Gene

KWMTBOMO12709  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001386

Annotation

phosphoribosyl_pyrophosphate_synthetase_[Bombyx_mori]

Location

Bomo_Chr21(-):12663839-12665011      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.728

CDS

ATGCCGAACATCAAAGTTTTTAGCGGCAGCTCGCATCCTGATCTGGCTCAAAAGATTGTCGACCGTTTGGGCATCGATCTCGGTAAAGTTGTAACCAAAAAATTCAGTAATATGGAAACGTGCGTTGAAATAGGAGAATCGGTACGCGGCGAAGATGTGTACATCGTACAAAGCGGCAGCGGAGAGATCAACGACAACCTAATGGAGCTCCTGATTATGATTAACGCTTGTAAAATAGCGTCTGCATCGCGAGTGACCGCCGTCATACCTTGCTTCCCGTACGCGCGGCAAGACAAAAAAGACAAGAGCAGAGCCCCGATCACGGCCAAACTCGTTGCCAACATCCTTTCAGTGTCTGGAGCCGATCACATCATCACTATGGATCTTCATGCGTCGCAAATTCAAGGATTCTTTGATATTCCGGTAGATAACCTCTTTGCCGAACCCGCAGTGTTAAAATGGATCAAAGAAAACATACCGGACTGGAAAACAAGCATTGTTGTGTCCCCTGATGCTGGTGGTGCTAAAAGGGTGACATCTATTGCAGATCGTTTGAATGTTGAATTTGCTTTGATCCACAAAGAGAGAAAGAAGGCCAATGAAGTAGCCTCTATGGTGCTTGTTGGTGATGTTAAAGACAGAACTGCCATTTTAGTAGACGACATGGCCGACACTTGTGGCACGATTTGCCATGCTGCCGAAAAATTGATAGAAGCTGGTGCTACTAAAGTGTATGCTATTTTGACTCATGGTATTTTTTCGGGACCTGCAATATCCAGAATTAACAATGCTTGTTTAGAAGCTGTTGTTGTCACAAACACAATACCCCAGGAGAGGCACATGCAAGAATGTCCAAAAATACAATGCATTGACGTGTCAATGATGCTGGCAGAGGCTGTCAGACGTACACACAATGGGGAATCTGTTTCATACCTCTTCTCTAATGTTCCATATTAG

Protein

MPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSGEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPITAKLVANILSVSGADHIITMDLHASQIQGFFDIPVDNLFAEPAVLKWIKENIPDWKTSIVVSPDAGGAKRVTSIADRLNVEFALIHKERKKANEVASMVLVGDVKDRTAILVDDMADTCGTICHAAEKLIEAGATKVYAILTHGIFSGPAISRINNACLEAVVVTNTIPQERHMQECPKIQCIDVSMMLAEAVRRTHNGESVSYLFSNVPY

Uniprot

H9IVV5   Q2F5M9   A0A2A4JUX7   A0A212ERK4   A0A2H1W2N3   S4PL21   + More
A0A0N0PEY1   A0A194QC00   A0A0L7K4M4   A0A0K8TU93   A0A1Y1NFA1   A0A411G6I3   A0A1B6G9D4   A0A2J7PHH9   A0A1B6HZC8   A0A1B6MVD9   U5EZ78   A0A158NTP9   A0A1B6D970   A0A154P910   A0A2H8TYA7   A0A151I051   A0A151IY24   A0A182NNI7   A0A182QBZ0   V9IFV4   A0A182YPI2   A0A1I8P4F3   A0A182PT00   A0A182RKK1   Q7Q989   A0A182UM05   A0A182LI08   A0A1S4EAD2   A0A3B0JX81   A0A0M4EYQ0   A0A182JVK6   A0A1L8E9U5   Q0IFT8   A0A0L0CDS4   A0A1L8E345   A0A0Q9XK55   A0A0P8ZTR9   A0A182WCT5   A0A1W4UKL4   A0A0J9RSH8   A0A0R3P8W1   A0A0R1DZV7   A0A0Q5UIJ1   Q9VT32   A0A0J9RSB7   A0A1Q3G3F0   A0A0R1DZQ8   A0A0Q9WPJ2   A0A0Q5U6A4   W5J2J7   A0A023EQH6   A0A3B0JPB4   A0A0K8W0G1   A0A1B6G8I9   A0A0K8TD41   A0A146KXH5   W8CDN9   A0A1B6MLL1   A0A0A9WS51   A0A1L8E2H0   A0A1B6K4U4   A0A034WPY7   A0A2J7PHI6   A0A0A1XAH4   T1PAZ6   A0A1I8MLU4   A0A0C9R8X5   A0A1B6FBZ2   A0A1W4UKH4   A0A0Q9WZY5   M9PEY1   A0A0R3P7A3   A0A1B0FPW5   A0A0J9RSU8   M9PEP5   A0A0R1DWH0   A0A0Q9WPG2   A0A0Q9XPZ3   A0A1Y1NF70   A0A1L8E2Q7   T1DKG6   A0A0R3P759   A0A1B6GKE6   A0A0J9RTW5   A0A1I8MLU5   M9PHW7   A0A0R3P7G5   A0A1B6KCY2   A0A1B6I0W6   E2B1Y4   A0A0P5KCA7   A0A336KN82   A0A2J7PHI9   A0A0C9R2G6  

Pubmed

19121390    22118469    23622113    26354079    26227816    26369729    + More
28004739    21347285    25244985    12364791    14747013    17210077    20966253    17510324    26108605    17994087    22936249    15632085    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20920257    23761445    24945155    26483478    26823975    24495485    25401762    25348373    25830018    25315136    20798317   

EMBL

BABH01006661    DQ311394    ABD36338.1    NWSH01000587    PCG75488.1    AGBW02013021    + More
OWR44084.1    ODYU01005874    SOQ47206.1    GAIX01004255    JAA88305.1    KQ459762    KPJ20127.1    KQ459193    KPJ03078.1    JTDY01010841    KOB57961.1    GDAI01000088    JAI17515.1    GEZM01003767    JAV96582.1    MH365679    QBB01488.1    GECZ01010727    JAS59042.1    NEVH01025136    PNF15791.1    GECU01027694    JAS80012.1    GEBQ01000106    JAT39871.1    GANO01001284    JAB58587.1    ADTU01026081    ADTU01026082    GEDC01015075    JAS22223.1    KQ434846    KZC08389.1    GFXV01007085    MBW18890.1    KQ976639    KYM78823.1    KQ980780    KYN13201.1    AXCN02001913    JR040569    AEY59189.1    AAAB01008905    EAA09706.4    OUUW01000002    SPP77331.1    CP012525    ALC43675.1    GFDG01003292    JAV15507.1    CH477294    EAT44443.1    JRES01000534    KNC30386.1    GFDF01001169    JAV12915.1    CH933809    KRG06202.1    CH902618    KPU77914.1    CM002912    KMY98728.1    CH379070    KRT09055.1    CM000159    KRK00850.1    CH954178    KQS43722.1    AE014296    AY071526    AAF50223.2    AAL49148.1    KMY98726.1    GFDL01000717    JAV34328.1    KRK00849.1    CH963847    KRF97767.1    KQS43724.1    ADMH02002184    ETN57966.1    JXUM01051082    JXUM01051083    JXUM01051084    JXUM01054183    JXUM01054184    GAPW01002263    KQ561809    KQ561674    JAC11335.1    KXJ77466.1    KXJ77836.1    SPP77330.1    GDHF01007661    JAI44653.1    GECZ01011019    JAS58750.1    GBRD01002343    GBRD01000234    JAG63478.1    GDHC01018887    GDHC01006179    JAP99741.1    JAQ12450.1    GAMC01001616    JAC04940.1    GEBQ01003137    JAT36840.1    GBHO01035944    GBHO01035940    GBHO01015995    GBHO01004667    GBHO01004659    JAG07660.1    JAG07664.1    JAG27609.1    JAG38937.1    JAG38945.1    GFDF01001210    JAV12874.1    GECU01001239    JAT06468.1    GAKP01002712    JAC56240.1    PNF15792.1    GBXI01006376    JAD07916.1    KA645869    AFP60498.1    GBYB01004625    JAG74392.1    GECZ01022027    JAS47742.1    KRF97768.1    AGB94335.1    AHN58037.1    KRT09058.1    CCAG010001377    CCAG010001378    CCAG010001379    KMY98732.1    AGB94338.1    KRK00846.1    KRF97766.1    KRG06200.1    GEZM01003766    JAV96583.1    GFDF01001120    JAV12964.1    GAMD01000951    JAB00640.1    KRT09063.1    GECZ01006845    JAS62924.1    KMY98729.1    AGB94336.1    KRT09057.1    GEBQ01030680    JAT09297.1    GECU01027156    JAS80550.1    GL445000    EFN60301.1    GDIQ01186318    JAK65407.1    UFQS01000501    UFQT01000501    SSX04443.1    SSX24807.1    PNF15793.1    GBYB01002185    JAG71952.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000037510    + More
UP000235965    UP000005205    UP000076502    UP000078540    UP000078492    UP000075884    UP000075886    UP000076408    UP000095300    UP000075885    UP000075900    UP000007062    UP000075903    UP000075882    UP000079169    UP000268350    UP000092553    UP000075881    UP000008820    UP000037069    UP000009192    UP000007801    UP000075920    UP000192221    UP000001819    UP000002282    UP000008711    UP000000803    UP000007798    UP000000673    UP000069940    UP000249989    UP000095301    UP000092444    UP000000311   

PRIDE

H9IVV5    Q2F5M9    Q9VT32    M9PEY1    M9PEP5    M9PHW7    + More

Pfam

PF13793   Pribosyltran_N        + More
PF14572   Pribosyl_synth

Interpro

IPR029057   PRTase-like        + More
IPR005946   Rib-P_diPkinase       
IPR037515   Rib-P_diPkinase_bac       
IPR000836   PRibTrfase_dom       
IPR029099   Pribosyltran_N       
IPR000842   PRib_PP_synth_CS       

SUPFAM

SSF53271   SSF53271       

CDD

cd06223  PRTases_typeI

ProteinModelPortal

H9IVV5   Q2F5M9   A0A2A4JUX7   A0A212ERK4   A0A2H1W2N3   S4PL21   + More
A0A0N0PEY1   A0A194QC00   A0A0L7K4M4   A0A0K8TU93   A0A1Y1NFA1   A0A411G6I3   A0A1B6G9D4   A0A2J7PHH9   A0A1B6HZC8   A0A1B6MVD9   U5EZ78   A0A158NTP9   A0A1B6D970   A0A154P910   A0A2H8TYA7   A0A151I051   A0A151IY24   A0A182NNI7   A0A182QBZ0   V9IFV4   A0A182YPI2   A0A1I8P4F3   A0A182PT00   A0A182RKK1   Q7Q989   A0A182UM05   A0A182LI08   A0A1S4EAD2   A0A3B0JX81   A0A0M4EYQ0   A0A182JVK6   A0A1L8E9U5   Q0IFT8   A0A0L0CDS4   A0A1L8E345   A0A0Q9XK55   A0A0P8ZTR9   A0A182WCT5   A0A1W4UKL4   A0A0J9RSH8   A0A0R3P8W1   A0A0R1DZV7   A0A0Q5UIJ1   Q9VT32   A0A0J9RSB7   A0A1Q3G3F0   A0A0R1DZQ8   A0A0Q9WPJ2   A0A0Q5U6A4   W5J2J7   A0A023EQH6   A0A3B0JPB4   A0A0K8W0G1   A0A1B6G8I9   A0A0K8TD41   A0A146KXH5   W8CDN9   A0A1B6MLL1   A0A0A9WS51   A0A1L8E2H0   A0A1B6K4U4   A0A034WPY7   A0A2J7PHI6   A0A0A1XAH4   T1PAZ6   A0A1I8MLU4   A0A0C9R8X5   A0A1B6FBZ2   A0A1W4UKH4   A0A0Q9WZY5   M9PEY1   A0A0R3P7A3   A0A1B0FPW5   A0A0J9RSU8   M9PEP5   A0A0R1DWH0   A0A0Q9WPG2   A0A0Q9XPZ3   A0A1Y1NF70   A0A1L8E2Q7   T1DKG6   A0A0R3P759   A0A1B6GKE6   A0A0J9RTW5   A0A1I8MLU5   M9PHW7   A0A0R3P7G5   A0A1B6KCY2   A0A1B6I0W6   E2B1Y4   A0A0P5KCA7   A0A336KN82   A0A2J7PHI9   A0A0C9R2G6  

PDB

3S5J     E-value=3.12966e-160,     Score=1449

KEGG

692963    K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] | (RefSeq) phosphoribosyl pyrophosphate synth

PATHWAY

00030    Pentose phosphate pathway - Bombyx mori (domestic silkworm)
00230    Purine metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01200    Carbon metabolism - Bombyx mori (domestic silkworm)
01230    Biosynthesis of amino acids - Bombyx mori (domestic silkworm)

GO

GO:0009116   GO:0009156   GO:0004749   GO:0009165   GO:0000287   GO:0016301   GO:0016021   GO:0044249   GO:0003677   GO:0004879   GO:0003707   GO:0016286  

PANTHER

PTHR10210  

Length:

318

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.06107

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01000

outside

1  -  318

 

 

Pi

8.646263

Theta

12.486959

Tajima's D

-0.81809

CLR

0.551644

CSRT

0.171341432928354

Interpretation

Uncertain