Silkworm Genome Informatics Database

Gene

KWMTBOMO12725

Pre Gene Modal

BGIBMGA007178

Annotation

PREDICTED:_uncharacterized_protein_LOC106652727?_partial_[Trichogramma_pretiosum]

Location

Bomo_Chr21(-):13407010-13442935 View in EpiBrowser

Full name

ATP-dependent DNA helicase

Location in the cell

Nuclear Reliability : 2.305

CDS

ATGACGGATCCGATGATCAAGGTAAAGACGGAGAGGCCTGACGAGGCCGAAATCCGGGAGTTAGCTGCTAAAATGGTGGAGGCGAACAAAGCGAAAGCTCTGGCGGCATCGGTGGCAGCGACGCGTACACCACCTGGAGGTCTAGTGCCACCAGCTTCCGGCCAAATGGGCATCCTAAATTTTTTGACAAGGAAACCTGGAGCGACTGGCACAACAATAGACCAACGACCTGCTCCAGATCCTGAAAAGAAAACCCCTGCTCCAGACGAAGCTAGTTGGAAGGGGCACTTTGGATGGGATGTTCTTGGCAAATGCCACATACCTTATATTTTTCGGTCCAACGAAAAGTATGTGGCAGTCCGGATGGTGGAAATCAAGCTCCTCAACAAGTACCTGAATTACCTCCATGCTGACATCTACTCCTGTACCTGTATCAGAAGTTACTATATTACTGAGATAGAGGCTCGTTTACTCAATGAGATAAGCAACAGGCATTGTGATGGACAGTTTGGCCGGGAAGCATTCACACAGAAAGACTTAGTTGTGAGGTTGTCAGACGCATATGAGTTTTATAATTTCTTAGATGTGTGTTATTATAAACTATTGAGGGGAACAACGAATAGCAAGGACAAGTGTGGTTTTATAAGGATAAACAAGGAGTCTGTTGTACCATACACAGTGCGAGACAATCAAAAGTTTGTGCCGTTATTTTATTTTGAAGGTGAAACGGAGAATTTAAAGTTAAAAGCAGATCAGCTGAAAGGCTGGGACTTGTCGTATTTGAAGTTCTGTTGTAAAGTGCAGGGCATTAGGAACGAACTTTTTGCAAGTGAGACATGTTCTGTGATAAGTTTGAATGATATTAAGAGTTATTTTCCACCGGGAACTGAGTTTGAAGAGTATTGGCCCAATAAAGTGGTAGACTCCCAGCTCCTCATATCAGCGAAAGGATCAGTATCGGGTGGAGGACAATGGACGAGAGCACCGCCTGCGCCTCCCCCGGTGGTGGGTGGTGTGGCAGTGGGTTCGGCGGCCGGCCTCAACACCGTCAACAGCCAGTCGACACGAGGCCGCCGGGCCAACACACAGAGGCACACTCCTACCGCTGCCACCATGCAGATGTCCCACGCCGGACTATCGGCTGCCTCCGCTCAAGCGCTCGCCAACAGCTGGTCTCTGCCCGGAACTCTTACTCAGGCGCAAACGCAGCAAGTGCTCAGGTTTGCTCAGGCTCAAGTGGTGGCGCAGGCGGCCGCCCGGTACAACACGGCTGCCATCGCAGCGGCCGCCGGATTTCCACATAAATCGCAGCACCAGAGAAACGTTCAGTTTCCGAACAGTGCACTAACAATGGCGATGGGTCAGCAACCCCCTCCACCTCTTGTGAGGAGCACGGCCAACACAACAACTATGAAAGCCAGTATCTTAAAAGGCAATATTCCCTTTTTAGCTACGTATAATGGTTTTAAATATCCACAAAGACCAGTGGATTTGCCGGAATTGGATATTATTGCTGAGAGACTTATTTCACCAAGGCTTCCGTTTATGCAAATACGTAGATTACGCCATTTCAATGGTCAATTTGCTATAACTGGCCAAATAATTAATGTGCCTGTCTCGGTTGATAATATGATAAAACTTTTACCAAGGCCGCTTGATGGAAATGAAGAAGACTATTGTATTAATGTTCATATTAAGAAGAAACTTATTCATAAAACAAGTTACCTTCACGGATTGGTTAAAGGTATTGTCATTAAAAAATGGTTGACGTATTTAATTGAAACACCTCTGTATAAGCACTTCCAAATTAAAGTGGATGATGCTTGGTTTACATCCAATGGTGAGAAAGTCATAATTGATTACACGGATACAGGAGGATCGAGTAGACAAGATGATGTGCAAGAGCTTCCATCCTCTGAAACAGCAAATCACACTCACTCTGTGGATTCTGACTCCATAGAAAAACGAATACACATCGATGATTTAAGTGAACATATTGTGATTGATGAAAGTCTGACTGCGCAACAGCAAACTCTCATGTGGAGTGAGGATAAATTTTTACAAATTGCTCCAGGTGAAAATAAAGTTCCAGAGAGTTTGTTATTTGACACATATGCAGAGGAATTATCATTTCCAGCCATTTACCTTGGGGAATTTCGTGTATTTCGAGAAGAAGCCAATGTAACGCCATTCATGATGGCAACAAGTGAATTACGTCGTTCAGACAGGAGAGGAGTACTTCCTAATAAGCTTCTTTACACGGCAATGAAAATAATGCGCTTAAGAGTTTGCAGTGCTCTGAAGATTGGATTCAAACACATCGGTAAGGATACCAATATAAGTAAAGAACGCGTATTATCTGATGATTACATAAATGCCTGTTTGGAAACAAATTTAGCTTTTATGAAGTCAATCCCTAATTCTGCAACTTATTGGTCTGCGCGAAAGCGAGATCTTTTTGCAATGATGCGCCAGTTGGGTAGGCCAACTATGTTTTTGACCATAAGCGCGAATGAAATTGGATGGCCAAACCTTCTAAGGATTTTACACAAATTGAAAAATCAGGGAGAAGAGTTAACCGATGAGCAAATTGAAGTGTTGAATTATTTTCAAAAGACAACTCTGATTAATGATGATGCCGTCACCTGCGCAATATATTTCAATAAATTGATTAATGTAATCATGCTTATATTGCAGTCAAAGAAGTTGAGTCCATTTGGTAAATATCGAGTGAGTCATTATTTCAAGCGGATTGAATTTCAACATAGAGGTAGCCCACACGCCCATATACTATTATGGTTAGATAATTCACCAAAAGATGCATTGGGGAACGACTACGAAGAAGCGATTGCATTAATTAATTCGCTTATTTCAGTGGATTCATCTGAAGCTTCCGGTCACATCAAACTTCAAACTCATAAACACACCTTCACGTGTTATAAAAACACTCGTACAAATAATCGGCAATGTCGTTTTGAAGCACCTTTTATGCCTATTCGCCAAACTACTATTCTCATCCCGCTAGACAAGGAGAATCCAGAGTTACAAAGACTTAAATCGCGGTATAAAAATATACGACAAAACTTAGAAAGTAATGACTACGAAAATATTGAACATTTTTATCAAGACAATTGCATAATATCAGATGATGACTACGTTAACATTTTACGAGCTGGGATAACTCGGCCTCGAGTATTTTTAAAACGGAGACCTTCAGAAAAATGGCATAATTGTTTTAATCCTTTTATTTTGAACGTGGTTGGGTCTAATATGGACTTCCAATTTATCACCGAAGAATATTCATGTGCTCAGTACGTTGTCGACTACATAAATAAGACTAACAGAGGAATCAGTAACTTACAACAAAAACTCGTCGAAATTATGAATGATAATCCTGACTTCGACATTATTGCTGCTACAAAGAAACTTAGCGTCAACGCGCTGAATACAATTGAAATGTCAAGCCAGGAAGCAGCGTGGTTTCTTTTGCGTGAACCCATGTCTAAAGCGTCAGTAGCTATTGAATATATTCCAACATACTGGCCACAACAGCGAGAAAGAATTCGAAAAACATTAAAAGAATTAGCGCAACTTGAAGATGATGATACAAATGTATGGAAGGAAAATTGGTTCGACAAGTACGAGAAAAGACCTGCTATAATTAATGATATCACTCTAGCTCAGTTTGTTTCGCGATATACTGTCAATGCTGCCGGAAATGTTAAAGAACGAAAAGTCCCAAAAGTTATAAGATTCCGAAATTATGATATGGGGAAAGAGTTAACAGAATACAAGAGGGAAATGGTTACGCTACATATGCCTTTCAGAATTGAAGAAACTGATGTTTTGAGTGATATGAAGTTTTTGCGCATCTATGATGAAAATGAAGATCTCATAATGGAGAGACGAAAAGAATTTGAATCTAATTTAGATATCGCAAAAACAATGGAAATTTGTGCACAATTATGTCGGGAAGAGACGGAGCTCAACGATGTGCAGGCAAATAACGATGACCAGAACAGGGCTAATGTCCAAGAAATTCTAGATCCATACCAACAGTTTCTTCAAGATCCAAACTCGGTTATTAACGATGATTTAGTATCAGCTTCAATGAATAAACTCGGAGCGATATGGAAAAAAAAAGACAACCTCATGGAGACTCCAGAGTTTCTTGAGCTCATGAGAAGAACTAACGAGAAGCAATTCGAGCTGGCTCAACACATAATATGGTTATTGACTTCAAAAAACCCAATGCCGTTACAACTATTTTTGACTGGTCCTGCTGGATGTGGGAAAACTTTTCTCATCAGACTGATTATGGAAATTTGTAATAGATTCACAGATACAGATGGCTACTGCAATGCTTATCTTGTATGTGCATCCACTGGAAAAGCTGCGGTTGCTATTGGAGGTACAACTGTTCACACCGCTTTCAAAATTACTCTATCCAGTTTTCAAATACCTTTATCTAACGAAGTCAAGGGCTTGTACAGATGTTTATTCAAGTATGTAAAGATGATACTTATTGATGAAGTCAGTATGATAGGAGCAGAAATGTTAGAACGTATAGATTTGAGGTTGAAAGAAATAACCGGAAATTATGATACCTCTTTCGGTGGATTACATATTATTTTTATTGGTGATTTGAGACAATTGCCTCCAGTTAGAGCCACACCAATTTGGAAACAAAAAATTCAACGGATTGATGGTCAGCAGTTATGGAGAGGAATTAGTTTTTACGAGTTGACAGAAGTTATGCGCCAAGAAAATGCTCAATTTTCTTCATTATTGACAAAAATTGAAGGGGAAGCGGAGCAACGTTGTCCTGGAGGAATTCGATTATTTAATGACAACCATTCAGTTGATGCGTACAACTTGAAAGTGTTGAGTTCATCTGATGAAATATCAAATTCAGTTGCTGATGATGAATTTTTGGGGTGTGAAAATGATCGCGAAAAGCAAAGAGTTGCTAGAGAAAAGTTGTACAAACTTAGTACAATTGACACGGGAGGATTACCTTATGAAATTATTTTTGCTCCAGATAAACCCTACATGATAACGACCAATATTGATGTTGCTGACGGATTAGCCAATGGAGCGGTAGGCAAATTGATCCATGTTGAATTAGGTGTTGATGATAGAATTTTAAGAGTTTGGCTTCATTTTCCTAACGGCGTCGGTGTTAAAGCTCGAGCAAAAACAGCTGGATATGCGAATTCAAAAGGAATTGATAATACAGCGGTTCCTATCAATCGTAGAACTGCAACAATTCCTCTCAACCGGAACAAATCAATTCATGTCAAAAGAAATCATTTTCCGTTAAAACCAGCTTGCTCCTTAACCATTCATAAATCTCAAGGTGGAACTTTTGATGAAATAGTTTACAAGTACAGCAAAGCTCACTCACAGTCTTTAGTTTACGTAGCTTTATCTAGGGTTACGAGTCAACAAGGACTTTACATTGTATCTAGTGAAGATCAACGTTTTCACCATGGCAGACGTGAAAATCAAGCGATGCTTTTCGTGCCTCCGCAAGTGACCGGCACGATGAATGGCCACTCAACCTCTCACTCCGTGGACACTCGCAAAAGGCTTACACCGATACCAGACATCAACACTACTGGCAACCATACGCCGTATAAGGTACAAAAGGCGTTAGTGGAAAACACAATGGTGCCTTGCATCAATTCGAAGCCCTACCAGTACACGGAGCTGCTGATGACCCTGCCGGACCTCGCCAGCCACTTCTTCCCGCGCGTCTCGCTCACCACCTGCCGCGCCATGCTCGACGCGCTCGGACTCATTCTCTACCGGCCTAACTCAACCCAACTTCAAGTTCTGCGCAACTCTGGCAAGTGCAAGTCGGCGGCCGCCGGCGAGAACGGGATGGCGTTGGTTCAGGTCCGTGACGTCATGCATCACATGCTGCAGTTCAAGTACATGCTGCGCTCCGGGCTCGGGGACGACCCGGCCGCCCACCCGCCCCCCGCGCACCTGCACCCCCACGCCAAGCGCGCCAGGGCCAACTGA

Protein

MTDPMIKVKTERPDEAEIRELAAKMVEANKAKALAASVAATRTPPGGLVPPASGQMGILNFLTRKPGATGTTIDQRPAPDPEKKTPAPDEASWKGHFGWDVLGKCHIPYIFRSNEKYVAVRMVEIKLLNKYLNYLHADIYSCTCIRSYYITEIEARLLNEISNRHCDGQFGREAFTQKDLVVRLSDAYEFYNFLDVCYYKLLRGTTNSKDKCGFIRINKESVVPYTVRDNQKFVPLFYFEGETENLKLKADQLKGWDLSYLKFCCKVQGIRNELFASETCSVISLNDIKSYFPPGTEFEEYWPNKVVDSQLLISAKGSVSGGGQWTRAPPAPPPVVGGVAVGSAAGLNTVNSQSTRGRRANTQRHTPTAATMQMSHAGLSAASAQALANSWSLPGTLTQAQTQQVLRFAQAQVVAQAAARYNTAAIAAAAGFPHKSQHQRNVQFPNSALTMAMGQQPPPPLVRSTANTTTMKASILKGNIPFLATYNGFKYPQRPVDLPELDIIAERLISPRLPFMQIRRLRHFNGQFAITGQIINVPVSVDNMIKLLPRPLDGNEEDYCINVHIKKKLIHKTSYLHGLVKGIVIKKWLTYLIETPLYKHFQIKVDDAWFTSNGEKVIIDYTDTGGSSRQDDVQELPSSETANHTHSVDSDSIEKRIHIDDLSEHIVIDESLTAQQQTLMWSEDKFLQIAPGENKVPESLLFDTYAEELSFPAIYLGEFRVFREEANVTPFMMATSELRRSDRRGVLPNKLLYTAMKIMRLRVCSALKIGFKHIGKDTNISKERVLSDDYINACLETNLAFMKSIPNSATYWSARKRDLFAMMRQLGRPTMFLTISANEIGWPNLLRILHKLKNQGEELTDEQIEVLNYFQKTTLINDDAVTCAIYFNKLINVIMLILQSKKLSPFGKYRVSHYFKRIEFQHRGSPHAHILLWLDNSPKDALGNDYEEAIALINSLISVDSSEASGHIKLQTHKHTFTCYKNTRTNNRQCRFEAPFMPIRQTTILIPLDKENPELQRLKSRYKNIRQNLESNDYENIEHFYQDNCIISDDDYVNILRAGITRPRVFLKRRPSEKWHNCFNPFILNVVGSNMDFQFITEEYSCAQYVVDYINKTNRGISNLQQKLVEIMNDNPDFDIIAATKKLSVNALNTIEMSSQEAAWFLLREPMSKASVAIEYIPTYWPQQRERIRKTLKELAQLEDDDTNVWKENWFDKYEKRPAIINDITLAQFVSRYTVNAAGNVKERKVPKVIRFRNYDMGKELTEYKREMVTLHMPFRIEETDVLSDMKFLRIYDENEDLIMERRKEFESNLDIAKTMEICAQLCREETELNDVQANNDDQNRANVQEILDPYQQFLQDPNSVINDDLVSASMNKLGAIWKKKDNLMETPEFLELMRRTNEKQFELAQHIIWLLTSKNPMPLQLFLTGPAGCGKTFLIRLIMEICNRFTDTDGYCNAYLVCASTGKAAVAIGGTTVHTAFKITLSSFQIPLSNEVKGLYRCLFKYVKMILIDEVSMIGAEMLERIDLRLKEITGNYDTSFGGLHIIFIGDLRQLPPVRATPIWKQKIQRIDGQQLWRGISFYELTEVMRQENAQFSSLLTKIEGEAEQRCPGGIRLFNDNHSVDAYNLKVLSSSDEISNSVADDEFLGCENDREKQRVAREKLYKLSTIDTGGLPYEIIFAPDKPYMITTNIDVADGLANGAVGKLIHVELGVDDRILRVWLHFPNGVGVKARAKTAGYANSKGIDNTAVPINRRTATIPLNRNKSIHVKRNHFPLKPACSLTIHKSQGGTFDEIVYKYSKAHSQSLVYVALSRVTSQQGLYIVSSEDQRFHHGRRENQAMLFVPPQVTGTMNGHSTSHSVDTRKRLTPIPDINTTGNHTPYKVQKALVENTMVPCINSKPYQYTELLMTLPDLASHFFPRVSLTTCRAMLDALGLILYRPNSTQLQVLRNSGKCKSAAAGENGMALVQVRDVMHHMLQFKYMLRSGLGDDPAAHPPPAHLHPHAKRARAN

Catalytic Activity

ATP + H2O = ADP + H(+) + phosphate

Cofactor

Mg(2+)

Similarity

Belongs to the helicase family.

Uniprot

J9JYX1 B0WS82 B0WHR0 B0X370 B0W7Q6 B0X8F9 + More
B0XE87 B0X3H8 B0XBP3 B0WJB6 A0A1S3T8T3 A0A2H9T4X5 A0A1Y1NKE2 A0A226D8L9 A0A226F5N4 A0A1C7MZM0 A0A226F1P1 B0WH72 S2JVK3

EC Number

3.6.4.12

Pubmed

25384727 29150518 28004739

EMBL

ABLF02009660 ABLF02060474 DS232066 EDS33709.1 DS231939 EDS27927.1 + More
DS232310 EDS39572.1 DS231855 EDS38200.1 DS232488 EDS42495.1 DS232811 EDS45920.1 DS232315 EDS39870.1 DS232646 EDS44392.1 DS231958 EDS29051.1 NSIT01000220 PJE78258.1 GEZM01005450 JAV96167.1 LNIX01000030 OXA41097.1 LNIX01000001 OXA64511.1 LUGH01000897 OBZ82310.1 OXA63699.1 DS231933 EDS27530.1 KE123980 EPB86818.1

Proteomes

UP000007819 UP000002320 UP000087766 UP000198287 UP000093000 UP000014254 + More

Pfam

PF14214   Helitron_like_N        + More
PF05970   PIF1
PF02689   Herpes_Helicase
PF04843   Herpes_teg_N
PF13538   UvrD_C_2
PF02801   Ketoacyl-synt_C
PF00443   UCH
PF08659   KR
PF14765   PS-DH
PF00109   ketoacyl-synt
PF16197   KAsynt_C_assoc
PF00107   ADH_zinc_N
PF00698   Acyl_transf_1
PF02902   Peptidase_C48
PF14529   Exo_endo_phos_2

Interpro

IPR010285   DNA_helicase_pif1-like        + More
IPR025476   Helitron_helicase-like
IPR027417   P-loop_NTPase
IPR036691   Endo/exonu/phosph_ase_sf
IPR003840   DNA_helicase
IPR000014   PAS
IPR035965   PAS-like_dom_sf
IPR038765   Papain-like_cys_pep_sf
IPR006928   Herpes_teg_USP
IPR003653   Peptidase_C48_C
IPR027785   UvrD-like_helicase_C
IPR016039   Thiolase-like
IPR001394   Peptidase_C19_UCH
IPR014030   Ketoacyl_synth_N
IPR020843   PKS_ER
IPR013968   PKS_KR
IPR002364   Quin_OxRdtase/zeta-crystal_CS
IPR020801   PKS_acyl_transferase
IPR029063   SAM-dependent_MTases
IPR020841   PKS_Beta-ketoAc_synthase_dom
IPR001227   Ac_transferase_dom_sf
IPR020807   PKS_dehydratase
IPR036736   ACP-like_sf
IPR014031   Ketoacyl_synth_C
IPR016035   Acyl_Trfase/lysoPLipase
IPR028889   USP_dom
IPR013149   ADH_C
IPR032821   KAsynt_C_assoc
IPR011032   GroES-like_sf
IPR042104   PKS_dehydratase_sf
IPR014043   Acyl_transferase
IPR036291   NAD(P)-bd_dom_sf
IPR005135   Endo/exonuclease/phosphatase
IPR003593   AAA+_ATPase

SUPFAM

SSF52540   SSF52540        + More
SSF56219   SSF56219
SSF55785   SSF55785
SSF54001   SSF54001
SSF50129   SSF50129
SSF53335   SSF53335
SSF47336   SSF47336
SSF53901   SSF53901
SSF52151   SSF52151
SSF51735   SSF51735

Gene 3D

3.60.10.10 1.10.1200.10 3.10.129.110 3.40.366.10 3.40.47.10

CDD

cd00130 PAS

ProteinModelPortal

J9JYX1 B0WS82 B0WHR0 B0X370 B0W7Q6 B0X8F9 + More
B0XE87 B0X3H8 B0XBP3 B0WJB6 A0A1S3T8T3 A0A2H9T4X5 A0A1Y1NKE2 A0A226D8L9 A0A226F5N4 A0A1C7MZM0 A0A226F1P1 B0WH72 S2JVK3

PDB

5FTF E-value=2.68464e-22, Score=267

KEGG

105841473 no KO assigned | (RefSeq) uncharacterized LOC105841473

GO

GO:0005524 GO:0006281 GO:0006310 GO:0000723 GO:0003678 GO:0016021 GO:0008234 GO:0008270 GO:0016740 GO:0016579 GO:0016491 GO:0036459 GO:0016020 GO:0009156 GO:0044249 GO:0003677 GO:0004879 GO:0003707 GO:0016286

Length:

2009

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.766729999999997

Exp number, first 60 AAs:

0.02662

Total prob of N-in:

0.00305

outside

1 - 2009

Pi

2.054805

Theta

26.217929

Tajima's D

-1.403523

CLR

124.181699

CSRT

0.0745462726863657

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree