Silkworm Genome Informatics Database

Gene

KWMTBOMO12724

Pre Gene Modal

BGIBMGA007181

Annotation

PREDICTED:_A-kinase_anchor_protein_17A_[Bombyx_mori]

Location

Bomo_Chr21(-):13381241-13396625 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.011

CDS

ATGATCCAACCTGAGAGTTTTTCATTGTTAAAAGTGTCGAAACATAGTTCGGAAGTGATCAGATTTGATGCGGAAATAGAAAATTATAGTATGCTAAAGATGGTGATTATGAGACTTGATGAACGTGTGGTGAAGTTGAATGATTACCCGGAGCCCTTAAGAGTGAAAGTTTGTGAAGCGAAGTCGGATTTCCCTTCTCGTCACGCTTGGGACTCGTTCTTTCGAGATGCGTCCGATATGGATGAGATGAAGCCAGGAGAAAGACCAGACACTATTCATATATCAAACCTGCCAATACGTTGGTTTGTTCATAAAAATGAACGGGATGAAGATGCGATGCCTTCTGAGAGCTTATTCAAAAAGGTCTTTGAAAAGTTTGGTAGGGTACGTCAAGTGGACATACCTATTGCTGATCCATTTAGACTTCAAATGAAATCAGCCATCAGAGGCATCATGTATCCAACAGAAGATGCAGCTGTGTATTTTGAAGGATACGTACAGTTTAATGAATATGTCGGTTTCGTCAGATGTATGGATGAATTGAGAGGCAAGAAATTAGTTAGAAAGCAGGATGACATTGCCGAGTGGTGTAGCATCAGGGTTGATTTTGATAAGACAAAGCACATGACTGATGCAGCCATCAAGAGAAGGGCTATAGTTAGAGAAAGACTTGCAGCACGAAAGAGTCACAAAGAGGAAGAAGAACAAGCGGAAAAATTGAAAGCTGCTAAAAGAGAAGCAAAGGAAAGACAAAAATATGAATTGGCTGAAAAAGAGAAATTGGAGAAGATGAGGCAAAGAGAAGAAAGGAGAAAGAAAAAGCAACTTGCCAAACTAATGGAGAGAGACAATGTAGACCTGAATAGCAAAGTGGCAGAAGAACAGAAGAAGTTATTGAAAGCTCAAAAAAAGTTACAAGCCATTAGGCTAGTTGCAGAATTGTTTAAGAGAATTGAGCTCCGTCCAGAACTACAGCGTAATGGTGCTAAAACTCACAGAGCATACAATGAAAGCTTGAGGGCTCGTGTCGTAGAAAAGTTCAAAAGGCAACAAGAAGAATTGTTGGAAGCACAAAGGAAGAATCTCAGAAGCGCACTTGATGGTCGTATAGTGATCCGTTCAGCTTTAGAAACGAAGAAGCCGAGACGTACCTCTTCCCTCAGCTCTCTATCGGCTGACGAAGAAAATCAACTACGAATAAAAACAGAAAGAATCCCAAGTCCGGACTCGAGAATGCAATATGATAAAACACCTGTTCCTGCGATGTACGGGATGGCGAACCCTTACAGCTTCGGGTACCCGGCGTTCATGCCGCCAGGATATGCCTATGGACCGCAAAGTTCAATGTACTACCCCCGCGCGGCGTACCCTGCGGAGTGGGCGCGGCGCGCGGGCGGGGCGCGGGGGCGCGGGCGCGGCGTGCGGGGGCGCGGGGGGGCGCGGCCGCGGATGCCGTACTTCGACGGACCGGACGCCACCGCGCAGTACTACAGATACTTCAAGAAGCTGAAGGAATCCAACGAACACGACGACCGGCTGCATTCTCGCTCCCGCTCTCGGTCCCGCTCCCGCTCCCGCCGCCGCTCGTACACCCGCTCCCGCTCCCGCCGCCGCTCATACTCCAGGTCGAGGTCTCGTTCAAGGAGATCCAGATCTAGGAGTCGTTCCAGGAGTCGTTCAAAGAGCAGAAGCAGACGGTCTTATTCCAAGAGTAGGAGATCTAGGTCCTACCACGACCGCTCCAGTTCTCGGTCGCGGAAGCGTTCCAAGTCACGGAGCAGATCCAGAACCCCTGCATCAAAACGTTCGACGAGAGGTACCGGTGGAGAGGGAAGAAGTCCTCCAGTCCAGAATATCGACTCCAGGCAGCGTGTGTCGCCTGTGCCTCAGGAGGCGACGAATGGTCCGACCGACGGCTGGTCACCTTCCAAAGGCGATGAGAGATGGTCTTCCAGTCCCAAGGAGCAGTGA

Protein

MIQPESFSLLKVSKHSSEVIRFDAEIENYSMLKMVIMRLDERVVKLNDYPEPLRVKVCEAKSDFPSRHAWDSFFRDASDMDEMKPGERPDTIHISNLPIRWFVHKNERDEDAMPSESLFKKVFEKFGRVRQVDIPIADPFRLQMKSAIRGIMYPTEDAAVYFEGYVQFNEYVGFVRCMDELRGKKLVRKQDDIAEWCSIRVDFDKTKHMTDAAIKRRAIVRERLAARKSHKEEEEQAEKLKAAKREAKERQKYELAEKEKLEKMRQREERRKKKQLAKLMERDNVDLNSKVAEEQKKLLKAQKKLQAIRLVAELFKRIELRPELQRNGAKTHRAYNESLRARVVEKFKRQQEELLEAQRKNLRSALDGRIVIRSALETKKPRRTSSLSSLSADEENQLRIKTERIPSPDSRMQYDKTPVPAMYGMANPYSFGYPAFMPPGYAYGPQSSMYYPRAAYPAEWARRAGGARGRGRGVRGRGGARPRMPYFDGPDATAQYYRYFKKLKESNEHDDRLHSRSRSRSRSRSRRRSYTRSRSRRRSYSRSRSRSRRSRSRSRSRSRSKSRSRRSYSKSRRSRSYHDRSSSRSRKRSKSRSRSRTPASKRSTRGTGGEGRSPPVQNIDSRQRVSPVPQEATNGPTDGWSPSKGDERWSSSPKEQ

Uniprot

A0A2A4JJ25 A0A2A4JKP5 A0A2W1BK19 A0A194QG80 A0A0N1PFJ0 A0A0T6AW49 + More
A0A182YK78 A0A1Y1LYN0 A0A1Y1M0T3 A0A1A9XQ82 A0A1B0FJW9 A0A1A9UME4

Pubmed

28756777 26354079 25244985 28004739

EMBL

NWSH01001254 PCG71971.1 PCG71972.1 KZ150005 PZC75228.1 KQ458981 + More
KPJ04497.1 KQ460882 KPJ11502.1 LJIG01022703 KRT79147.1 GEZM01043957 JAV78639.1 GEZM01043958 JAV78638.1 CCAG010007912

Proteomes

UP000218220 UP000053268 UP000053240 UP000076408 UP000092443 UP000092444 + More
UP000078200

Pfam

PF00089 Trypsin

Interpro

IPR009003   Peptidase_S1_PA        + More
IPR001254   Trypsin_dom
IPR035979   RBD_domain_sf
IPR012677   Nucleotide-bd_a/b_plait_sf

SUPFAM

SSF50494 SSF50494 + More
SSF54928 SSF54928

Gene 3D

3.30.70.330

ProteinModelPortal

A0A2A4JJ25 A0A2A4JKP5 A0A2W1BK19 A0A194QG80 A0A0N1PFJ0 A0A0T6AW49 + More
A0A182YK78 A0A1Y1LYN0 A0A1Y1M0T3 A0A1A9XQ82 A0A1B0FJW9 A0A1A9UME4

KEGG

101741711 K13169 splicing factor, arginine/serine-rich 17 | (RefSeq) A-kinase anchor protein 17A

GO

GO:0004252 GO:0016301 GO:0003676 GO:0000166 GO:0006508 GO:0020037 GO:0016020 GO:0009156 GO:0044249 GO:0003677 GO:0004879 GO:0003707 GO:0016286

Length:

656

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01551

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00006

outside

1 - 656

Pi

18.894012

Theta

24.195104

Tajima's D

-1.051404

CLR

138.837154

CSRT

0.122793860306985

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics