Gene

KWMTBOMO12728

Pre Gene Modal

BGIBMGA007190

Annotation

PREDICTED:_D-amino-acid_oxidase_[Papilio_xuthus]

Location

Bomo_Chr21(+):13481780-13489899      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.4

CDS

ATGTTACAGATAGCTGTCGTGGGCGCCGGAATCAATGGCTTGACTTGCGCTTTGCGGATCCAAGAGAAATACAAGAAATATCGCGTCGTTCTATTAGCGAAACAATTCACCCCGAACACGACAGGGGACGGCTCCGCGGGTCTCTGGTACCCATTCGAAACGGGTAACACGTCCTCGGAATTATTATGTAAATGGGGTACTGCGACATACGAATTCCTGCACGGACTGTGGTTGGAGGGAGGCTTGGATGTATGTGCGGTGCCATTGTCCTTCGTCTATCGGAAGCCAAGAAACGAGAATAAGCCAGACTGGGGTAAACATACTTTCGGATATCGACAGATCGGAGAGAAGCACTTGGAGTATTTGAGCAAAAGGCATTCACAGAAATTCGTATCAGGCCATACCTTCACAACGCTAATTGTTCCACCTACAAAATTAATGGCACACTTTCACAAGCTGTTCGAAGAGGCTGGCGGAAGGACGCTTCAAGTGGAAGTGTCCTCGCTGGAGGACCCGATCTTGGGAGAATATGACGTGGTCGTGAACTGTACCGGGATTGGCGCGAGGGATCTGGTACCAGACAACAGCGTATTCTCTGTTAAAGGACAAGTGACTAAGGTATTCGCCCCTTGGGTCAACGAATGCATCGTGGACATCGACGGTGGAAATTACATCATACCTAATCCCGAAATATGTGTTCTGGGAGGGGTGACCGAGCACGGCAACTACAGCACCGACGTCGACGAGGACACGAGCGCGTTCATATTGAACGGTTGCAAAAAGATGTTGCCGGCGCTGCAGAACGTGGTCGTAGTGAACGAGTGGGCTGGTCTGAGGCCCGGCAGGGACCAGGTCAGGCTCGAAGCCGAGGAGAGGGGCGGGAAGTTGTACCTACACAACTATGGACACGGAGGCAGCGGCTTCACTCTGTTCTGGGGCTGCTCAACTGACGTCTTGTTCCTCTTGGAAAATTACTTAGAAAAGAAAGGAATAATAAAAAAATCGAAACTCTAA

Protein

MLQIAVVGAGINGLTCALRIQEKYKKYRVVLLAKQFTPNTTGDGSAGLWYPFETGNTSSELLCKWGTATYEFLHGLWLEGGLDVCAVPLSFVYRKPRNENKPDWGKHTFGYRQIGEKHLEYLSKRHSQKFVSGHTFTTLIVPPTKLMAHFHKLFEEAGGRTLQVEVSSLEDPILGEYDVVVNCTGIGARDLVPDNSVFSVKGQVTKVFAPWVNECIVDIDGGNYIIPNPEICVLGGVTEHGNYSTDVDEDTSAFILNGCKKMLPALQNVVVVNEWAGLRPGRDQVRLEAEERGGKLYLHNYGHGGSGFTLFWGCSTDVLFLLENYLEKKGIIKKSKL

Cofactor

FAD

Uniprot

H9JCE5   A0A194QG19   A0A2A4JW16   A0A0N1ICY8   A0A2W1BJI1   A0A3S2L063   + More
I4DPR9   A0A212FCN0   A0A2H1VP54   B4JQK4   A0A034WPJ2   B4KJX8   A0A0K8V864   A0A182XNX4   A0A182L895   Q7PWY8   A0A182HK21   A0A182V1A4   A0A1D6TL57   A0A1J1ISD0   A0A2M4BT14   A0A2M3Z1R7   A0A1I8MJB8   A0A1W4UBY4   W8B4K5   A0A182JQN4   B4LRQ6   A0A182U9Y4   A0A1B0AK58   B4HXY3   A0A1A9UUS3   A0A1A9X595   B3MKQ4   A0A2M4CVV9   B4P006   B4N178   A0A182VW98   B3N5X6   A0A182YN98   A0A182R549   A0A182PR53   A0A1A9X8U6   A0A2M4ACP3   Q9VM80   B4Q525   A0A1B0AX58   A0A084WT56   A0A182H454   A0A2M4ACK8   Q29JZ1   B4GKY2   A0A1B0GFN9   A0A0M5J8W3   A0A182M103   A0A2M4ACM8   D3TL16   A0A3B0JL65   A0A1B0D4X5   A0A1S4EV77   Q17Q17   A0A336MZ36   M9NDG8   A0A1Q3FQM4   K7IXN6   A0A0L7QL03   A0A336M7F1   A0A0L0BR71   B0WJC4   A0A232FF57   A0A232EKL9   A0A2J7PTT6   A0A067RKT4   E2A1U5   D6WAM6   K7IR50   A0A1I8PRM8   A0A026X3J9   A0A1L8E2I9   A0A0M8ZS01   A0A1L8E2C6   A0A2M4CK89   A0A182SQS5   A0A1D2ND81   A0A195BEW0   A0A158NBX1   E9J689   A0A151J3C8   A0A195FK04   A0A226EVK3   T1GQ45   A0A0A1X8N8   A0A0K8TZN5   A0A182GZ97   A0A2A3E7E9   A0A088AUZ1   A0A0P6CTT2   E9GU05   A0A0P6D6M7   A0A0N8BCC3   A0A0N8AS57  

Pubmed

19121390    26354079    28756777    22651552    22118469    17994087    + More
25348373    20966253    12364791    14747013    17210077    25315136    24495485    17550304    25244985    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    24438588    26483478    15632085    20353571    17510324    20075255    26108605    28648823    24845553    20798317    18362917    19820115    24508170    27289101    21347285    21282665    25830018    21292972   

EMBL

BABH01031544    BABH01031545    KQ458981    KPJ04493.1    NWSH01000508    PCG75976.1    + More
KQ460882    KPJ11497.1    KZ150005    PZC75232.1    RSAL01000317    RVE42599.1    AK403745    BAM19909.1    AGBW02009156    OWR51505.1    ODYU01003620    SOQ42610.1    CH916372    EDV99184.1    GAKP01001436    JAC57516.1    CH933807    EDW12581.1    GDHF01017268    JAI35046.1    AAAB01008987    EAA01013.5    APCN01000814    CVRI01000058    CRL02618.1    GGFJ01006992    MBW56133.1    GGFM01001705    MBW22456.1    GAMC01014579    GAMC01014577    JAB91978.1    CH940649    EDW64658.1    CH480818    EDW51913.1    CH902620    EDV31585.1    GGFL01004790    MBW68968.1    CM000157    EDW87833.1    CH963920    EDW78018.1    CH954177    EDV59135.1    GGFK01005236    MBW38557.1    AE014134    AY089502    AAF52443.1    AAL90240.1    CM000361    CM002910    EDX04017.1    KMY88631.1    JXJN01005079    ATLV01026856    KE525420    KFB53400.1    JXUM01025363    JXUM01025364    JXUM01025365    KQ560720    KXJ81152.1    GGFK01005196    MBW38517.1    CH379062    EAL32820.1    CH479184    EDW37298.1    CCAG010011480    CP012523    ALC38494.1    AXCM01004139    GGFK01005151    MBW38472.1    EZ422109    ADD18311.1    OUUW01000006    SPP81573.1    AJVK01011634    CH477188    EAT48777.1    UFQT01004079    SSX35490.1    AFH03588.1    GFDL01005201    JAV29844.1    AAZX01012658    KQ414934    KOC59303.1    UFQT01000495    SSX24753.1    JRES01001480    KNC22575.1    DS231958    EDS29059.1    NNAY01000341    OXU29069.1    NNAY01003751    OXU18906.1    NEVH01021221    PNF19743.1    KK852619    KDR20119.1    GL435806    EFN72584.1    KQ971312    EEZ98651.1    KK107036    EZA61974.1    GFDF01001190    JAV12894.1    KQ435883    KOX69757.1    GFDF01001191    JAV12893.1    GGFL01001477    MBW65655.1    LJIJ01000088    ODN03045.1    KQ976500    KYM83113.1    ADTU01011441    GL768230    EFZ11661.1    KQ980286    KYN16939.1    KQ981491    KYN41000.1    LNIX01000001    OXA61612.1    CAQQ02161561    GBXI01007254    JAD07038.1    GDHF01032601    JAI19713.1    JXUM01099086    KQ564468    KXJ72229.1    KZ288356    PBC27212.1    GDIQ01119151    GDIQ01087415    JAN07322.1    GL732565    EFX77055.1    GDIQ01084113    JAN10624.1    GDIQ01191675    JAK60050.1    GDIQ01248203    GDIQ01084114    JAK03522.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000053240    UP000283053    UP000007151    + More
UP000001070    UP000009192    UP000076407    UP000075882    UP000007062    UP000075840    UP000075903    UP000183832    UP000095301    UP000192221    UP000075881    UP000008792    UP000075902    UP000092445    UP000001292    UP000078200    UP000091820    UP000007801    UP000002282    UP000007798    UP000075920    UP000008711    UP000076408    UP000075900    UP000075885    UP000092443    UP000000803    UP000000304    UP000092460    UP000030765    UP000069940    UP000249989    UP000001819    UP000008744    UP000092444    UP000092553    UP000075883    UP000268350    UP000092462    UP000008820    UP000002358    UP000053825    UP000037069    UP000002320    UP000215335    UP000235965    UP000027135    UP000000311    UP000007266    UP000095300    UP000053097    UP000053105    UP000075901    UP000094527    UP000078540    UP000005205    UP000078492    UP000078541    UP000198287    UP000015102    UP000242457    UP000005203    UP000000305   

PRIDE

H9JCE5    Q9VM80    M9NDG8   

Pfam

PF01266   DAO

Interpro

IPR023209   DAO        + More
IPR006076   FAD-dep_OxRdtase       
IPR006181   D-amino_acid_oxidase_CS       

ProteinModelPortal

H9JCE5   A0A194QG19   A0A2A4JW16   A0A0N1ICY8   A0A2W1BJI1   A0A3S2L063   + More
I4DPR9   A0A212FCN0   A0A2H1VP54   B4JQK4   A0A034WPJ2   B4KJX8   A0A0K8V864   A0A182XNX4   A0A182L895   Q7PWY8   A0A182HK21   A0A182V1A4   A0A1D6TL57   A0A1J1ISD0   A0A2M4BT14   A0A2M3Z1R7   A0A1I8MJB8   A0A1W4UBY4   W8B4K5   A0A182JQN4   B4LRQ6   A0A182U9Y4   A0A1B0AK58   B4HXY3   A0A1A9UUS3   A0A1A9X595   B3MKQ4   A0A2M4CVV9   B4P006   B4N178   A0A182VW98   B3N5X6   A0A182YN98   A0A182R549   A0A182PR53   A0A1A9X8U6   A0A2M4ACP3   Q9VM80   B4Q525   A0A1B0AX58   A0A084WT56   A0A182H454   A0A2M4ACK8   Q29JZ1   B4GKY2   A0A1B0GFN9   A0A0M5J8W3   A0A182M103   A0A2M4ACM8   D3TL16   A0A3B0JL65   A0A1B0D4X5   A0A1S4EV77   Q17Q17   A0A336MZ36   M9NDG8   A0A1Q3FQM4   K7IXN6   A0A0L7QL03   A0A336M7F1   A0A0L0BR71   B0WJC4   A0A232FF57   A0A232EKL9   A0A2J7PTT6   A0A067RKT4   E2A1U5   D6WAM6   K7IR50   A0A1I8PRM8   A0A026X3J9   A0A1L8E2I9   A0A0M8ZS01   A0A1L8E2C6   A0A2M4CK89   A0A182SQS5   A0A1D2ND81   A0A195BEW0   A0A158NBX1   E9J689   A0A151J3C8   A0A195FK04   A0A226EVK3   T1GQ45   A0A0A1X8N8   A0A0K8TZN5   A0A182GZ97   A0A2A3E7E9   A0A088AUZ1   A0A0P6CTT2   E9GU05   A0A0P6D6M7   A0A0N8BCC3   A0A0N8AS57  

PDB

1VE9     E-value=1.7484e-39,     Score=408

KEGG

101737245    K00273 D-amino-acid oxidase [EC:1.4.3.3] | (RefSeq) D-amino-acid oxidase

PATHWAY

00260    Glycine, serine and threonine metabolism - Bombyx mori (domestic silkworm)
00330    Arginine and proline metabolism - Bombyx mori (domestic silkworm)
00472    D-Arginine and D-ornithine metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
04146    Peroxisome - Bombyx mori (domestic silkworm)

GO

GO:0046416   GO:0003884   GO:0071949   GO:0019478   GO:0005737   GO:0005777   GO:0008445   GO:0016491   GO:0016020   GO:0009156   GO:0044249   GO:0003677   GO:0004879   GO:0003707   GO:0016286   GO:0055114  

PANTHER

PTHR11530  

Length:

337

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.14733

Exp number, first 60 AAs:

0.17265

Total prob of N-in:

0.01228

outside

1  -  337

 

 

Pi

5.797085

Theta

16.600658

Tajima's D

-1.382417

CLR

1.550199

CSRT

0.0739463026848658

Interpretation

Uncertain