SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12747  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA014043
Annotation
cytochrome_P450_[Spodoptera_litura]
Location in the cell
Cytoplasmic   Reliability : 3.223
 

Sequence

CDS
ATGCTGCTATCAGATCACGAGGAAGCACAGGAACGCATCTTGGAAGAGTACAATGAAGTAATGCGCGGGAAAGAAACGCCGACTCTGTCCGAATTCGCAGAAATGAAATACCTCGACGCGGTCATCAAAGAAACCTTAAGGCTTTATCCGAATCCGCACAGAGTAGGCAGAGTTCTAACCGAAGACATCACTTTAGGTGGTGTACCAATAAAGGCTGGTACAGAAATAGGCGTGCAAATCATCGACCTGCATCACCGCGAGGACTTCTTTCCCGAGCCTGAGAAATTCCGGCCCGAGAGGTTCCTCCGCGGGGAAATACAGCATCCGTACAGCTTTGTTCCGTTTAGCGCGGGACCCAGGAACTGCTTAGAACAAGTTAACACAAAGACTTGA
Protein
MLLSDHEEAQERILEEYNEVMRGKETPTLSEFAEMKYLDAVIKETLRLYPNPHRVGRVLTEDITLGGVPIKAGTEIGVQIIDLHHREDFFPEPEKFRPERFLRGEIQHPYSFVPFSAGPRNCLEQVNTKT

Summary

Similarity
Belongs to the cytochrome P450 family.
EMBL
BABH01041553    BABH01031558    BABH01031559    BABH01031560    AK343191    BAM73880.1    + More
DQ355381    ABC84368.1    U86001    AAD33076.1    AY588585    AAT08968.1    U86000    AAD33075.1    EF591060    ABU88427.1    KZ150005    PZC75221.1    EF113592    ABL63810.1    KQ460882    KPJ11480.1    JX310089    AFP20600.1    AY063500    AAL48299.1    DQ355384    ABC84371.1    KX443461    ASO98036.1    KM016732    AID54884.1    PZC75222.1    KP058451    AKP80586.1    KM016731    AID54883.1    KPJ11478.1    KPJ11479.1    EU189052    ABW34439.1    NWSH01006615    PCG63327.1    JTDY01006249    KOB66170.1    DQ355383    ABC84370.2    ODYU01009575    SOQ54099.1    KQ458981    KPJ04476.1    AK403264    BAM19668.1    AK343220    BAM73902.1    AK289284    BAM73811.1    KX443462    ASO98037.1    AM086019    CAJ30429.1    AM086018    CAJ30428.1    AM086020    CAJ30430.1    BABH01031561    AGBW02012640    OWR44670.1    U86005    AAD33080.1    AF182171    AAF13053.1    GDQN01010495    JAT80559.1    AY588584    AAT08967.1    AY588580    AAT08963.1    AY588583    AAT08966.1    GFDL01011343    JAV23702.1    AY593870    AAT36349.1    GDQN01008735    GDQN01003028    GDQN01001407    JAT82319.1    JAT88026.1    JAT89647.1    DQ352139    ABC72323.1    AY588587    AAT08970.1    KY212039    ARA91603.1    PYGN01000574    PSN44006.1    DQ355382    ABC84369.1    DS233084    EDS27974.1    AY588586    AAT08969.1    AY593869    AAT36348.1    AY113687    AAM54722.1    AY588589    AAT08972.1    KM016729    AID54881.1    AM086016    CAJ30426.1    GFDL01001167    JAV33878.1    AM086015    CAJ30425.1    DQ352135    ABC72319.1    EU189047    ABW34434.1    AK289283    BAM73810.1    NWSH01000604    PCG75376.1    KZ150007    PZC75158.1    PCG75378.1    DQ352136    ABC72320.1    KX443469    ASO98044.1    EF017797    ABK27872.1    EF017796    ABK27871.1    KX443467    ASO98042.1    LJIG01009428    KRT83099.1    AY113688    AAM54723.1    AXCM01000056    GU731527    ADE05577.1    AXCN02000810    APCN01003847    KM016730    AID54882.1    GGFL01002429    MBW66607.1    KX443468    ASO98043.1    PZC75159.1    AF254755    KQ971372    AAF70496.1    EFA10755.1    AY588582    AAT08965.1    KC840053    AGQ51762.1    EFA10749.2    JX463000    AGN52793.1    NEVH01015306    PNF27063.1   
Pfam
PF00067   p450        + More
PF00474   SSF
Interpro
IPR036396   Cyt_P450_sf        + More
IPR002401   Cyt_P450_E_grp-I       
IPR017972   Cyt_P450_CS       
IPR001128   Cyt_P450       
IPR038377   Na/Glc_symporter_sf       
IPR001734   Na/solute_symporter       
IPR002403   Cyt_P450_E_grp-IV       
SUPFAM
SSF48264   SSF48264       
Gene 3D
PDB
6MJM     E-value=2.46732e-21,     Score=245

Ontologies

Topology

Length:
130
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00153
Exp number, first 60 AAs:
3e-05
Total prob of N-in:
0.09196
outside
1  -  130
 
 

Population Genetic Test Statistics

Pi
17.649253
Theta
16.646788
Tajima's D
0.030227
CLR
0
CSRT
0.391030448477576
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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