_P450_CS       
IPR036396   Cyt_P450_sf       
IPR002403   Cyt_P450_E_grp-IV       
SUPFAM
SSF48264   SSF48264       
Gene 3D
PDB
6C94     E-value=5.18249e-50,     Score=500

Ontologies

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.531075
 
 
Length:
495
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
11.9895899999999
Exp number, first 60 AAs:
11.29533
Total prob of N-in:
0.64880
POSSIBLE N-term signal
sequence
inside
1  -  1
TMhelix
2  -  19
outside
20  -  495
 
 

Population Genetic Test Statistics

Pi
3.144465
Theta
3.439262
Tajima's D
-1.128038
CLR
1.290388
CSRT
0.112844357782111
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号