Gene

KWMTBOMO12737

Pre Gene Modal

BGIBMGA007193

Annotation

PREDICTED:_m7GpppN-mRNA_hydrolase-like_[Papilio_xuthus]

Location

Bomo_Chr21(+):13555950-13559313      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.069

CDS

ATGAATTCAAGTCATAACAAACACTCTATTCCAATAGATATATTAGATGACCTTTGTAGTCGTTTCATAATAAATCTACCAGCAGAAGATAGAGGAAACCTAGTGAGGATATGCTTCCAGATCGAATTGGCTCATTGGTTTTATTTGGATTATTACTGCACTGACGAATCGAAGAAAGTATACCCCTGTGGTATTAGAGAGTTTGCAGCACATATTTTCCAACATGTCCCGCAACTCCGAGAACATGTTAGCAGTCTAGATGCAGTTTTAGATAACTGGAGAGAATATAAACAGACTGTACCTACATACGGAGCTATACTGCTCGATGATGACCTCTCTCATGTGCTTCTTGTACAATCATATTGGACAAAAGCCTCCTGGGGTTTCCCTAAAGGGAAGGTCAATGAAGATGAGGAGCCCTGGAAGTGTGCTACTAGAGAGGTTCTAGAAGAGACAGGTTTTGATATAAGCAATTTAATCAATAAAAACGATTACATAGAAGCCGTAACACACGACCAAATCGCTCGTTTGTACATTATTGGAAATATTCCCAGAGACACAAAGTTCCAACCTCGCACACGAAACGAGATCAAAGCGTGCGAATGGTTCCCATTGGCGGATTTACCGGCCAATAAAAAAGACATGACGCCCAAAGTCAAAATGGGGGTTAGCCCTAATGCGTTCTTCATGGTCCTACCTTTCGTCAAACGAATGAGACGATGGGTTGCCGAACGCAGCTCCAAGGTATTCACGAACAGTCGTCGAACTCGTCACAAATCGATGGGAGATTTAGAAGCTTCAACGAGCCAGAATAAAAACAAGACCATATCGCAGGGACTGCAAAACGAGATAAATGAATACCAACAAAATTCTGGTCACAAAAATGATTATCAGAATCATGGAAGCAATACAAAAAATGTTAATGGTAATAAAAATGGTGGCAATGGTAACAAAAATGGTGCTAATGGCAATAATAGTGCAAGGAAGGAAAAGAAGGCTGCTAAAAGACAGTTGTTCACGCCACAGAACATCCAGTCGAATAATATTTCACCGGTACAAAAGGAAGACAGTGTTGCCGAGGCTAAAATAGATGAAAGCAAATTAAGCAATTTCATTGCTCCATCTTGGGCAGACTTCAAGTTTGACAAAAGGGCAATTCTTGATTGTCTCACTTGA

Protein

MNSSHNKHSIPIDILDDLCSRFIINLPAEDRGNLVRICFQIELAHWFYLDYYCTDESKKVYPCGIREFAAHIFQHVPQLREHVSSLDAVLDNWREYKQTVPTYGAILLDDDLSHVLLVQSYWTKASWGFPKGKVNEDEEPWKCATREVLEETGFDISNLINKNDYIEAVTHDQIARLYIIGNIPRDTKFQPRTRNEIKACEWFPLADLPANKKDMTPKVKMGVSPNAFFMVLPFVKRMRRWVAERSSKVFTNSRRTRHKSMGDLEASTSQNKNKTISQGLQNEINEYQQNSGHKNDYQNHGSNTKNVNGNKNGGNGNKNGANGNNSARKEKKAAKRQLFTPQNIQSNNISPVQKEDSVAEAKIDESKLSNFIAPSWADFKFDKRAILDCLT

Similarity

Belongs to the serpin family.

Uniprot

H9JCE8   A0A437AWP4   A0A2A4JVE7   A0A194QG70   A0A212FCQ5   A0A2H1VJX0   + More
S4PHZ0   A0A2W1BPJ5   A0A0L7KU06   A0A0N1IG90   A0A2J7QZ12   A0A2P8YIN6   A0A1B6E4F0   A0A067QES9   E2BP76   A0A0L7RHG1   A0A1B6I4Q5   A0A088ACQ5   E2AD15   A0A232EG53   F4W990   A0A1B6MNL8   A0A195B513   A0A158P0V8   A0A195EEL7   A0A151WKJ5   A0A195F3C1   A0A0M8ZSC5   K7IMG9   D6WCP2   A0A0T6B9Z0   A0A1W4X3S3   A0A310SSN5   A0A1Y1KPC7   A0A1E1XPV5   A0A2R5LL72   A0A293MZF2   E9G2H3   A0A1B0GK27   A0A0P5DV70   A0A0K8TS82   A0A1L8DFX5   A0A0P6E3J7   A0A1B0GN89   A0A1A9WRB0   A0A0K8VM28   A0A0A1WZU8   A0A0A1X8P8   Q2M0K0   B4HIK0   W8CAE2   A0A0J9RVT7   A0A0J9RX44   A0A0R1E8B2   B4IU38   A0A2L2Y0K4   Q5U127   Q9VUU4   A0A182QET0   A0A1W4VAY2   A0A1W4VP05   A0A1S3IZY7   A0A0Q5UK15   A0A0P6I8W9   B3M9V9   B4MXW4   Q1DGJ5  

Pubmed

19121390    23643815    26354079    22118469    23622113    28756777    + More
26227816    29403074    24845553    20798317    28648823    21719571    21347285    20075255    18362917    19820115    28004739    29209593    21292972    26369729    25830018    15632085    17994087    24495485    22936249    17550304    26561354    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17510324   

EMBL

BABH01031549    JX027620    AGE13483.1    RSAL01000317    RVE42594.1    NWSH01000508    + More
PCG75981.1    KQ458981    KPJ04487.1    AGBW02009157    OWR51497.1    ODYU01002960    SOQ41123.1    GAIX01005620    JAA86940.1    KZ150005    PZC75237.1    JTDY01005870    KOB66531.1    KQ460882    KPJ11491.1    NEVH01009080    PNF33817.1    PYGN01000568    PSN44115.1    GEDC01004514    JAS32784.1    KK853714    KDQ94595.1    GL449553    EFN82496.1    KQ414590    KOC70407.1    GECU01025826    JAS81880.1    GL438658    EFN68651.1    NNAY01004881    OXU17302.1    GL888002    EGI69272.1    GEBQ01002437    JAT37540.1    KQ976598    KYM79586.1    ADTU01001034    KQ979039    KYN23252.1    KQ983002    KYQ48403.1    KQ981855    KYN34881.1    KQ435876    KOX70145.1    KQ971317    EEZ97803.1    LJIG01002862    KRT84078.1    KQ760478    OAD60243.1    GEZM01081834    JAV61515.1    GFAA01002106    JAU01329.1    GGLE01006150    MBY10276.1    GFWV01021455    MAA46183.1    GL732530    EFX86250.1    AJWK01022514    GDIP01151103    JAJ72299.1    GDAI01000813    JAI16790.1    GFDF01008738    JAV05346.1    GDIQ01069518    JAN25219.1    AJVK01013078    GDHF01012385    JAI39929.1    GBXI01009698    JAD04594.1    GBXI01007036    JAD07256.1    CH379069    EAL30932.3    CH480815    EDW41630.1    GAMC01005826    JAC00730.1    CM002912    KMY99831.1    KMY99829.1    CH891771    KRK05285.1    EDW99901.1    IAAA01004844    LAA00635.1    BT016065    AE014296    AAV36950.1    AFH04447.1    AAF49579.4    AXCN02001739    CH954178    KQS44128.1    GDIQ01007869    JAN86868.1    CH902618    EDV40150.1    CH963876    EDW76883.2    CH901524    EAT32274.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000007151    UP000037510    + More
UP000053240    UP000235965    UP000245037    UP000027135    UP000008237    UP000053825    UP000005203    UP000000311    UP000215335    UP000007755    UP000078540    UP000005205    UP000078492    UP000075809    UP000078541    UP000053105    UP000002358    UP000007266    UP000192223    UP000000305    UP000092461    UP000092462    UP000091820    UP000001819    UP000001292    UP000002282    UP000000803    UP000075886    UP000192221    UP000085678    UP000008711    UP000007801    UP000007798    UP000008820   

PRIDE

H9JCE8    Q9VUU4   

Pfam

PF05026   DCP2        + More
PF00293   NUDIX
PF00079   Serpin

Interpro

IPR015797   NUDIX_hydrolase-like_dom_sf        + More
IPR000086   NUDIX_hydrolase_dom       
IPR020084   NUDIX_hydrolase_CS       
IPR036189   DCP2_BoxA_sf       
IPR007722   DCP2_BoxA       
IPR023796   Serpin_dom       
IPR042178   Serpin_sf_1       
IPR042185   Serpin_sf_2       
IPR036186   Serpin_sf       

SUPFAM

SSF55811   SSF55811        + More
SSF140586   SSF140586       
SSF56574   SSF56574       

Gene 3D

1.10.10.1050     2.30.39.10     3.30.497.10    

ProteinModelPortal

H9JCE8   A0A437AWP4   A0A2A4JVE7   A0A194QG70   A0A212FCQ5   A0A2H1VJX0   + More
S4PHZ0   A0A2W1BPJ5   A0A0L7KU06   A0A0N1IG90   A0A2J7QZ12   A0A2P8YIN6   A0A1B6E4F0   A0A067QES9   E2BP76   A0A0L7RHG1   A0A1B6I4Q5   A0A088ACQ5   E2AD15   A0A232EG53   F4W990   A0A1B6MNL8   A0A195B513   A0A158P0V8   A0A195EEL7   A0A151WKJ5   A0A195F3C1   A0A0M8ZSC5   K7IMG9   D6WCP2   A0A0T6B9Z0   A0A1W4X3S3   A0A310SSN5   A0A1Y1KPC7   A0A1E1XPV5   A0A2R5LL72   A0A293MZF2   E9G2H3   A0A1B0GK27   A0A0P5DV70   A0A0K8TS82   A0A1L8DFX5   A0A0P6E3J7   A0A1B0GN89   A0A1A9WRB0   A0A0K8VM28   A0A0A1WZU8   A0A0A1X8P8   Q2M0K0   B4HIK0   W8CAE2   A0A0J9RVT7   A0A0J9RX44   A0A0R1E8B2   B4IU38   A0A2L2Y0K4   Q5U127   Q9VUU4   A0A182QET0   A0A1W4VAY2   A0A1W4VP05   A0A1S3IZY7   A0A0Q5UK15   A0A0P6I8W9   B3M9V9   B4MXW4   Q1DGJ5  

PDB

5KQ4     E-value=3.98782e-50,     Score=500

KEGG

101737812    K12613 mRNA-decapping enzyme subunit 2 [EC:3.6.1.62] | (RefSeq) Dcp2; m7GpppN-mRNA hydrolase

PATHWAY

03018    RNA degradation - Bombyx mori (domestic silkworm)

GO

GO:0030145   GO:0016787   GO:0003723   GO:0000290   GO:0000932   GO:0050072   GO:0005737   GO:0010603   GO:0035195   GO:0000956   GO:0004386   GO:0005515   GO:0003677   GO:0004003   GO:0005634   GO:0006289   GO:0016286  

Length:

391

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03368

Exp number, first 60 AAs:

0.00649

Total prob of N-in:

0.02278

outside

1  -  391

 

 

Pi

30.523091

Theta

23.069658

Tajima's D

1.023554

CLR

0.351875

CSRT

0.666066696665167

Interpretation

Uncertain