SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12748  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA014043
Annotation
cytochrome_P450_CYP4S2_[Helicoverpa_armigera]
Location in the cell
Cytoplasmic   Reliability : 1.269 Mitochondrial   Reliability : 1.85
 

Sequence

CDS
ATGTGGTTCAGTCTTCTAGTCGTCGCTGTGATATACGCACTGTGGAAACTCTTTTACAAGGAGGACGATCCTATAGACTCATTACCTGGTCCTGCCAAATTACCGATCATTGGTAATATGTTGGATATGTTCAACATGACGCCTGGCGAAAAATTCAAGTATGAACGACAACTTTCAAAGACGTACAAACAACGGTACATGCAGAAGGTGTTCTATCGTCGCATCGTCTACCTCCACCACCCTGACGATGTCGAGGTCGTCCTGTCACACTCGAAGAATATTACCAAGAATGTGATTTACGATTTCTTGAAACCCTGGCTCGGTACTGGCTTGCTACTATCAACCGGCAGTAAATGGTACAAGAGAAGGAAGATCCTAACTTCGGCATTCCATTTTGATATACTCAAGGACTTCGCAAGTCTCTTTGAGGAGAGGAGCCGTCGTCTGGTGGACCAGCTTAGGGCCAATAACGGAGAGGCAATAAGCATATTACCTGTCATGAATAACTTCACTTTGCTTACCATTTGTGAGACCGCATTGGGCACAAAATTAGACACAGACCGATCGGTAAACACGGCAGCATACAAAGATGCCATCTCGAAAATCGGTCAAATATGTATATATCGACTGTCCAGAATTTGGCTTTACATCGATGCAATATTCAATAGAACAAGTGCGGGCAGAGAATTTGCTAAAAACGTTGACATCATCCATTCTTTCGCTGATAACGTCATCGTCCAGAGAAAGGAACAGAGACTGAACAGCCTTGATAAAGGACTGGTGGAACGTGATGAATTTAACAGAAAGAAGAGAACGGTGCTGTTGGATTTGCTTCTAGAAGCAGAAGCGAAACGTGAAATTGATTTAGAGGGAATCCGGGAAGAAGTCAACACATTTATGTTTGCGGGACACGATACTACGGGGACTGCTTTGACTTTCTCGCTCATGCTGCTATCAGATCACGAGGAAGCACAGGAACGCATCTTGGAAGAGTACAATGAAGTAATGCGCGGTAAAGAAACGCCGACTCTGTCCGAATTCGCAGAAATGAAATACCTCGACGCGGTCATCAAGGAAACCTTAAGGCTATATCCGAATCCGCACAGAATAGGCAGAGTTCTAACCGAAGACATCACTTTAGGTGGTGTACCAATGAGGGCTGGTACAGAAGTATGCGTGCTAACCATCGACCTGCATTACCGCGAGGACTTCTTTCCCGAGCCTGAGAAATTCCGGCCCGAGAGGTTCCTCCGTGGGGAAATACAGCATCCGTACAGCTTTGTTCCGTTCAGCGCGGGACCCAGGAACTGCTTAGGTCAAAAGTTCGCCATGCTGGAGATTAAGAGCGTCTTAACTCACATCTGCAATAACTTCAAATTAGTGCCGATGAAGAGGAACTGGCGAGTCGAGACAGTCAGCGACATAGTTCTGAAACCAGCCGAACCTATTTACATTAAATTTGTACCGCGATAA
Protein
MWFSLLVVAVIYALWKLFYKEDDPIDSLPGPAKLPIIGNMLDMFNMTPGEKFKYERQLSKTYKQRYMQKVFYRRIVYLHHPDDVEVVLSHSKNITKNVIYDFLKPWLGTGLLLSTGSKWYKRRKILTSAFHFDILKDFASLFEERSRRLVDQLRANNGEAISILPVMNNFTLLTICETALGTKLDTDRSVNTAAYKDAISKIGQICIYRLSRIWLYIDAIFNRTSAGREFAKNVDIIHSFADNVIVQRKEQRLNSLDKGLVERDEFNRKKRTVLLDLLLEAEAKREIDLEGIREEVNTFMFAGHDTTGTALTFSLMLLSDHEEAQERILEEYNEVMRGKETPTLSEFAEMKYLDAVIKETLRLYPNPHRIGRVLTEDITLGGVPMRAGTEVCVLTIDLHYREDFFPEPEKFRPERFLRGEIQHPYSFVPFSAGPRNCLGQKFAMLEIKSVLTHICNNFKLVPMKRNWRVETVSDIVLKPAEPIYIKFVPR

Summary

Similarity
Belongs to the cytochrome P450 family.
EMBL
AK343191    BAM73880.1    BABH01041553    BABH01031558    BABH01031559    BABH01031560    + More
KP058451    AKP80586.1    KM016732    KZ150005    AID54884.1    PZC75222.1    KM016731    AID54883.1    AK343220    BAM73902.1    EF591060    ABU88427.1    KQ460882    KPJ11479.1    PZC75221.1    AK289284    BAM73811.1    JX310089    AFP20600.1    KQ458981    KPJ04476.1    KX443461    ASO98036.1    KX443462    ASO98037.1    NWSH01006615    PCG63327.1    DQ355383    ABC84370.2    AK403264    BAM19668.1    AY063500    AAL48299.1    GDQN01008735    GDQN01003028    GDQN01001407    JAT82319.1    JAT88026.1    JAT89647.1    KPJ11478.1    KY212039    ARA91603.1    KM016728    AID54880.1    KZ150007    PZC75157.1    NWSH01000604    PCG75379.1    GDQN01004730    GDQN01002632    GDQN01000042    JAT86324.1    JAT88422.1    JAT91012.1    KQ459597    KPI94938.1    KQ461150    KPJ08735.1    KF701163    AHW57333.1    KX443467    ASO98042.1    GU731525    ADE05575.1    KY212037    ARA91601.1    PCG75378.1    AK289282    BAM73809.1    EU273876    ABX64439.1    AB498590    BAI45222.1    GDQN01006741    JAT84313.1    EF523434    ABP87671.1    EF528484    ABP99018.1    KY212038    ARA91602.1    RSAL01000129    RVE46477.1    AK289281    BAM73808.1    ODYU01009575    SOQ54099.1    MF684339    ASX93973.1    KX443466    ASO98041.1    DQ352137    ABC72321.2    KP001139    AJN91184.1    AK289283    BAM73810.1    FN356972    CAX94850.1    AY113688    AAM54723.1    PZC75159.1    KX008607    ANC90156.1    ODYU01000355    SOQ34985.1    SOQ34986.1    MH236443    QBA57448.1    KM016730    AID54882.1    EF017796    ABK27871.1    EF017797    ABK27872.1    KX443468    ASO98043.1    MH500632    QBC73107.1    KX688003    ARO50435.1    AF251548    AAF70178.1    KQ971372    EFA10756.1    GANO01002947    JAB56924.1    KF668286    AHC02483.1    GEZM01042998    JAV79399.1    NNAY01002731    OXU20676.1    AY337337    AAP94193.1    KPJ08736.1    RVE46478.1    AAZX01000970    RVE46480.1    KF701164    AHW57334.1    GDQN01009628    GDQN01002954    JAT81426.1    JAT88100.1    AGBW02011790    OWR46123.1    GU731527    ADE05577.1    EFA10781.1    NNAY01004274    OXU18121.1    L38671    AAC21661.1    KX687995    ARO50427.1    KP859401    AKZ17711.1    ADMH02001390    ETN62682.1    KPI94937.1    DQ440160    ABF18193.1    AGBW02010786    OWR47720.1    GU731526    ADE05576.1    KX609525    ARN17932.1    KQ435012    KZC13846.1    KP001143    AJN91188.1    KM217038    AIW80001.1    KM217037    AIW80000.1    AY113687    AAM54722.1    FM163384    CAQ57674.1    CH478169    EJY58076.1    KP859402    AKZ17712.1    PZC75158.1   
Pfam
PF00067   p450
Interpro
IPR036396   Cyt_P450_sf        + More
IPR002401   Cyt_P450_E_grp-I       
IPR017972   Cyt_P450_CS       
IPR001128   Cyt_P450       
IPR002403   Cyt_P450_E_grp-IV       
SUPFAM
SSF48264   SSF48264       
Gene 3D
PDB
6C93     E-value=2.05875e-52,     Score=521

Ontologies

Topology

Length:
490
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
3.07251
Exp number, first 60 AAs:
3.02004
Total prob of N-in:
0.16900
outside
1  -  490
 
 

Population Genetic Test Statistics

Pi
16.913649
Theta
16.668591
Tajima's D
-1.556869
CLR
12.707772
CSRT
0.0507974601269936
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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