SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12744  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007169
Annotation
ras-like_protein_1_[Bombyx_mori]
Full name
Ras-like protein 1      
Alternative Name
Dmras85D
Location in the cell
Cytoplasmic   Reliability : 3.417
 

Sequence

CDS
ATGACCGAGTACAAATTGGTGGTTGTGGGTGCGGGAGGCGTTGGTAAATCCGCATTGACTATACAGCTGATACAGAATCACTTCGTGGACGAATACGATCCCACGATAGAGGATTCGTACCGTAAACAAGTCGTGATCGACGGTGAGACGTGTTTACTCGACATCCTGGACACGGCTGGCCAGGAAGAGTATTCGGCGATGAGAGACCAATACATGCGGACCGGGGAAGGATTCTTGCTGGTATTCGCCGTCAACAGTGCTAAAAGTTTCGAAGACATTGGCTCGTATCGCGAGCAGATCAAGCGAGTGAAGGACGCGGAAGAGGTGCCCATGGTACTTGTGGGCAACAAGTGCGACCTACAGTCGTGGGCCGTAGACATGGCGCGAGCACGAGAGGTGGCGCAAAGCTATAATGTTCCGTTCGTCGAAACATCGGCCAAAACACGCATGGGAGTTGACGACGCTTTCTACACGCTCGTGAGGGAGATACGCAAAGATAAAGTCAGCCGAGACAAGAAATTCAAAGGGAAGAAACCACGTCACGTTCACAAAATAATTAAAGATTGCACCCTTTTTTAA
Protein
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIKRVKDAEEVPMVLVGNKCDLQSWAVDMARAREVAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVSRDKKFKGKKPRHVHKIIKDCTLF

Summary

Description
Ras proteins bind GDP/GTP and possess intrinsic GTPase activity. Plays a role in eye development by regulating cell growth, survival of postmitotic ommatidial cells and differentiation of photoreceptor cells. During larval development, mediates Ptth/tor signaling leading to the production of ecdysone, a hormone required for the initiation of metamorphosis.
Ras proteins bind GDP/GTP and possess intrinsic GTPase activity (By similarity). Plays a role in eye development by regulating cell growth, survival of postmitotic ommatidial cells and differentiation of photoreceptor cells (PubMed:11290305). During larval development, mediates Ptth/tor signaling leading to the production of ecdysone, a hormone required for the initiation of metamorphosis (PubMed:19965758).
Similarity
Belongs to the small GTPase superfamily. Ras family.
Keywords
Cell membrane   Complete proteome   GTP-binding   Lipoprotein   Membrane   Methylation   Nucleotide-binding   Prenylation   Reference proteome  
Feature
chain  Ras-like protein 1
propeptide  Removed in mature form
EMBL
BABH01031555    BABH01031556    BABH01031557    AB176555    BAD83777.1    AGBW02009157    + More
OWR51502.1    KQ460882    KPJ11484.1    HQ026487    ADM25851.1    GDAI01002185    JAI15418.1    KZ150005    PZC75245.1    NWSH01000508    PCG75974.1    ODYU01000681    SOQ35867.1    RSAL01000317    RVE42590.1    GFDG01000894    JAV17905.1    KA647646    AFP62275.1    GAKP01012335    GAKP01012334    JAC46618.1    AXCN02001208    GFDF01003787    JAV10297.1    AXCM01001303    ATLV01019177    KE525264    KFB43899.1    AXCP01001861    AAAB01008799    EAA03664.4    APCN01001981    KX833970    ASW21098.1    GDHF01008207    GDHF01002042    JAI44107.1    JAI50272.1    GAMC01003188    JAC03368.1    JXJN01004286    CCAG010002237    EZ423517    ADD19793.1    JRES01001582    KNC21734.1    UFQS01000097    UFQT01000097    SSW99391.1    SSX19771.1    SSW99392.1    SSX19772.1    SSW99390.1    SSX19770.1    GALA01000761    JAA94091.1    CH477837    EAT35784.1    GAPW01004744    GEHC01000769    JAC08854.1    JAV46876.1    GEZM01058185    JAV71813.1    GANO01000619    JAB59252.1    SSW99389.1    SSX19769.1    LJIG01022888    KRT78212.1    GFDL01014039    JAV21006.1    DS231918    EDS26252.1    KZ288192    PBC34190.1    AAZX01004436    PYGN01000262    PSN49787.1    GBXI01006564    GBXI01000025    JAD07728.1    JAD14267.1    GBYB01014677    GBYB01014678    GBYB01014679    JAG84444.1    JAG84445.1    JAG84446.1    KQ435883    KOX69747.1    ADMH02002017    GGFL01001270    ETN59979.1    MBW65448.1    KR075835    ALE20554.1    GGFK01007833    MBW41154.1    GAMD01000600    JAB00991.1    KK854327    PTY14693.1    GL435766    EFN72630.1    KQ434926    KZC11693.1    GGFM01007305    MBW28056.1    KQ977661    KYN00688.1    GL888932    EGI57316.1    KQ976540    KYM81242.1    KQ981673    KYN38231.1    ADTU01011108    GL453160    EFN76426.1    KQ980581    KYN15412.1    GL770679    EFZ10058.1    QOIP01000004    RLU23626.1    KK853392    KDR07913.1    KQ971312    EEZ98533.1    KQ414934    KOC59296.1    CVRI01000064    CRL05543.1    GFTR01003164    JAW13262.1    GDKW01000511    JAI56084.1    GBBI01002217    JAC16495.1    ACPB03012299    GBGD01003096    JAC85793.1    KY198393    ATJ26462.1    KY198390    ATJ26459.1    KY198391    ATJ26460.1    KY198389    ATJ26458.1    KY198392    ATJ26461.1    KY198394    KY198395    KY198396    KY198397    KY198398    CH940650    ATJ26463.1    ATJ26464.1    ATJ26465.1    ATJ26466.1    ATJ26467.1    KRF82977.1    EDW66895.1    CM000160    EDW96662.1    AF186649    CM000364    AY459550    AAF15515.1    CH480815    EDW42877.1    M16429    M16123    M16428    K01960    AF186648    AE014297    AY089541    AY094888    X73219    AF186650    AAF15516.1    CH954181    EDV49774.1    CH902617    EDV44355.1   
Pfam
PF00071   Ras        + More
PF00004   AAA
PF08542   Rep_fac_C
Interpro
IPR001806   Small_GTPase        + More
IPR027417   P-loop_NTPase       
IPR020849   Small_GTPase_Ras-type       
IPR005225   Small_GTP-bd_dom       
IPR003593   AAA+_ATPase       
IPR008921   DNA_pol3_clamp-load_cplx_C       
IPR013748   Rep_factorC_C       
IPR003959   ATPase_AAA_core       
SUPFAM
SSF52540   SSF52540        + More
SSF48019   SSF48019       
PDB
5USJ     E-value=5.77696e-71,     Score=676

Ontologies

Topology

Subcellular location
Cell membrane  
Length:
192
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.59425
Exp number, first 60 AAs:
0.57744
Total prob of N-in:
0.11669
outside
1  -  192
 
 

Population Genetic Test Statistics

Pi
3.858139
Theta
15.655732
Tajima's D
-0.990226
CLR
0.509741
CSRT
0.138843057847108
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号