The Silkworm Genome Information Database

Gene

KWMTBOMO12714

Pre Gene Modal

BGIBMGA014401

Annotation

PREDICTED:_uncharacterized_protein_LOC101744180_[Bombyx_mori]

Location

Bomo_Chr21(+):12747892-12754990 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.26

CDS

ATGGATACTGAAACTTTAAAAGAAACAACCCTGAAAACCCAAGATGATCAAAAAGAAAAATTTAAAAATGAACACACAGAATCTTCAATACACAAAGAGATAAATGAAACTGTTCAGTCAGGAAACCGAGATTATACAAATCGACCGTTAAAACGATATAGGAATAGGGTTTCTCGGCGTTGGAAAAGACTTAGAAAAGATATCCCAGGGGCAAAAAACACAGCAGACTTTAAAAGAGCAAAAGAAAACACTTTTTATGACAGCTCTTCAGATGAAAGCAGCGAGGAATATTCATTAACTGTATCCAAAATACCAAGTACATGGACATATTTAGAAATAAAAAATTATATTCAAAAAGAGTGTGGTCCCGTTGAAGACCTAACACTACTAAAAGATCAAGGAGGGCATGGATCTATTCGACTTACATACCAAGATGAGAAAGATTGTAAATATGCAATGGAAATTTTACAGAATAAAATAATAGAAGGAAATAAACTTGAAGTTGTAATGGAAGTTAGTTCTATCAGCGATCCAACTTCAGAAACAGAAAATAGAATGTCATGGATAAACTCCTTAGATCTGTGGGAAAATGACGAAGAAGGTCTGTACGGATTGAAACCGGAGTTCCTCAAGTTTCTTGGCATAACACCCCCCATAGACAAATGGGTGCATGTGACTAATTTTAGGTGCGATAAAACGGAGCTACGCGATGTGATGGAGCTTGCCGGTCAAGTGCTGATATGCTCTGTGGTGACGATAGCCAACAGATACGCGAAGGTCATGTACAGCCATCCCCTTGAAGCAGTACAGGCAGTGTCCATGTTAAATGGTCAGATGCTGTACGGAAACCCGTTAAATGTAAAGATTGAGAGGAATCCTACTGACACCGTCACACTGCCCAAGGGTCTTGCCGCTGTGGGCTTAGGTTTGGGGAAAAGGGGGGTACCATTGAGAAATATAGTTCAACATTACGAAAGATTTATAAATAACAAAAGCTCAATGATTAATCCTTCGATTTTAAGTGGTCCTGATTTAATTTTAGCCGAGAATTCGAATGACGTAGGTGTAATTAGTACCAATAATAATGACAGTAACAGGACGTTGAATCACACGGCTTGTGGTCAGAATACAATGGCATCTTTCCCAAGATTTACGGTACCCAATCCACTGAATCAAACGGGTCAATCTCGGGCTACAGTAGCCCAAAATATTCGCCCCCATCAGCCAATTATACCAAAACCCCCACAAATACCCTCAAATATGGGCCAAGAAATGAAATTGAATTCCGGGCCACAAATGAATACCGGATTCGTGAACGGACCAATCTCAGCCCAAAATCATATTCGGCCAATGGTATGGCCGCAGTTTGGTGATTCCCCCAGCACCTCTGGCACATTACCACCGAGGCAACAGATGATGCCACGGCCTCATATCGCGCCCGGTGCTCTGCGTGGACCCGGACAAATGATTCGACCAATGTTGGCGCCAACAGATCCACGACCAAGGCCGGTAATGCCACAAATGCCTCCCAGACCGATATCTGCAACTGTGCAGCTAAACAACTTACCTTCATCGATAACAATGCCAATGCTGTGCGAGAAGTTGTCGCAATCGGGCGAAATTTTGTCCCTTCAGTTCACGGCGCCTGGTTGTGCTGTAGTCAGATTCGCGAATCCACCGCAAGCCGAAAGATGTTTTCACCAATTGAACAGGACTCAGGTGAGCGGACATGTTTTGGACGTAAGAATAGTCTGA

Protein

MDTETLKETTLKTQDDQKEKFKNEHTESSIHKEINETVQSGNRDYTNRPLKRYRNRVSRRWKRLRKDIPGAKNTADFKRAKENTFYDSSSDESSEEYSLTVSKIPSTWTYLEIKNYIQKECGPVEDLTLLKDQGGHGSIRLTYQDEKDCKYAMEILQNKIIEGNKLEVVMEVSSISDPTSETENRMSWINSLDLWENDEEGLYGLKPEFLKFLGITPPIDKWVHVTNFRCDKTELRDVMELAGQVLICSVVTIANRYAKVMYSHPLEAVQAVSMLNGQMLYGNPLNVKIERNPTDTVTLPKGLAAVGLGLGKRGVPLRNIVQHYERFINNKSSMINPSILSGPDLILAENSNDVGVISTNNNDSNRTLNHTACGQNTMASFPRFTVPNPLNQTGQSRATVAQNIRPHQPIIPKPPQIPSNMGQEMKLNSGPQMNTGFVNGPISAQNHIRPMVWPQFGDSPSTSGTLPPRQQMMPRPHIAPGALRGPGQMIRPMLAPTDPRPRPVMPQMPPRPISATVQLNNLPSSITMPMLCEKLSQSGEILSLQFTAPGCAVVRFANPPQAERCFHQLNRTQVSGHVLDVRIV

Uniprot

H9JXY3 A0A2A4K4A5 A0A0N1IH91 N6U4Y9 U4UK15 A0A1W4W7F8 + More

Pubmed

19121390 26354079 23537049

EMBL

BABH01041166 NWSH01000145 PCG79091.1 KQ460622 KPJ13514.1 APGK01039481 + More
APGK01039482 KB740970 ENN76660.1 KB632241 ERL90536.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000019118 UP000030742 UP000192223 + More

PRIDE

H9JXY3

Pfam

PF00076 RRM_1

Interpro

IPR035979   RBD_domain_sf        + More
IPR000504   RRM_dom
IPR012677   Nucleotide-bd_a/b_plait_sf

SUPFAM

SSF54928 SSF54928

Gene 3D

3.30.70.330

ProteinModelPortal

H9JXY3 A0A2A4K4A5 A0A0N1IH91 N6U4Y9 U4UK15 A0A1W4W7F8 + More

PDB

2DH9 E-value=4.66384e-05, Score=113

KEGG

101744180 no KO assigned | (RefSeq) uncharacterized LOC101744180

GO

GO:0003676 GO:0003723 GO:0000166 GO:0005737 GO:0006397 GO:0009156 GO:0044249 GO:0003677 GO:0004879 GO:0003707 GO:0016286

Length:

584

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0275

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00321

outside

1 - 584

Pi

16.790497

Theta

22.351954

Tajima's D

-1.455965

CLR

2.384622

CSRT

0.0655967201639918

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics