SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12707  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002150
Annotation
PREDICTED:_ankyrin_repeat_domain-containing_protein_12_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.441
 

Sequence

CDS
ATGGAAGTCGGCGCTGTTAAACAAGCATTCAATAATGAGCTGATTCTTATGAAGAAAAGTTTAAATCAAGCCAAGACTCATACTATACACAAATTGACTAGAAAAGCTAAAACATTAACTGAAAAGAAAACTTCAGAGAAACTTAAGCAAAAACTTACAAGGAAAGCAGAGCTTGCTGTAAAAGAAGTTTTAGAAATAAAGAAAATCAAGCCTAGAGATGTGGCTAAATTTGCCATAACACACACCGGAGAACTGAAAAACTATTTGAACAAGCCAACGGTAGACCAAGAACGGGTCTGCTCTAGACTTCTCCTCCACAAATCTATGCAAGAAAAATACAAAATTATAAGACGTAGATTTGCTAACATACCAATAAGGGATCTATTCATGTCAAGACAAGAACGATTAAAATTGAAAAAGGAAGAAAAAGAAAAGAAGAAACATAAGAAAGAACTTAAAAACAGAAAGACTAGTAATTCAGGCGACTGGGATATTGAAGAAATTAACACTAGCAATGAACATATAGTAACTGAAAATGGTAACTCTGATTTATCTAATGAGCATGATATTATAAACGGTAGCAATAAACCCTCCGATATAGAAGAGGAAAGTGAAATTGAATCTGAAAGTAAACATGATAATGCTGCAAGCGAACTTGAAAATGAAGTGGATGATAGTGAGCAAATTAACATTAAATCACTAGAAAGTAAAGAACTGCCTACGCATAAAATAAAAGACTATAATAATATATCAGATTTACCTTTGCCTAAAAAGAAAGAAACAAAACAAAAACCAGTAAAGAAACAAAAAGAAAACAAAAATAAGAATTTGAATGAAAAGCTGTCACAAAGAAAGTTCAAAAAGGATACCGATGTAACTCAGTTAGTTGAAAATAAAATAGTTGACCCATTCTTTATTACTTCGACTGGTGAAAATTACATGTCTGTGGCTGAACCCAGACAACCGGATGAATTCAAAGAAATTCATAGACAAGGGAACAGAAAATTGAGAAGGGCGGCCATGTTTGGTCATGTCCCAAAAATTAAACCCAGACGAAATAATTATGAAGGAAATAACTTTAATACAAATAATTTCAGTAGAAATAGGGAGGAAGATTTTAGCACCAAATCAAGTGGAAGGTTTGATAATAGTAAACCATCTAATTTCAACTATAAAGATAATGATAATAAAAAAACATTTGGTGGTAAAAATGAGGATGTTGCAAAGAAAGAGGAAAAATTACATCCATCTTGGGAAGCCAAAAAAAAGCAATCTGGTATACTACCATTCCAAGGGAAGAAGATTGTATTCGACGAAAGTTAA
Protein
MEVGAVKQAFNNELILMKKSLNQAKTHTIHKLTRKAKTLTEKKTSEKLKQKLTRKAELAVKEVLEIKKIKPRDVAKFAITHTGELKNYLNKPTVDQERVCSRLLLHKSMQEKYKIIRRRFANIPIRDLFMSRQERLKLKKEEKEKKKHKKELKNRKTSNSGDWDIEEINTSNEHIVTENGNSDLSNEHDIINGSNKPSDIEEESEIESESKHDNAASELENEVDDSEQINIKSLESKELPTHKIKDYNNISDLPLPKKKETKQKPVKKQKENKNKNLNEKLSQRKFKKDTDVTQLVENKIVDPFFITSTGENYMSVAEPRQPDEFKEIHRQGNRKLRRAAMFGHVPKIKPRRNNYEGNNFNTNNFSRNREEDFSTKSSGRFDNSKPSNFNYKDNDNKKTFGGKNEDVAKKEEKLHPSWEAKKKQSGILPFQGKKIVFDES

Summary

Pfam
PF09073   BUD22
Interpro
IPR015158   Bud22_dom        + More
IPR037393   Bud22/SRFB1       

Ontologies

GO

Topology

Length:
440
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00378
outside
1  -  440
 
 

Population Genetic Test Statistics

Pi
19.837037
Theta
19.148906
Tajima's D
-0.590474
CLR
4.429058
CSRT
0.221738913054347
Interpretation
Uncertain
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