Gene

KWMTBOMO12706  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001991

Annotation

ribosomal_protein_L36_[Bombyx_mori]

Location

Bomo_Chr21(-):12650332-12653831      View in EpiBrowser

Full name

60S ribosomal protein L36      

Location in the cell

Nuclear   Reliability : 2.784

CDS

ATGGCCCCTCGTTTTGAAATCGCAGTAGGCCTGCGAAAAGGCCACAAAACAACTAAAATATCCGCTGGCCGCAAGGGTATCACAGACAAAGCCATCAGAATTAGGCCAGCTAGACTAAAGGGTCTTCAAACGAAACACTCCAAGTTTGTCCGTGATTTAGTACGCGAAGTTGTCGGACACGCTCAATATGAGAAGAGGGCTATGGAGTTACTTAAGGTGTCAAAAGACAAGCGTGCTCTGAAGTTCTTGAAGCGACGATTGGGCACACACATCCGCGCCAAGAGGAAGCGTGAAGAACTTAGCAACGTGCTCGCTCAGATGAGGAAGGCAGCCGCCCAGGCTCATCACCATCACCATTAA

Protein

MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAAAQAHHHHH

Similarity

Belongs to the eukaryotic ribosomal protein eL36 family.

Uniprot

A0A3G1T1P4   Q5UAQ2   A0A437B366   D1LYJ3   Q6F471   I4DLX8   + More
A0A0N1IQ63   I4DIY0   A0A2A4JUL0   A0A1E1WF86   A0A1E1WKD1   A0A212ERF9   E3UKP0   Q962S8   E7DZ33   S4NR07   G0ZEF1   A0A0L7KQN9   Q4GXA0   A0A0P4W0F3   G1K0B9   A0A069DVL3   V5GUW8   A0A1B6KCV5   A0A2J7R527   D6WGL1   A0A0V0G460   J3JTA9   A0A171B7X4   D1M812   A0A067RJG0   A0A0X8NRI3   Q4GX97   A0A1B6GVC8   A0A2P8Y9M2   A0A1B6H826   Q4GX98   A0A1W4X4W4   A0A023FA04   A0A1Y1MEI1   A0A0B4J2R9   A0A0J7K3W3   C4PLF3   Q4GX99   A0A0T6B8I0   E2AQZ7   A0A348G687   E2BWJ2   A0A026W1J8   A0A084VH64   A0A0A9YK59   A0A1S3DPA6   A0A0B4J2P3   A0A182N4T1   A0A182QBZ4   A0A182LWF0   A0A182SUI9   A0A182VFN5   A0A182JQM8   A0A182TP76   A0A182VRQ1   A0A182XHG7   A0A182LG55   Q7PQY8   A0A182RVA3   A0A182HTX9   A0A182XV23   E0VZW1   A0A0L7QQ34   A0A2A3ECE8   V9IGE8   A0A0M8ZMQ3   A0A310SEY8   A0A195CK68   A0A195EK57   F4WL70   A0A195BPA6   A0A195FBM9   A0A158NZI9   A0A151WRF5   A0A1B6D5Q7   B8RIU7   A0A182JLA5   E2C792   A0A182PQ07   A0A154PEQ8   A0A151X6X4   R4WRJ9   Q1HR17   A0A023ED66   A0A336KJS6   T1E781   A0A2M3YXH3   A0A2M3ZZ08   W5JMT0   A0A182F7B9   A0A1D1Z646   B6DDS3   Q56FF4   Q17HK5  

Pubmed

19121390    22651552    26354079    22118469    14668217    23622113    + More
26227816    27129103    21736942    26334808    18362917    19820115    22516182    23537049    24845553    29403074    25474469    28004739    20075255    19405973    20798317    24508170    30249741    24438588    25401762    26823975    20966253    12364791    14747013    17210077    25244985    20566863    21719571    21347285    23691247    17204158    17510324    24945155    26483478    20920257    23761445    19178717   

EMBL

MG992461    AXY94899.1    BABH01016033    BABH01016034    BABH01016035    AY769306    + More
AAV34848.1    RSAL01000186    RVE44799.1    GU084267    ACY95300.1    AB180419    BAD26663.1    AK402296    BAM18918.1    KQ459762    KPJ20128.1    AK401248    KQ459193    BAM17870.1    KPJ03079.1    NWSH01000587    PCG75489.1    GDQN01005429    JAT85625.1    GDQN01003619    JAT87435.1    AGBW02013021    OWR44082.1    HM449914    ADO33049.1    AF400198    ODYU01005874    AAK92170.1    SOQ47207.1    HQ424736    ADT80680.1    GAIX01014637    JAA77923.1    JF265029    AEL28860.1    JTDY01006904    KOB65602.1    AM049123    CAJ17423.1    GDKW01000252    JAI56343.1    ACPB03017557    JO495000    GAHY01000968    AEL79230.1    JAA76542.1    GBGD01003545    JAC85344.1    GALX01000542    JAB67924.1    GEBQ01030742    GEBQ01023952    JAT09235.1    JAT16025.1    NEVH01007395    PNF35941.1    KQ971321    EFA00163.1    GECL01003652    JAP02472.1    APGK01041368    BT126465    KB740993    KB632256    AEE61429.1    ENN76055.1    ERL90726.1    GEMB01000168    JAS02945.1    GU120436    ACY71286.1    KK852433    KDR23957.1    KC507360    AHB12483.1    AM049126    CAJ17426.1    GECZ01003466    JAS66303.1    PYGN01000775    PSN40959.1    GECU01036884    JAS70822.1    AM049125    CAJ17425.1    GBBI01000883    JAC17829.1    GEZM01033619    JAV84212.1    AAZX01012922    LBMM01014825    KMQ85032.1    FM253354    CAR94544.1    AM049124    CAJ17424.1    LJIG01009220    KRT83515.1    GL441846    EFN64143.1    FX985629    BBF97960.1    GL451131    EFN79948.1    KK107488    QOIP01000012    EZA49937.1    RLU15737.1    ATLV01013145    KE524842    KFB37308.1    GBHO01013684    GBRD01013040    GDHC01008897    JAG29920.1    JAG52786.1    JAQ09732.1    AXCN02000013    AXCM01000997    AAAB01008859    EAA08114.5    APCN01000591    DS235854    EEB18917.1    KQ414792    KOC60748.1    KZ288285    PBC29453.1    JR043229    AEY59742.1    KQ438527    KOX67227.1    KQ760551    OAD59851.1    KQ977720    KYN00469.1    KQ978747    KYN28650.1    GL888207    EGI65033.1    KQ976433    KYM87287.1    KQ981685    KYN38030.1    ADTU01004645    KQ982807    KYQ50387.1    GEDC01016280    JAS21018.1    EZ000371    ACJ64245.1    GL453340    EFN76205.1    KQ434889    KZC10329.1    KQ982476    KYQ56038.1    AK417317    BAN20532.1    DQ440277    CH477186    ABF18310.1    EAT48985.1    JXUM01148008    GAPW01006225    KQ570486    JAC07373.1    KXJ68352.1    UFQS01000590    UFQT01000590    SSX05174.1    SSX25535.1    GAMD01003277    JAA98313.1    GGFM01000187    MBW20938.1    GGFK01000420    MBW33741.1    ADMH02001070    GGFL01004249    ETN64210.1    MBW68427.1    GDJX01005590    JAT62346.1    EU934283    ACI30061.1    AY961546    AAX62448.1    CH477247    EAT46152.1   

Proteomes

UP000005204    UP000283053    UP000053240    UP000053268    UP000218220    UP000007151    + More
UP000037510    UP000015103    UP000235965    UP000007266    UP000019118    UP000030742    UP000027135    UP000245037    UP000192223    UP000002358    UP000036403    UP000000311    UP000008237    UP000053097    UP000279307    UP000030765    UP000079169    UP000005203    UP000075884    UP000075886    UP000075883    UP000075901    UP000075903    UP000075881    UP000075902    UP000075920    UP000076407    UP000075882    UP000007062    UP000075900    UP000075840    UP000076408    UP000009046    UP000053825    UP000242457    UP000053105    UP000078542    UP000078492    UP000007755    UP000078540    UP000078541    UP000005205    UP000075809    UP000075880    UP000075885    UP000076502    UP000008820    UP000069940    UP000249989    UP000000673    UP000069272   

PRIDE

Q5UAQ2   

Pfam

PF01158   Ribosomal_L36e

Interpro

IPR000509   Ribosomal_L36e        + More
IPR038097   L36e_sf       

Gene 3D

1.10.10.1760    

ProteinModelPortal

A0A3G1T1P4   Q5UAQ2   A0A437B366   D1LYJ3   Q6F471   I4DLX8   + More
A0A0N1IQ63   I4DIY0   A0A2A4JUL0   A0A1E1WF86   A0A1E1WKD1   A0A212ERF9   E3UKP0   Q962S8   E7DZ33   S4NR07   G0ZEF1   A0A0L7KQN9   Q4GXA0   A0A0P4W0F3   G1K0B9   A0A069DVL3   V5GUW8   A0A1B6KCV5   A0A2J7R527   D6WGL1   A0A0V0G460   J3JTA9   A0A171B7X4   D1M812   A0A067RJG0   A0A0X8NRI3   Q4GX97   A0A1B6GVC8   A0A2P8Y9M2   A0A1B6H826   Q4GX98   A0A1W4X4W4   A0A023FA04   A0A1Y1MEI1   A0A0B4J2R9   A0A0J7K3W3   C4PLF3   Q4GX99   A0A0T6B8I0   E2AQZ7   A0A348G687   E2BWJ2   A0A026W1J8   A0A084VH64   A0A0A9YK59   A0A1S3DPA6   A0A0B4J2P3   A0A182N4T1   A0A182QBZ4   A0A182LWF0   A0A182SUI9   A0A182VFN5   A0A182JQM8   A0A182TP76   A0A182VRQ1   A0A182XHG7   A0A182LG55   Q7PQY8   A0A182RVA3   A0A182HTX9   A0A182XV23   E0VZW1   A0A0L7QQ34   A0A2A3ECE8   V9IGE8   A0A0M8ZMQ3   A0A310SEY8   A0A195CK68   A0A195EK57   F4WL70   A0A195BPA6   A0A195FBM9   A0A158NZI9   A0A151WRF5   A0A1B6D5Q7   B8RIU7   A0A182JLA5   E2C792   A0A182PQ07   A0A154PEQ8   A0A151X6X4   R4WRJ9   Q1HR17   A0A023ED66   A0A336KJS6   T1E781   A0A2M3YXH3   A0A2M3ZZ08   W5JMT0   A0A182F7B9   A0A1D1Z646   B6DDS3   Q56FF4   Q17HK5  

PDB

4V6W     E-value=3.17271e-24,     Score=270

KEGG

692708    K02920 large subunit ribosomal protein L36e | (RefSeq) RpL36; ribosomal protein L36

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0005840   GO:0003735   GO:0006412   GO:0002181   GO:0022625   GO:0005622   GO:0008270   GO:0043565   GO:0003677   GO:0004879   GO:0003707   GO:0016286  

PANTHER

PTHR10114  

Length:

119

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.09195

outside

1  -  119

 

 

Pi

2.390242

Theta

21.898317

Tajima's D

-0.984186

CLR

2.167514

CSRT

0.139143042847858

Interpretation

Uncertain